Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8040K24.3 |
| Conread position: | 5-353 |
| Cow position: | chrX:9525295-9525645 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 94, 194 |
| Conread position: | 5-353 |
| Cow position: | chrX:9553761-9554110 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 102, 194 |
| Conread position: | 5-353 |
| Cow position: | chrX:9939999-9939654 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 94, 194 |
| Conread position: | 5-376 |
| Cow position: | chrX:9869787-9870160 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 102, 134 |
| Conread position: | 5-888 |
| Cow position: | chrX:9510203-9511057 (view UCSC Genome Browser custom track) |
| Alignm length: | 891 |
| Alignm identity: | 599 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 22 |
| Conread position: | 6-353 |
| Cow position: | chrX:9942505-9942156 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 81 |
| Conread position: | 371-888 |
| Cow position: | chrX:9942110-9941600 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 371-888 |
| Cow position: | chrX:12073630-12073118 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 373-790 |
| Cow position: | chrX:9554156-9554570 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 228 |
| Conread position: | 382-704 |
| Cow position: | chrX:9525650-9525970 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 0 |
| Conread position: | 382-888 |
| Cow position: | chrX:9872370-9871867 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 0 |
| Conread position: | 383-875 |
| Cow position: | chrX:36212597-36212108 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 446, 390 |
| Conread position: | 384-884 |
| Cow position: | chrX:36128032-36127535 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 384-886 |
| Cow position: | chrX:36186945-36186446 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 220 |
| Conread position: | 395-886 |
| Cow position: | chrX:9870156-9870622 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 399-886 |
| Cow position: | chrX:9939632-9939149 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 402-726 |
| Cow position: | chrX:36137723-36137407 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 529-885 |
| Cow position: | chrX:36175472-36175119 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 534-888 |
| Cow position: | chrX:9964882-9964531 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 195 |
| Conread position: | 582-888 |
| Cow position: | chrX:9959583-9959886 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 736-886 |
| Cow position: | chrX:9525974-9526121 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.