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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8040N02.3
        

               
Conread position:
               
156-591
               

               
Cow position:
               
chr10:32503107-32503530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
153, 8
               

               
Conread position:
               
157-590
               

               
Cow position:
               
chr10:40737659-40738094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
157-592
               

               
Cow position:
               
chr10:34661666-34661222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
158-423
               

               
Cow position:
               
chr10:10573507-10573781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
80, 91
               

               
Conread position:
               
158-570
               

               
Cow position:
               
chr10:16092870-16093291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
158-570
               

               
Cow position:
               
chr10:24763129-24763564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
158-589
               

               
Cow position:
               
chr10:54948467-54948035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
158-590
               

               
Cow position:
               
chr10:14849889-14850319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
158-590
               

               
Cow position:
               
chr10:41736960-41737390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
158-590
               

               
Cow position:
               
chr10:42745555-42746016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 209
               

               
Conread position:
               
158-590
               

               
Cow position:
               
chr10:48462686-48462242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
160-578
               

               
Cow position:
               
chr10:56828662-56828227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
162-473
               

               
Cow position:
               
chr10:24971936-24971630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
162-591
               

               
Cow position:
               
chr10:54848438-54848880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
162-623
               

               
Cow position:
               
chr10:35857395-35856923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
163-590
               

               
Cow position:
               
chr10:14817499-14817063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
163-590
               

               
Cow position:
               
chr10:16598352-16598789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 8
               

               
Conread position:
               
163-590
               

               
Cow position:
               
chr10:34430551-34430124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
164-386
               

               
Cow position:
               
chr10:5264362-5264588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
164-448
               

               
Cow position:
               
chr10:51779376-51779084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 222
               

               
Conread position:
               
164-526
               

               
Cow position:
               
chr10:29816249-29816640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
164-538
               

               
Cow position:
               
chr10:29628292-29627917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
6, 48
               

               
Conread position:
               
164-538
               

               
Cow position:
               
chr10:41397129-41397521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
13, 175
               

               
Conread position:
               
164-552
               

               
Cow position:
               
chr10:54469721-54469330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
164-567
               

               
Cow position:
               
chr10:8922941-8923358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
164-569
               

               
Cow position:
               
chr10:23056438-23055997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
164-570
               

               
Cow position:
               
chr10:11221381-11221784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
164-570
               

               
Cow position:
               
chr10:39875474-39875072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
164-575
               

               
Cow position:
               
chr10:1749238-1749671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
164-578
               

               
Cow position:
               
chr10:7367137-7366695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
164-581
               

               
Cow position:
               
chr10:2613042-2613460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
164-588
               

               
Cow position:
               
chr10:21422493-21422062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
164-590
               

               
Cow position:
               
chr10:17073691-17073263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
164-590
               

               
Cow position:
               
chr10:52569256-52569693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
164-590
               

               
Cow position:
               
chr10:56732689-56733129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 171
               

               
Conread position:
               
164-591
               

               
Cow position:
               
chr10:8093656-8093216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
164-591
               

               
Cow position:
               
chr10:22390258-22390699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
164-591
               

               
Cow position:
               
chr10:24870825-24871268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
164-591
               

               
Cow position:
               
chr10:51305990-51306443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
164-593
               

               
Cow position:
               
chr10:51944024-51944466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
164-620
               

               
Cow position:
               
chr10:77052-77500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
164-671
               

               
Cow position:
               
chr10:30456189-30455642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
166-421
               

               
Cow position:
               
chr10:14639687-14639436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
166-590
               

               
Cow position:
               
chr10:13368015-13368454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
167-380
               

               
Cow position:
               
chr10:42230322-42230544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
167-449
               

               
Cow position:
               
chr10:20446765-20447050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
167-591
               

               
Cow position:
               
chr10:63627869-63628290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
167-598
               

               
Cow position:
               
chr10:24744791-24745227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
167-620
               

               
Cow position:
               
chr10:24022611-24022154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
167-671
               

