Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               26, 117
               

               Conread position:
               5-388
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 60
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               13-369
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               254
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               16-395
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               75, 43
               

               Conread position:
               23-388
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               127, 35
               

               Conread position:
               91-372
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               58, 76
               

               Conread position:
               113-271
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               113-390
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               124-372
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               124-372
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               133-363
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               134-321
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               195, 7
               

               Conread position:
               144-374
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               148-372
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 17
               

               Conread position:
               148-372
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               148-374
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               158-373
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               166-373
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               167-359
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 184
               

               Conread position:
               167-367
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               34, 131
               

               Conread position:
               168-333
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               168-335
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 113
               

               Conread position:
               169-372
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 115
               

               Conread position:
               178-374
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 166
               

               Conread position:
               178-374
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               23, 167
               

               Conread position:
               181-372
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               74, 90
               

               Conread position:
               181-374
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               15, 164
               

               Conread position:
               184-383
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 98
               

               Conread position:
               186-373
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               398-741
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 193
               

               Conread position:
               413-613
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               154, 36
               

               Conread position:
               413-832
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 108
               

               Conread position:
               414-806
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 6
               

               Conread position:
               415-832
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 111
               

               Conread position:
               428-661
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 55
               

               Conread position:
               428-830
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               257, 147
               

               Conread position:
               430-811
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               273
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               81, 224
               

               Conread position:
               440-831
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 273
               

               Conread position:
               447-833
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 109
               

               Conread position:
               456-832
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 93
               

               Conread position:
               458-802
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               114, 74
               

               Conread position:
               458-835
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 131
               

               Conread position:
               459-822
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               113, 88
               

               Conread position:
               459-826
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               46, 89
               

               Conread position:
               467-832
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               100, 82
               

               Conread position:
               489-835
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               546-823
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               549-832
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               138, 37
               

               Conread position:
               558-832
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               7, 146
               

               Conread position:
               561-834
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               150, 20
               

               Conread position:
               591-835
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               123, 74
               

               Conread position:
               601-831
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               657-832
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               677-835
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               690-816
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               690-831
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               692-832
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 0
               
Show alignments to all cow chromosomes.