Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039P19.5 |
| Conread position: | 3-344 |
| Cow position: | chr26:11989035-11989381 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 3-373 |
| Cow position: | chr26:29776322-29775956 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 29 |
| Conread position: | 3-397 |
| Cow position: | chr26:18847496-18847889 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 29 |
| Conread position: | 3-401 |
| Cow position: | chr26:12264436-12264051 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 15-327 |
| Cow position: | chr26:2921293-2921619 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 52-391 |
| Cow position: | chr26:15627423-15627096 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 56-370 |
| Cow position: | chr26:7062012-7062325 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 81, 76 |
| Conread position: | 110-374 |
| Cow position: | chr26:31954394-31954130 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 113-326 |
| Cow position: | chr26:11823726-11823510 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 113-339 |
| Cow position: | chr26:28459042-28458810 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 114-330 |
| Cow position: | chr26:24954527-24954746 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 114-372 |
| Cow position: | chr26:1542499-1542750 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 122-373 |
| Cow position: | chr26:11054172-11054415 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 141-372 |
| Cow position: | chr26:19167740-19167507 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 7 |
| Conread position: | 165-374 |
| Cow position: | chr26:12886397-12886181 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 179 |
| Conread position: | 168-397 |
| Cow position: | chr26:34782484-34782251 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 62, 137 |
| Conread position: | 178-335 |
| Cow position: | chr26:10990466-10990308 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 178-364 |
| Cow position: | chr26:20978260-20978069 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 178-371 |
| Cow position: | chr26:27156663-27156476 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 66 |
| Conread position: | 184-374 |
| Cow position: | chr26:6604977-6605158 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 196-383 |
| Cow position: | chr26:28697419-28697233 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 250-373 |
| Cow position: | chr26:22024010-22023887 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 377-832 |
| Cow position: | chr26:18515424-18515879 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 420-816 |
| Cow position: | chr26:27520263-27520652 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 420-832 |
| Cow position: | chr26:19865277-19864882 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 420-835 |
| Cow position: | chr26:19312232-19311827 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 149 |
| Conread position: | 422-835 |
| Cow position: | chr26:15662176-15662580 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 102 |
| Conread position: | 428-785 |
| Cow position: | chr26:14070047-14070409 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 140, 53 |
| Conread position: | 439-794 |
| Cow position: | chr26:15245251-15244908 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 439-832 |
| Cow position: | chr26:15160328-15160708 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 207, 62 |
| Conread position: | 441-811 |
| Cow position: | chr26:19761292-19760943 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 450-797 |
| Cow position: | chr26:21727178-21727526 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 97, 128 |
| Conread position: | 460-835 |
| Cow position: | chr26:26962456-26962090 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 107, 82 |
| Conread position: | 468-683 |
| Cow position: | chr26:35278576-35278791 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 471-816 |
| Cow position: | chr26:8613258-8612909 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 473-805 |
| Cow position: | chr26:4375193-4374856 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 538-803 |
| Cow position: | chr26:12183673-12183938 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 542-833 |
| Cow position: | chr26:32936128-32935836 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 547-798 |
| Cow position: | chr26:11829886-11830141 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 564-835 |
| Cow position: | chr26:19652121-19652393 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 670-835 |
| Cow position: | chr26:35279086-35279250 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 24 |
Show alignments to all cow chromosomes.