Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               2-401
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               226, 42
               

               Conread position:
               3-371
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               264
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 29
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               22, 122
               

               Conread position:
               3-373
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 28
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               3-402
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               4-374
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 61
               

               Conread position:
               5-372
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               20-374
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 38
               

               Conread position:
               32-393
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               71-320
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               100-373
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               107-355
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               107-388
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               7, 42
               

               Conread position:
               109-387
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 58
               

               Conread position:
               112-380
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 55
               

               Conread position:
               113-335
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               113-372
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               20, 24
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               114-367
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               114-426
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               197, 7
               

               Conread position:
               148-401
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               165-363
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 176
               

               Conread position:
               167-383
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               167-383
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 139
               

               Conread position:
               168-335
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               21, 132
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               66, 116
               

               Conread position:
               168-374
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               61, 142
               

               Conread position:
               170-383
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               178-403
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 215
               

               Conread position:
               180-374
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               18, 163
               

               Conread position:
               181-372
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 102
               

               Conread position:
               181-374
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 161
               

               Conread position:
               182-367
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 85
               

               Conread position:
               185-370
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-364
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               216-374
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               390-675
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 29
               

               Conread position:
               390-788
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               268
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               176, 34
               

               Conread position:
               391-832
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               294
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               32, 134
               

               Conread position:
               391-832
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               104, 21
               

               Conread position:
               412-823
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               412-832
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 108
               

               Conread position:
               413-832
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 7
               

               Conread position:
               414-616
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               111, 7
               

               Conread position:
               415-835
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               86, 6
               

               Conread position:
               415-835
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               417-835
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               420-823
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               420-832
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               422-616
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               146, 39
               

               Conread position:
               422-699
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               428-756
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 121
               

               Conread position:
               428-828
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               252, 80
               

               Conread position:
               430-776
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               430-832
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               278
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               138, 68
               

               Conread position:
               430-835
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               319, 90
               

               Conread position:
               433-832
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               11, 121
               

               Conread position:
               438-832
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 92
               

               Conread position:
               439-703
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               120, 135
               

               Conread position:
               439-710
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               122, 11
               

               Conread position:
               440-678
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               442-835
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 78
               

               Conread position:
               446-832
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               126, 74
               

               Conread position:
               447-832
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               265
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               454-823
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               270, 8
               

               Conread position:
               468-835
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               68, 33
               

               Conread position:
               469-812
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               60, 163
               

               Conread position:
               482-832
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               47, 239
               

               Conread position:
               485-638
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               506-832
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               33, 50
               

               Conread position:
               507-833
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 139
               

               Conread position:
               535-709
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               536-832
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               31, 130
               

               Conread position:
               546-816
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               571-832
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               233, 25
               

               Conread position:
               577-831
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               141, 27
               

               Conread position:
               578-813
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               589-835
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               590-834
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               592-832
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 183
               

               Conread position:
               592-835
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               44, 97
               

               Conread position:
               593-832
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               94, 41
               

               Conread position:
               611-812
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               73, 134
               

               Conread position:
               613-832
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 63
               

               Conread position:
               613-832
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               648-813
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               675-832
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               685-813
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               690-831
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               690-832
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 56
               
Show alignments to all cow chromosomes.