Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 61
               

               Conread position:
               3-370
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               146, 29
               

               Conread position:
               3-373
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               146, 33
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               270
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               147, 23
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               10-373
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 22
               

               Conread position:
               25-303
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               51-302
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 14
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               87, 13
               

               Conread position:
               64-403
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               34, 60
               

               Conread position:
               85-366
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 8
               

               Conread position:
               107-318
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               107-372
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               113-339
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               21, 26
               

               Conread position:
               113-383
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 24
               

               Conread position:
               115-367
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               140-372
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               115, 8
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 18
               

               Conread position:
               141-374
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 7
               

               Conread position:
               149-389
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               153-364
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               168-390
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               178-369
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               20, 166
               

               Conread position:
               181-373
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               49, 5
               

               Conread position:
               184-372
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               157, 21
               

               Conread position:
               184-407
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 121
               

               Conread position:
               185-373
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               8, 78
               

               Conread position:
               190-373
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 119
               

               Conread position:
               194-376
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 107
               

               Conread position:
               414-711
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 111
               

               Conread position:
               414-807
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               302, 7
               

               Conread position:
               415-681
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               121, 5
               

               Conread position:
               415-835
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               279
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               249, 12
               

               Conread position:
               422-781
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               123, 211
               

               Conread position:
               423-606
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               424-801
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               153, 55
               

               Conread position:
               428-809
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               275
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               58, 150
               

               Conread position:
               430-831
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 51
               

               Conread position:
               430-832
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 215
               

               Conread position:
               442-832
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               127, 55
               

               Conread position:
               445-801
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               306, 54
               

               Conread position:
               445-835
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               447-832
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               149, 65
               

               Conread position:
               491-831
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               505-837
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               40, 107
               

               Conread position:
               510-834
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 38
               

               Conread position:
               518-832
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 127
               

               Conread position:
               538-747
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               31, 207
               

               Conread position:
               538-812
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               546-832
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               35, 84
               

               Conread position:
               564-816
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               86, 48
               

               Conread position:
               583-833
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               104, 61
               

               Conread position:
               589-832
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               98, 169
               

               Conread position:
               591-835
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               595-832
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 90
               

               Conread position:
               611-833
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               690-816
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 43
               
Show alignments to all cow chromosomes.