               
Cow position:
               
chr10:31791591-31791076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
168-538
               

               
Cow position:
               
chr10:16740392-16740016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
168-590
               

               
Cow position:
               
chr10:33915384-33914964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 48
               

               
Conread position:
               
169-382
               

               
Cow position:
               
chr10:15112049-15111845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
170-397
               

               
Cow position:
               
chr10:32928438-32928668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
170-531
               

               
Cow position:
               
chr10:26731981-26731607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
170-570
               

               
Cow position:
               
chr10:22321195-22321604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
170-580
               

               
Cow position:
               
chr10:68829598-68829192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
170-581
               

               
Cow position:
               
chr10:1979004-1978579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
9, 201
               

               
Conread position:
               
170-590
               

               
Cow position:
               
chr10:16645526-16645088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
170-591
               

               
Cow position:
               
chr10:31401229-31400797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
170-591
               

               
Cow position:
               
chr10:39387130-39387555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
170-591
               

               
Cow position:
               
chr10:54476775-54477196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
170-591
               

               
Cow position:
               
chr10:56475137-56475570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
170-650
               

               
Cow position:
               
chr10:40551183-40551676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
170-671
               

               
Cow position:
               
chr10:50359581-50360091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
171-381
               

               
Cow position:
               
chr10:20294996-20294777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
147, 56
               

               
Conread position:
               
171-468
               

               
Cow position:
               
chr10:64878322-64878014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
171-522
               

               
Cow position:
               
chr10:22520494-22520128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
171-570
               

               
Cow position:
               
chr10:41407957-41408356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
171-574
               

               
Cow position:
               
chr10:65424241-65423819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
171-581
               

               
Cow position:
               
chr10:26577220-26577642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
171-584
               

               
Cow position:
               
chr10:19104512-19104093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
171-589
               

               
Cow position:
               
chr10:23886775-23886360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
171-590
               

               
Cow position:
               
chr10:24096709-24096271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
171-590
               

               
Cow position:
               
chr10:24756104-24756513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
217, 46
               

               
Conread position:
               
171-591
               

               
Cow position:
               
chr10:5151012-5151449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
171-591
               

               
Cow position:
               
chr10:10148300-10148751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
171-593
               

               
Cow position:
               
chr10:40106787-40107205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
171-618
               

               
Cow position:
               
chr10:37818889-37818426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
171-650
               

               
Cow position:
               
chr10:19394910-19394428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 65
               

               
Conread position:
               
171-651
               

               
Cow position:
               
chr10:20132856-20132376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
172-525
               

               
Cow position:
               
chr10:14787860-14787513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
174-501
               

               
Cow position:
               
chr10:6012360-6012027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
174-628
               

               
Cow position:
               
chr10:37529606-37529127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 316
               

               
Conread position:
               
174-645
               

               
Cow position:
               
chr10:59839618-59839128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
175-468
               

               
Cow position:
               
chr10:50200378-50200687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
175-522
               

               
Cow position:
               
chr10:69698658-69699007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
175-572
               

               
Cow position:
               
chr10:58718326-58718736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
175-577
               

               
Cow position:
               
chr10:35731855-35731439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
175-584
               

               
Cow position:
               
chr10:39939755-39939344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
175-613
               

               
Cow position:
               
chr10:35903270-35902832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
175-671
               

               
Cow position:
               
chr10:22567763-22567264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 64
               

               
Conread position:
               
176-549
               

               
Cow position:
               
chr10:24308219-24307863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
177-307
               

               
Cow position:
               
chr10:60237447-60237312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
177-309
               

               
Cow position:
               
chr10:29569059-29568930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
177-316
               

               
Cow position:
               
chr10:11059461-11059608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
177-316
               

               
Cow position:
               
chr10:51836482-51836346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
177-316
               

               
Cow position:
               
chr10:61304645-61304792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
177-336
               

               
Cow position:
               
chr10:24497225-24497070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
177-377
               

               
Cow position:
               
chr10:9526401-9526196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
128, 176
               

