Cow genome map

Conread name: Ss1.1-Pig4-TMW8039P19.5

Conread position: 3-323
Cow position: chr29:30723308-30723625 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 90, 62

Conread position: 3-366
Cow position: chr29:33434940-33435311 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 61

Conread position: 3-372
Cow position: chr29:30691360-30690988 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 254
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 8, 30

Conread position: 3-383
Cow position: chr29:5624395-5624778 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 47

Conread position: 3-387
Cow position: chr29:12897387-12897018 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 227, 29

Conread position: 3-387
Cow position: chr29:28847371-28846984 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 61

Conread position: 5-388
Cow position: chr29:28794554-28794941 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 59

Conread position: 32-368
Cow position: chr29:15852347-15852675 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 33

Conread position: 32-372
Cow position: chr29:6389673-6390016 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 51-372
Cow position: chr29:36638631-36638944 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 82, 14

Conread position: 69-334
Cow position: chr29:5523177-5523441 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 46

Conread position: 77-390
Cow position: chr29:18183169-18182861 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 64, 90

Conread position: 85-338
Cow position: chr29:31236299-31236556 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 14

Conread position: 113-372
Cow position: chr29:38051278-38051016 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 32

Conread position: 113-404
Cow position: chr29:11449963-11449671 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 36, 53

Conread position: 113-408
Cow position: chr29:26596806-26597099 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 118-336
Cow position: chr29:30715014-30714800 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 45

Conread position: 123-372
Cow position: chr29:42198803-42198556 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 18

Conread position: 148-330
Cow position: chr29:2199102-2198935 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 150-339
Cow position: chr29:31218565-31218748 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 15

Conread position: 168-396
Cow position: chr29:8940821-8940592 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 93

Conread position: 178-347
Cow position: chr29:44130802-44130975 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 34

Conread position: 183-374
Cow position: chr29:20706483-20706674 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 159
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 7

Conread position: 190-383
Cow position: chr29:32844713-32844518 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 192-368
Cow position: chr29:30690291-30690466 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 139

Conread position: 238-374
Cow position: chr29:16897607-16897472 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 414-814
Cow position: chr29:19043553-19043173 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 270
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 122, 13

Conread position: 422-686
Cow position: chr29:39218101-39217839 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 27

Conread position: 430-835
Cow position: chr29:24012316-24011934 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 264
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 138, 52

Conread position: 440-832
Cow position: chr29:31340564-31340963 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 270
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 28

Conread position: 447-814
Cow position: chr29:5169281-5169643 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 235
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 101

Conread position: 452-832
Cow position: chr29:29192951-29192589 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 235, 25

Conread position: 458-741
Cow position: chr29:34005941-34005669 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 50

Conread position: 459-832
Cow position: chr29:21519107-21519463 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 249
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 63

Conread position: 459-835
Cow position: chr29:33594215-33594587 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 42, 62

Conread position: 467-832
Cow position: chr29:28629368-28629729 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 28

Conread position: 478-812
Cow position: chr29:12415592-12415921 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 114

Conread position: 496-831
Cow position: chr29:11256307-11255978 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 132

Conread position: 528-740
Cow position: chr29:28510567-28510784 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 130

Conread position: 543-789
Cow position: chr29:27692458-27692214 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 144, 34

Conread position: 546-828
Cow position: chr29:8894634-8894916 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 100

Conread position: 561-814
Cow position: chr29:24146168-24146428 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 29, 85

Conread position: 584-799
Cow position: chr29:8876951-8876733 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 26, 64

Conread position: 685-828
Cow position: chr29:5905054-5905198 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 57

Conread position: 697-835
Cow position: chr29:36298120-36297982 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 79

Show alignments to all cow chromosomes.