Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               2-374
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               3-251
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               3-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               146, 17
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               3-373
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               3-388
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               146, 62
               

               Conread position:
               5-330
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               5-401
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               5-406
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               22-391
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               275
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               23-236
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               36-401
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               39-368
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               51-406
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               59-404
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               65-280
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               71-383
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 14
               

               Conread position:
               101-370
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               32, 50
               

               Conread position:
               113-314
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-339
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               113-370
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               113-387
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               113-405
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               114-364
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               114-365
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               114-367
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               5, 38
               

               Conread position:
               125-372
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               140-372
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 19
               

               Conread position:
               140-387
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 10
               

               Conread position:
               141-367
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               198, 18
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               78, 8
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 17
               

               Conread position:
               150-367
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               189, 15
               

               Conread position:
               167-323
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               167-382
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               167-383
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               34, 145
               

               Conread position:
               167-387
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               66, 105
               

               Conread position:
               168-327
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               168-362
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 141
               

               Conread position:
               168-374
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               168-374
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               168-387
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               169-368
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               42, 87
               

               Conread position:
               169-369
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               172, 54
               

               Conread position:
               169-374
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               175-372
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               48, 108
               

               Conread position:
               178-371
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               178-386
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               182-335
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               182-373
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               186-372
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               231-374
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               391-805
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               397-835
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 23
               

               Conread position:
               406-617
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               17, 173
               

               Conread position:
               408-633
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               160, 11
               

               Conread position:
               412-835
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 13
               

               Conread position:
               414-616
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               414-828
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               155, 61
               

               Conread position:
               414-887
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               311
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               125, 51
               

               Conread position:
               416-629
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               113, 142
               

               Conread position:
               416-832
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               419-832
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 154
               

               Conread position:
               420-831
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               174, 78
               

               Conread position:
               422-680
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 103
               

               Conread position:
               424-786
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               115, 25
               

               Conread position:
               439-657
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               133, 92
               

               Conread position:
               439-817
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               58, 69
               

               Conread position:
               440-832
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               64, 83
               

               Conread position:
               447-789
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               133, 53
               

               Conread position:
               450-832
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               117, 74
               

               Conread position:
               450-832
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 98
               

               Conread position:
               452-829
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               61, 150
               

               Conread position:
               458-807
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               78, 96
               

               Conread position:
               459-832
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 83
               

               Conread position:
               468-803
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               61, 124
               

               Conread position:
               487-804
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               507-832
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               139, 40
               

               Conread position:
               541-812
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               543-828
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               553-832
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               554-835
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               57, 25
               

               Conread position:
               558-813
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               559-832
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               564-832
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               584-806
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               103, 61
               

               Conread position:
               591-831
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               591-833
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               592-832
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               86, 92
               

               Conread position:
               592-832
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               10, 91
               
Show alignments to all cow chromosomes.