               
Conread position:
               
177-379
               

               
Cow position:
               
chr10:10046372-10046170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
177-391
               

               
Cow position:
               
chr10:47158782-47159001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
177-397
               

               
Cow position:
               
chr10:30746079-30746302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
177-398
               

               
Cow position:
               
chr10:7328400-7328630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
177-419
               

               
Cow position:
               
chr10:40256211-40256447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
177-419
               

               
Cow position:
               
chr10:40270290-40270527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
177-423
               

               
Cow position:
               
chr10:16985915-16986168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
177-427
               

               
Cow position:
               
chr10:56834955-56835216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
177-428
               

               
Cow position:
               
chr10:46491353-46491104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
177-434
               

               
Cow position:
               
chr10:27362173-27362430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
177-434
               

               
Cow position:
               
chr10:47976565-47976819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
177-434
               

               
Cow position:
               
chr10:57736492-57736221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
177-438
               

               
Cow position:
               
chr10:20543195-20543469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
177-452
               

               
Cow position:
               
chr10:15619143-15618851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 205
               

               
Conread position:
               
177-468
               

               
Cow position:
               
chr10:11487299-11487001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
177-474
               

               
Cow position:
               
chr10:22786577-22786879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
177-477
               

               
Cow position:
               
chr10:5113265-5113559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
177-479
               

               
Cow position:
               
chr10:52152199-52152514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
177-490
               

               
Cow position:
               
chr10:37528931-37528608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
177-492
               

               
Cow position:
               
chr10:59675948-59675607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 265
               

               
Conread position:
               
177-498
               

               
Cow position:
               
chr10:32093469-32093812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
177-505
               

               
Cow position:
               
chr10:6173013-6173371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
30, 196
               

               
Conread position:
               
177-517
               

               
Cow position:
               
chr10:8475537-8475886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
177-517
               

               
Cow position:
               
chr10:46801323-46800990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
177-531
               

               
Cow position:
               
chr10:9287745-9288089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
177-531
               

               
Cow position:
               
chr10:33891403-33891041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
177-536
               

               
Cow position:
               
chr10:27717162-27716793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
177-537
               

               
Cow position:
               
chr10:13050612-13050240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
177-538
               

               
Cow position:
               
chr10:1427714-1428089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
177-538
               

               
Cow position:
               
chr10:45337343-45337729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 43
               

               
Conread position:
               
177-540
               

               
Cow position:
               
chr10:16297638-16297299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
177-540
               

               
Cow position:
               
chr10:50110227-50109852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
177-542
               

               
Cow position:
               
chr10:15889166-15889527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 39
               

               
Conread position:
               
177-545
               

               
Cow position:
               
chr10:24547935-24548306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
177-558
               

               
Cow position:
               
chr10:21461917-21462311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
177-559
               

               
Cow position:
               
chr10:31855001-31855404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
177-561
               

               
Cow position:
               
chr10:38518955-38518555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
177-565
               

               
Cow position:
               
chr10:24785771-24786183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 380
               

               
Conread position:
               
177-570
               

               
Cow position:
               
chr10:46195473-46195864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
177-573
               

               
Cow position:
               
chr10:22528224-22527817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
177-577
               

               
Cow position:
               
chr10:41985221-41984799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr10:6851948-6852353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr10:12314836-12315236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 149
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr10:26620872-26620472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr10:35912070-35911673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr10:52046542-52046960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr10:59588492-59588092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr10:62516545-62516971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
177-579
               

               
Cow position:
               
chr10:59675576-59675162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
177-580
               

               
Cow position:
               
chr10:35796637-35796245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
177-580
               

               
Cow position:
               
chr10:65345776-65345382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
177-581
               

               
Cow position:
               
chr10:4310867-4311265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
177-581
               

               
Cow position:
               
chr10:6642541-6642982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 270
               

               
Conread position:
               
177-581
               

               
Cow position:
               
chr10:28105385-28104987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 44
               

               
Conread position:
               
