Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8040E19.5 |
| Conread position: | 1-139 |
| Cow position: | chr2:41452425-41452283 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-139 |
| Cow position: | chr2:45597170-45597030 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-139 |
| Cow position: | chr2:46120453-46120592 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-140 |
| Cow position: | chr2:19494406-19494263 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-140 |
| Cow position: | chr2:44065756-44065621 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-141 |
| Cow position: | chr2:3773134-3773279 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-141 |
| Cow position: | chr2:13001988-13001844 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-141 |
| Cow position: | chr2:18997908-18997767 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-141 |
| Cow position: | chr2:38640510-38640371 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-141 |
| Cow position: | chr2:40257225-40257364 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-141 |
| Cow position: | chr2:42801227-42801086 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 1-141 |
| Cow position: | chr2:73981821-73981680 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-142 |
| Cow position: | chr2:11657081-11656937 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-148 |
| Cow position: | chr2:21049143-21049288 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-161 |
| Cow position: | chr2:15872121-15871963 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 141, 20 |
| Conread position: | 1-177 |
| Cow position: | chr2:4207377-4207555 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 141 |
| Conread position: | 1-179 |
| Cow position: | chr2:51099782-51099964 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 148 |
| Conread position: | 2-138 |
| Cow position: | chr2:1476599-1476458 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 2-139 |
| Cow position: | chr2:41248756-41248621 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 2-141 |
| Cow position: | chr2:19164778-19164919 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 5-139 |
| Cow position: | chr2:45542214-45542349 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 5-140 |
| Cow position: | chr2:46015786-46015922 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 8-139 |
| Cow position: | chr2:69350383-69350515 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 8-141 |
| Cow position: | chr2:35948496-35948632 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 8-141 |
| Cow position: | chr2:39334689-39334823 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 144-578 |
| Cow position: | chr2:53569393-53568968 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 571-788 |
| Cow position: | chr2:53568772-53568543 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1049-1186 |
| Cow position: | chr2:53568540-53568395 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 21 |
Show alignments to all cow chromosomes.