Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               3-406
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               10-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 55
               

               Conread position:
               23-396
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               59-401
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               26, 65
               

               Conread position:
               97-368
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               44, 56
               

               Conread position:
               113-363
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               113-364
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-366
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               113-372
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               117-374
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               132-373
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               140-372
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               86, 9
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               141-374
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               144-332
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               147-372
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               147-372
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               148-372
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               148-372
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               150-374
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               154-374
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               164-383
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               33, 77
               

               Conread position:
               166-323
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               146, 138
               

               Conread position:
               167-373
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 179
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 176
               

               Conread position:
               168-373
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               178-355
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               178-374
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               23, 168
               

               Conread position:
               190-382
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               7, 151
               

               Conread position:
               203-383
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               409-716
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               410-776
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               155, 18
               

               Conread position:
               413-832
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               152, 20
               

               Conread position:
               415-833
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 103
               

               Conread position:
               416-835
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 101
               

               Conread position:
               420-796
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               253
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               420-832
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               422-814
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               422-829
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               144, 96
               

               Conread position:
               427-832
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               208, 91
               

               Conread position:
               428-807
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               277
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               139, 94
               

               Conread position:
               439-831
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               130, 57
               

               Conread position:
               439-835
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               246, 59
               

               Conread position:
               447-822
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               97, 129
               

               Conread position:
               456-807
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               468-832
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 33
               

               Conread position:
               468-835
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               510-824
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               19, 128
               

               Conread position:
               533-831
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               535-828
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               543-831
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 38
               

               Conread position:
               560-811
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 102
               

               Conread position:
               565-831
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 34
               

               Conread position:
               582-812
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               103, 48
               

               Conread position:
               582-816
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 102
               

               Conread position:
               583-816
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               105, 42
               

               Conread position:
               591-830
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               612-816
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 29
               

               Conread position:
               631-816
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               689-832
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               690-832
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               691-835
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               723-835
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 0
               
Show alignments to all cow chromosomes.