Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-282
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 61
               

               Conread position:
               3-364
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               82, 62
               

               Conread position:
               3-370
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 63
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               5-344
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 53
               

               Conread position:
               7-387
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               51-371
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               82, 13
               

               Conread position:
               52-313
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               39, 12
               

               Conread position:
               64-383
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               66-372
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               99-374
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 68
               

               Conread position:
               113-355
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               113-356
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               113-383
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 54
               

               Conread position:
               115-387
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               139-373
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               140-367
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 8
               

               Conread position:
               148-400
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               167-373
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               31, 179
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 177
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 113
               

               Conread position:
               180-303
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               181-390
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               182-355
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 98
               

               Conread position:
               182-355
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               184-383
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               258-390
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-837
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 32
               

               Conread position:
               414-833
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               108, 86
               

               Conread position:
               415-835
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               416-831
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               298
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               417-709
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 175
               

               Conread position:
               420-832
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 15
               

               Conread position:
               421-815
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               157, 29
               

               Conread position:
               422-616
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 64
               

               Conread position:
               422-673
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               89, 112
               

               Conread position:
               424-832
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               261, 60
               

               Conread position:
               428-803
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 85
               

               Conread position:
               428-831
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               76, 54
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               430-812
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               430-832
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 68
               

               Conread position:
               439-636
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               439-832
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               442-823
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               445-835
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               6, 67
               

               Conread position:
               446-832
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               447-832
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               449-816
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 84
               

               Conread position:
               450-709
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               106, 51
               

               Conread position:
               467-842
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               467-844
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               468-832
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               490-831
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               58, 66
               

               Conread position:
               507-832
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               92, 41
               

               Conread position:
               537-827
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               109, 104
               

               Conread position:
               538-835
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               34, 97
               

               Conread position:
               560-832
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               11, 106
               

               Conread position:
               564-734
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               121, 26
               

               Conread position:
               576-832
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               111, 17
               

               Conread position:
               580-811
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               594-835
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               112, 84
               

               Conread position:
               596-832
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               91, 120
               

               Conread position:
               648-835
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               690-813
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               695-835
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               16, 0
               
Show alignments to all cow chromosomes.