Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039P19.5 |
| Conread position: | 1-368 |
| Cow position: | chr24:27254394-27254030 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 63 |
| Conread position: | 3-217 |
| Cow position: | chr24:24646276-24646064 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 3-368 |
| Cow position: | chr24:27333240-27332882 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 89, 52 |
| Conread position: | 3-372 |
| Cow position: | chr24:6089282-6088914 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 3-374 |
| Cow position: | chr24:17844824-17845199 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 58-364 |
| Cow position: | chr24:42009363-42009055 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 168 |
| Conread position: | 59-407 |
| Cow position: | chr24:6073627-6073283 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 6 |
| Conread position: | 64-368 |
| Cow position: | chr24:26680244-26680543 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 68-373 |
| Cow position: | chr24:31203733-31204038 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 113-373 |
| Cow position: | chr24:319193-318924 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 113-373 |
| Cow position: | chr24:35553023-35553277 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 145, 41 |
| Conread position: | 141-372 |
| Cow position: | chr24:9096128-9096349 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 141-384 |
| Cow position: | chr24:36906152-36906388 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 167-373 |
| Cow position: | chr24:29356033-29356245 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 176 |
| Conread position: | 167-391 |
| Cow position: | chr24:40524094-40524323 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 139 |
| Conread position: | 168-374 |
| Cow position: | chr24:2448302-2448092 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 168-374 |
| Cow position: | chr24:9167000-9167200 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 168-381 |
| Cow position: | chr24:36836406-36836191 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 35, 171 |
| Conread position: | 168-383 |
| Cow position: | chr24:5917381-5917600 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 33, 142 |
| Conread position: | 178-372 |
| Cow position: | chr24:245986-246173 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 191-392 |
| Cow position: | chr24:26874448-26874653 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 234-374 |
| Cow position: | chr24:33445867-33445727 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 391-737 |
| Cow position: | chr24:35710478-35710139 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 414-776 |
| Cow position: | chr24:7182049-7182405 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 420-638 |
| Cow position: | chr24:14953728-14953949 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 421-831 |
| Cow position: | chr24:23158271-23157874 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 80, 147 |
| Conread position: | 423-835 |
| Cow position: | chr24:37846460-37846879 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 142, 96 |
| Conread position: | 429-776 |
| Cow position: | chr24:23416990-23417340 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 439-811 |
| Cow position: | chr24:22938340-22938705 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 130, 58 |
| Conread position: | 439-831 |
| Cow position: | chr24:37249961-37250362 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 83 |
| Conread position: | 439-835 |
| Cow position: | chr24:43443370-43442969 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 65, 10 |
| Conread position: | 441-598 |
| Cow position: | chr24:9770791-9770950 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 447-809 |
| Cow position: | chr24:38177090-38177443 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 54, 102 |
| Conread position: | 449-831 |
| Cow position: | chr24:13065253-13064869 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 537-835 |
| Cow position: | chr24:39927933-39928225 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 560-817 |
| Cow position: | chr24:35314013-35313749 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 125, 28 |
| Conread position: | 575-835 |
| Cow position: | chr24:34392993-34393247 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 102 |
| Conread position: | 612-807 |
| Cow position: | chr24:39691885-39691702 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 690-832 |
| Cow position: | chr24:43010692-43010548 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 113 |
Show alignments to all cow chromosomes.