Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8040E19.5 |
| Conread position: | 1-136 |
| Cow position: | chr5:6245447-6245585 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-139 |
| Cow position: | chr5:22667288-22667146 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-139 |
| Cow position: | chr5:40109702-40109567 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-139 |
| Cow position: | chr5:59626754-59626896 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 106 |
| Conread position: | 1-140 |
| Cow position: | chr5:57497208-57497350 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-141 |
| Cow position: | chr5:6438807-6438949 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 1-141 |
| Cow position: | chr5:9559631-9559494 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-141 |
| Cow position: | chr5:12322593-12322734 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-141 |
| Cow position: | chr5:17105063-17104923 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 74 |
| Conread position: | 1-141 |
| Cow position: | chr5:26548925-26549067 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-141 |
| Cow position: | chr5:29599334-29599473 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-141 |
| Cow position: | chr5:46540842-46540983 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 91, 81 |
| Conread position: | 1-141 |
| Cow position: | chr5:56071076-56070932 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-141 |
| Cow position: | chr5:69383469-69383328 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-142 |
| Cow position: | chr5:64061231-64061091 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-157 |
| Cow position: | chr5:35190324-35190168 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 72, 143 |
| Conread position: | 1-158 |
| Cow position: | chr5:52849299-52849142 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 143 |
| Conread position: | 5-141 |
| Cow position: | chr5:19626790-19626651 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.