Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 62
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 61
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               283
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               32-390
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               47-383
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               51-373
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               140, 35
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-378
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               113-388
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               114-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               114-373
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               118-365
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               124-372
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               140-371
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               93, 8
               

               Conread position:
               141-367
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               141-370
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               141-383
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               161-364
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               165-351
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 145
               

               Conread position:
               167-338
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               67, 117
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 114
               

               Conread position:
               168-387
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 219
               

               Conread position:
               168-394
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               168-408
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               60, 136
               

               Conread position:
               186-398
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               387-835
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               114, 140
               

               Conread position:
               391-789
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 68
               

               Conread position:
               391-830
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               391-830
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 135
               

               Conread position:
               394-828
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               114, 138
               

               Conread position:
               396-807
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               289, 66
               

               Conread position:
               396-832
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               398-832
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               287, 15
               

               Conread position:
               410-733
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 114
               

               Conread position:
               411-832
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               414-617
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               146, 24
               

               Conread position:
               415-835
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               86, 5
               

               Conread position:
               420-835
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               428-776
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               19, 101
               

               Conread position:
               428-828
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               428-831
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               76, 90
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               120, 93
               

               Conread position:
               430-804
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               101, 124
               

               Conread position:
               433-835
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               439-835
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               440-836
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               11, 54
               

               Conread position:
               443-729
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               445-702
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               447-831
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               89, 68
               

               Conread position:
               447-835
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               266
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               118, 54
               

               Conread position:
               459-831
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               263, 74
               

               Conread position:
               469-835
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               76, 161
               

               Conread position:
               482-832
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 35
               

               Conread position:
               486-705
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 100
               

               Conread position:
               492-832
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 214
               

               Conread position:
               504-813
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 91
               

               Conread position:
               504-813
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 91
               

               Conread position:
               506-830
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               513-835
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               133, 29
               

               Conread position:
               526-831
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 120
               

               Conread position:
               528-800
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 271
               

               Conread position:
               533-740
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 188
               

               Conread position:
               535-833
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               542-832
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               543-832
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               26, 125
               

               Conread position:
               546-811
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               559-816
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               32, 81
               

               Conread position:
               561-832
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               120, 66
               

               Conread position:
               576-811
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               148, 67
               

               Conread position:
               582-815
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               136, 78
               

               Conread position:
               584-816
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 92
               

               Conread position:
               586-832
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 117
               

               Conread position:
               587-832
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               591-832
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 82
               

               Conread position:
               592-835
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               609-832
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               113, 69
               

               Conread position:
               609-835
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               614-814
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               103, 127
               

               Conread position:
               657-824
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               667-835
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 90
               

               Conread position:
               684-814
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               685-817
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               690-808
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               690-829
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               690-835
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.