Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-292
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               3-366
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               3-369
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               3-371
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               3-388
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               4-388
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 28
               

               Conread position:
               5-390
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               268
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               87, 129
               

               Conread position:
               15-383
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 25
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               51-372
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               85-408
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               91-373
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               93-368
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               40, 7
               

               Conread position:
               106-368
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               8, 63
               

               Conread position:
               113-337
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               113-368
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               113-372
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               113-372
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               117, 35
               

               Conread position:
               113-382
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               113-401
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               114-307
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 54
               

               Conread position:
               115-374
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               118-401
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               122-383
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               92, 11
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               143-372
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 5
               

               Conread position:
               148-372
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               167-369
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 142
               

               Conread position:
               167-373
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               167-383
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               168-272
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               168-383
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               168-383
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               28, 139
               

               Conread position:
               182-373
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               183-335
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               201-358
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               213-374
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 46
               

               Conread position:
               414-832
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               287
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               415-616
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               416-626
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               169, 68
               

               Conread position:
               416-791
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               416-807
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               7, 110
               

               Conread position:
               417-832
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 179
               

               Conread position:
               417-832
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               286
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               420-835
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 41
               

               Conread position:
               422-705
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               125, 37
               

               Conread position:
               422-832
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               278
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               424-805
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               294, 80
               

               Conread position:
               428-605
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               428-699
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               218, 57
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 97
               

               Conread position:
               428-835
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               119, 82
               

               Conread position:
               428-839
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               430-835
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               145, 65
               

               Conread position:
               438-835
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               97, 12
               

               Conread position:
               439-802
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               439-818
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               62, 36
               

               Conread position:
               439-832
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               440-812
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               61, 130
               

               Conread position:
               441-812
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 118
               

               Conread position:
               442-832
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 40
               

               Conread position:
               452-831
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               453-780
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               70, 167
               

               Conread position:
               458-816
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               280, 86
               

               Conread position:
               460-805
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               467-856
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               69, 82
               

               Conread position:
               468-816
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 77
               

               Conread position:
               497-832
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 260
               

               Conread position:
               538-816
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               32, 52
               

               Conread position:
               540-835
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 38
               

               Conread position:
               542-811
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               546-832
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               33, 166
               

               Conread position:
               564-798
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 32
               

               Conread position:
               564-809
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               82, 63
               

               Conread position:
               591-832
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               591-835
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 81
               

               Conread position:
               592-821
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               597-835
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               609-832
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 32
               

               Conread position:
               651-831
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               651-835
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               690-832
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               690-832
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 56
               

               Conread position:
               691-835
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               62, 27
               
Show alignments to all cow chromosomes.