Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               3-253
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 121
               

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 62
               

               Conread position:
               3-373
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               3-390
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               73, 62
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               36-372
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               51-374
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 8
               

               Conread position:
               54-357
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               63-372
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 75
               

               Conread position:
               113-338
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               113-365
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               119-402
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               125-365
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               141-366
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               144-366
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               152-388
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               167-365
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               91, 73
               

               Conread position:
               168-383
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               11, 133
               

               Conread position:
               170-351
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               177-388
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               180-382
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 165
               

               Conread position:
               183-370
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               379-699
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               390-835
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               304
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               111, 22
               

               Conread position:
               407-832
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               291
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               417-831
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               122, 185
               

               Conread position:
               420-828
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 18
               

               Conread position:
               420-835
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               424-831
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               283
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               430-832
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               156, 73
               

               Conread position:
               433-832
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               284, 9
               

               Conread position:
               439-804
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               439-815
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               246, 81
               

               Conread position:
               444-823
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 103
               

               Conread position:
               445-835
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 6
               

               Conread position:
               467-811
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 117
               

               Conread position:
               535-833
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               538-823
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               538-835
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 114
               

               Conread position:
               547-833
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               22, 203
               

               Conread position:
               565-830
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               571-815
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               577-835
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               607-804
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 73
               

               Conread position:
               724-835
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 19
               
Show alignments to all cow chromosomes.