Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               138, 56
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 124
               

               Conread position:
               3-388
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               29-355
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               39-383
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               107-364
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               113-368
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               113-380
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               113-387
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-387
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               113-391
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               114-330
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 53
               

               Conread position:
               114-374
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               114-383
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               115-387
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               124-373
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               132-372
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               141-401
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               201, 7
               

               Conread position:
               144-355
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               165-383
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               63, 90
               

               Conread position:
               167-325
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               167-334
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               167-355
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 145
               

               Conread position:
               167-372
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 176
               

               Conread position:
               168-296
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               168-390
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 153
               

               Conread position:
               175-396
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               55, 129
               

               Conread position:
               181-372
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 162
               

               Conread position:
               182-368
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               183-366
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               223-370
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               391-835
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               415-831
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 14
               

               Conread position:
               424-823
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 76
               

               Conread position:
               427-807
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               75, 39
               

               Conread position:
               429-752
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               104, 162
               

               Conread position:
               430-709
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               71, 118
               

               Conread position:
               431-831
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               213, 144
               

               Conread position:
               439-815
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               128, 70
               

               Conread position:
               439-835
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 63
               

               Conread position:
               449-832
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 100
               

               Conread position:
               467-835
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               62, 174
               

               Conread position:
               507-837
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               538-832
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               591-828
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 86
               

               Conread position:
               613-832
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               635-813
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 6
               

               Conread position:
               657-816
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               685-832
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               690-816
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               691-835
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 53
               
Show alignments to all cow chromosomes.