Cow genome map

Conread name: Ss1.1-Pig4-TMW8039P19.5

Conread position: 2-370
Cow position:
Alignm length: 378
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 21

Conread position: 3-367
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 82, 28

Conread position: 3-372
Cow position:
Alignm length: 390
Alignm identity: 268
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 70, 61

Conread position: 3-374
Cow position:
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 56

Conread position: 3-382
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 62

Conread position: 3-401
Cow position:
Alignm length: 411
Alignm identity: 274
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 61

Conread position: 5-373
Cow position:
Alignm length: 382
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 102, 39

Conread position: 5-374
Cow position:
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 57

Conread position: 8-396
Cow position:
Alignm length: 396
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 26

Conread position: 13-303
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 78, 51

Conread position: 15-374
Cow position:
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 11

Conread position: 39-231
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 26

Conread position: 39-323
Cow position:
Alignm length: 291
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 25

Conread position: 39-387
Cow position:
Alignm length: 357
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 25

Conread position: 58-370
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 100

Conread position: 80-374
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 87

Conread position: 102-383
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 65

Conread position: 106-387
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 43, 61

Conread position: 113-303
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 54

Conread position: 113-372
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 54

Conread position: 113-372
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 67

Conread position: 113-374
Cow position:
Alignm length: 269
Alignm identity: 199
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 53

Conread position: 113-374
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 54

Conread position: 113-388
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 40

Conread position: 113-412
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 53

Conread position: 114-372
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 54

Conread position: 114-372
Cow position:
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 49

Conread position: 115-302
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 52

Conread position: 115-372
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 34, 52

Conread position: 122-373
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 79, 13

Conread position: 122-374
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 39

Conread position: 122-383
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 79, 13

Conread position: 140-401
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 111, 8

Conread position: 141-337
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 7

Conread position: 141-367
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 7

Conread position: 141-372
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 141-372
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 7

Conread position: 141-372
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 200, 8

Conread position: 141-374
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 110, 7

Conread position: 141-374
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 13

Conread position: 141-391
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 84, 7

Conread position: 167-373
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 34, 137

Conread position: 167-383
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 145

Conread position: 168-330
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 111

Conread position: 168-368
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 44

Conread position: 168-373
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 116

Conread position: 168-374
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 59

Conread position: 168-387
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 168-388
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 167

Conread position: 170-372
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 116

Conread position: 178-374
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 180-323
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 122

Conread position: 180-373
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 6

Conread position: 182-355
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 98

Conread position: 183-370
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 184-371
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 33

Conread position: 190-372
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 55

Conread position: 190-383
Cow position:
Alignm length: 200
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 83

Conread position: 219-401
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 179

Conread position: 391-580
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 63

Conread position: 394-801
Cow position:
Alignm length: 416
Alignm identity: 285
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 56, 10

Conread position: 406-800
Cow position:
Alignm length: 400
Alignm identity: 262
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 47

Conread position: 414-827
Cow position:
Alignm length: 419
Alignm identity: 275
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 87, 38

Conread position: 414-831
Cow position:
Alignm length: 426
Alignm identity: 282
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 41, 14

Conread position: 414-832
Cow position:
Alignm length: 422
Alignm identity: 272
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 293, 114

Conread position: 414-832
Cow position:
Alignm length: 427
Alignm identity: 274
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 90, 13

Conread position: 414-832
Cow position:
Alignm length: 437
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 201

Conread position: 415-600
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 113

Conread position: 415-708
Cow position:
Alignm length: 300
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 86, 181

Conread position: 415-801
Cow position:
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 105

Conread position: 422-832
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 142

Conread position: 424-830
Cow position:
Alignm length: 416
Alignm identity: 279
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 16, 27

Conread position: 425-831
Cow position:
Alignm length: 417
Alignm identity: 278
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 79, 64

Conread position: 428-675
Cow position:
Alignm length: 249
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 152

Conread position: 428-831
Cow position:
Alignm length: 408
Alignm identity: 266
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 131

Conread position: 428-838
Cow position:
Alignm length: 413
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 93

Conread position: 430-812
Cow position:
Alignm length: 398
Alignm identity: 268
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 142, 29

Conread position: 430-829
Cow position:
Alignm length: 407
Alignm identity: 268
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 91

Conread position: 430-838
Cow position:
Alignm length: 424
Alignm identity: 278
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 13

Conread position: 431-832
Cow position:
Alignm length: 404
Alignm identity: 258
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 287, 92

Conread position: 432-830
Cow position:
Alignm length: 406
Alignm identity: 266
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 154

Conread position: 439-803
Cow position:
Alignm length: 371
Alignm identity: 248
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 62, 27

Conread position: 439-820
Cow position:
Alignm length: 397
Alignm identity: 263
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 89

Conread position: 444-832
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 77

Conread position: 447-764
Cow position:
Alignm length: 325
Alignm identity: 219
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 34

Conread position: 447-816
Cow position:
Alignm length: 373
Alignm identity: 244
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 120, 88

Conread position: 447-835
Cow position:
Alignm length: 404
Alignm identity: 265
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 86, 203

Conread position: 458-617
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 145

Conread position: 459-831
Cow position:
Alignm length: 382
Alignm identity: 253
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 77, 189

Conread position: 460-795
Cow position:
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 28

Conread position: 466-833
Cow position:
Alignm length: 374
Alignm identity: 256
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 77

Conread position: 467-823
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 102, 53

Conread position: 473-829
Cow position:
Alignm length: 361
Alignm identity: 237
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 53

Conread position: 482-811
Cow position:
Alignm length: 332
Alignm identity: 227
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 87, 19

Conread position: 484-837
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 55, 118

Conread position: 488-832
Cow position:
Alignm length: 353
Alignm identity: 235
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 16

Conread position: 498-810
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 146

Conread position: 516-830
Cow position:
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 140

Conread position: 521-812
Cow position:
Alignm length: 297
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 18

Conread position: 533-818
Cow position:
Alignm length: 300
Alignm identity: 202
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 14

Conread position: 547-805
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 95

Conread position: 547-835
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 8

Conread position: 548-832
Cow position:
Alignm length: 287
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 137, 24

Conread position: 549-832
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 44

Conread position: 554-823
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 43

Conread position: 565-832
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 23, 133

Conread position: 578-832
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 99, 12

Conread position: 582-816
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 38

Conread position: 591-811
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 56

Conread position: 648-832
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 25

Conread position: 648-839
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 47

Conread position: 650-832
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 121

Conread position: 654-810
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 32

Conread position: 677-832
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 690-832
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 35

Conread position: 720-832
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 24

Show alignments to all cow chromosomes.