Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-396
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               5-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               5-361
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               14-404
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               32-322
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               39-330
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               39-401
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               51-364
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               110-388
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               39, 6
               

               Conread position:
               112-387
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               113-369
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-375
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               113-391
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               115-353
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               122-383
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               124-370
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               124-444
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               141-373
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               90, 8
               

               Conread position:
               167-383
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               34, 100
               

               Conread position:
               168-367
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 115
               

               Conread position:
               168-408
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               178-374
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               184-387
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               66, 167
               

               Conread position:
               216-374
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 100
               

               Conread position:
               239-382
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               67, 96
               

               Conread position:
               365-814
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               10, 115
               

               Conread position:
               395-622
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               144, 9
               

               Conread position:
               395-626
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               409-835
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               237, 24
               

               Conread position:
               414-598
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               122, 7
               

               Conread position:
               414-782
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               153, 17
               

               Conread position:
               415-825
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               273, 10
               

               Conread position:
               415-829
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               422-832
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               267
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               163, 27
               

               Conread position:
               422-833
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 60
               

               Conread position:
               422-841
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               293
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               424-716
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               428-830
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               45, 36
               

               Conread position:
               439-673
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               439-811
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               100, 62
               

               Conread position:
               442-859
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               287
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               95, 182
               

               Conread position:
               447-832
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               450-832
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               89, 22
               

               Conread position:
               453-835
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               468-829
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               61, 79
               

               Conread position:
               469-835
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               477-680
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               52, 116
               

               Conread position:
               492-806
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               504-776
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               181, 71
               

               Conread position:
               526-832
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               538-808
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               180, 34
               

               Conread position:
               561-804
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               124, 29
               

               Conread position:
               566-832
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               576-832
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               584-813
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               103, 96
               

               Conread position:
               611-832
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               74, 132
               

               Conread position:
               648-823
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               39, 25
               
Show alignments to all cow chromosomes.