Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8040E16.3.5
        

               Conread position:
               1-223
               

               Cow position:
               chr11:3560783-3561005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-344
               

               Cow position:
               chr11:3562169-3562302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               124
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               329-410
               

               Cow position:
               chr11:3562769-3562850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               411-529
               

               Cow position:
               chr11:3565168-3565286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               527-611
               

               Cow position:
               chr11:3566066-3566150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               610-773
               

               Cow position:
               chr11:3574538-3574701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               773-886
               

               Cow position:
               chr11:3574793-3574906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               888-1017
               

               Cow position:
               chr11:3577851-3577979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               999-2460
               

               Cow position:
               chr11:3578284-3579717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1482
               

               Alignm identity:
               1107
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 10
               
Show alignments to all cow chromosomes.