Cow genome map

Conread name: Ss1.1-Pig4-TMW8039P19.5

Conread position: 2-368
Cow position: chr19:54415235-54414862 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 124

Conread position: 3-254
Cow position: chr19:7591990-7591746 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 17

Conread position: 3-383
Cow position: chr19:19767104-19766718 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 57

Conread position: 3-395
Cow position: chr19:19764564-19764181 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 56

Conread position: 4-382
Cow position: chr19:2074575-2074959 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 87, 58

Conread position: 5-298
Cow position: chr19:55123769-55123476 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 21

Conread position: 55-368
Cow position: chr19:51980284-51979979 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 75-301
Cow position: chr19:43240240-43240468 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 13, 48

Conread position: 113-372
Cow position: chr19:10367227-10366965 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 54

Conread position: 113-372
Cow position: chr19:11433795-11434069 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 37

Conread position: 113-373
Cow position: chr19:7581665-7581403 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 20, 54

Conread position: 113-374
Cow position: chr19:22166023-22165766 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 36, 53

Conread position: 115-339
Cow position: chr19:24225925-24225691 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 172

Conread position: 115-372
Cow position: chr19:18629113-18628852 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 52

Conread position: 124-366
Cow position: chr19:8770863-8770622 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 26, 43

Conread position: 141-366
Cow position: chr19:12124655-12124876 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 198, 7

Conread position: 167-373
Cow position: chr19:13222962-13223167 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 97

Conread position: 168-334
Cow position: chr19:26017605-26017438 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 59

Conread position: 168-370
Cow position: chr19:47321008-47321202 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 42

Conread position: 168-372
Cow position: chr19:20417741-20417539 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 113

Conread position: 168-372
Cow position: chr19:45590418-45590217 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 110

Conread position: 178-373
Cow position: chr19:27833281-27833481 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 134

Conread position: 181-372
Cow position: chr19:6489250-6489054 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 170

Conread position: 391-626
Cow position: chr19:49680252-49680028 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 178, 21

Conread position: 391-816
Cow position: chr19:31669627-31670031 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 290
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 174, 22

Conread position: 414-652
Cow position: chr19:39773077-39773325 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 169

Conread position: 415-831
Cow position: chr19:14964004-14963614 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 267
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 227, 13

Conread position: 420-680
Cow position: chr19:23190349-23190613 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 168

Conread position: 420-809
Cow position: chr19:38463539-38463903 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 149, 18

Conread position: 422-835
Cow position: chr19:48340206-48340608 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 280
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 27

Conread position: 439-666
Cow position: chr19:4134615-4134840 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 82

Conread position: 439-832
Cow position: chr19:3510160-3509778 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 90

Conread position: 455-832
Cow position: chr19:32440783-32441144 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 232, 20

Conread position: 467-831
Cow position: chr19:36482062-36482432 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 45

Conread position: 469-830
Cow position: chr19:26709588-26709939 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 231
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 277, 88

Conread position: 515-832
Cow position: chr19:36693278-36692976 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 39

Conread position: 547-830
Cow position: chr19:5131653-5131375 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 24, 91

Conread position: 547-832
Cow position: chr19:45041756-45041479 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 52

Conread position: 559-829
Cow position: chr19:26241149-26240875 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 52

Conread position: 559-832
Cow position: chr19:6014679-6014945 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 71

Conread position: 562-832
Cow position: chr19:30908098-30908360 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 133, 61

Conread position: 583-832
Cow position: chr19:33157863-33157616 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 89

Conread position: 593-835
Cow position: chr19:16569092-16569342 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 84

Conread position: 612-840
Cow position: chr19:46662286-46662503 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 106, 53

Conread position: 690-815
Cow position: chr19:31668444-31668571 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 50

Show alignments to all cow chromosomes.