Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039P19.5 |
| Conread position: | 3-371 |
| Cow position: | chr23:37664499-37664130 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 13-366 |
| Cow position: | chr23:10542442-10542797 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 52 |
| Conread position: | 16-372 |
| Cow position: | chr23:37712718-37713085 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 47-368 |
| Cow position: | chr23:13097517-13097197 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 51-249 |
| Cow position: | chr23:39713892-39714085 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 52-373 |
| Cow position: | chr23:41375217-41374892 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 59-385 |
| Cow position: | chr23:4829303-4828974 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 113 |
| Conread position: | 107-373 |
| Cow position: | chr23:19676534-19676800 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 110-310 |
| Cow position: | chr23:14495414-14495616 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 113-368 |
| Cow position: | chr23:26203642-26203888 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 113-372 |
| Cow position: | chr23:37975204-37974950 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 113-383 |
| Cow position: | chr23:40912744-40912478 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 167-383 |
| Cow position: | chr23:9727735-9727515 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 34, 143 |
| Conread position: | 168-303 |
| Cow position: | chr23:2537397-2537535 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 168-373 |
| Cow position: | chr23:19636976-19636770 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 181-374 |
| Cow position: | chr23:26270227-26270427 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 17, 162 |
| Conread position: | 190-401 |
| Cow position: | chr23:31557807-31558021 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 202 |
| Conread position: | 384-832 |
| Cow position: | chr23:8444718-8444279 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 299 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 392-807 |
| Cow position: | chr23:38401550-38401115 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 408-831 |
| Cow position: | chr23:30751192-30750796 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 161, 125 |
| Conread position: | 417-835 |
| Cow position: | chr23:5866294-5866715 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 156 |
| Conread position: | 423-831 |
| Cow position: | chr23:14518749-14519153 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 68 |
| Conread position: | 447-835 |
| Cow position: | chr23:34422940-34422548 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 243 |
| Conread position: | 458-783 |
| Cow position: | chr23:37247609-37247930 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 468-702 |
| Cow position: | chr23:14097608-14097841 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 479-815 |
| Cow position: | chr23:35451167-35450827 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 538-829 |
| Cow position: | chr23:36414580-36414867 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 543-832 |
| Cow position: | chr23:35980373-35980649 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 546-832 |
| Cow position: | chr23:3974504-3974798 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 547-835 |
| Cow position: | chr23:38540909-38540624 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 579-829 |
| Cow position: | chr23:32529106-32528850 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 591-833 |
| Cow position: | chr23:19730612-19730367 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 72 |
| Conread position: | 620-816 |
| Cow position: | chr23:36393150-36393350 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 631-835 |
| Cow position: | chr23:5218315-5218108 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 648-832 |
| Cow position: | chr23:13135753-13135936 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 652-831 |
| Cow position: | chr23:12281468-12281637 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 35, 67 |
| Conread position: | 671-832 |
| Cow position: | chr23:28954899-28955062 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 685-832 |
| Cow position: | chr23:14462231-14462380 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 57 |
Show alignments to all cow chromosomes.