177-581
               

               
Cow position:
               
chr10:65132635-65133036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
177-582
               

               
Cow position:
               
chr10:29339714-29339303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
177-582
               

               
Cow position:
               
chr10:48741483-48741066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
136, 59
               

               
Conread position:
               
177-583
               

               
Cow position:
               
chr10:32583595-32584006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
177-585
               

               
Cow position:
               
chr10:23097101-23096680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
177-585
               

               
Cow position:
               
chr10:36001882-36002294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
177-586
               

               
Cow position:
               
chr10:11967171-11966751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
177-587
               

               
Cow position:
               
chr10:28835910-28836289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
177-588
               

               
Cow position:
               
chr10:49846452-49846874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
177-589
               

               
Cow position:
               
chr10:6235747-6235348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
177-589
               

               
Cow position:
               
chr10:22616967-22616540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
177-589
               

               
Cow position:
               
chr10:35905154-35904741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr10:20095432-20095869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr10:28721470-28721876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr10:38133806-38133382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr10:38942111-38942533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr10:40147963-40147532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr10:41626285-41626694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 39
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr10:44783017-44783448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr10:61588583-61588159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:25494-25927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 229
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:2703899-2704299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:9675780-9675361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:19372651-19372234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 26
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:21082059-21082483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:29102648-29102244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 39
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:33084722-33084339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:33665518-33665944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:47773413-47773830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr10:69935098-69934678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
177-595
               

               
Cow position:
               
chr10:30441366-30440939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
177-604
               

               
Cow position:
               
chr10:6407632-6408074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
177-607
               

               
Cow position:
               
chr10:12392920-12392494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
177-609
               

               
Cow position:
               
chr10:67580973-67581404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
158, 25
               

               
Conread position:
               
177-610
               

               
Cow position:
               
chr10:11247655-11248100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
177-611
               

               
Cow position:
               
chr10:9082975-9083423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
177-611
               

               
Cow position:
               
chr10:11212773-11213234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 250
               

               
Conread position:
               
177-620
               

               
Cow position:
               
chr10:24731990-24732439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
177-620
               

               
Cow position:
               
chr10:39110319-39109882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
177-621
               

               
Cow position:
               
chr10:30360206-30360648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
222, 50
               

               
Conread position:
               
177-623
               

               
Cow position:
               
chr10:64960980-64961433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
177-624
               

               
Cow position:
               
chr10:1488523-1488967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
177-624
               

               
Cow position:
               
chr10:22480047-22479584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
177-650
               

               
Cow position:
               
chr10:668544-669021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 262
               

               
Conread position:
               
177-660
               

               
Cow position:
               
chr10:31374430-31373922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 47
               

               
Conread position:
               
177-667
               

               
Cow position:
               
chr10:22471989-22472505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
177-667
               

               
Cow position:
               
chr10:56683522-56683031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
177-671
               

               
Cow position:
               
chr10:6529878-6530380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
177-671
               

               
Cow position:
               
chr10:6719577-6720064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
177-671
               

               
Cow position:
               
chr10:11009099-11009582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
177-672
               

               
Cow position:
               
chr10:57142543-57142040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
177-691
               

               
Cow position:
               
chr10:61839277-61839792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
177-709
               

               
Cow position:
               
chr10:50016313-50015773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
177-719
               

               
Cow position:
               
chr10:17175709-17176258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
177-733
               

               
Cow position:
               
chr10:6986124-6986681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
178-473
               

               
Cow position:
               
chr10:19678545-19678854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
178-526
               

               
Cow position:
               
chr10:15294038-15294402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
178-578
               

               
Cow position:
               
chr10:23949250-23948830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
178-591
               

               
Cow position:
               
chr10:6505028-6505456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 202
               

               
Conread position:
               
178-591
               

               
Cow position:
               
chr10:10721007-10720572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
179-556
               

               
Cow position:
               
chr10:69544648-69544280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
179-578
               

               
Cow position:
               
chr10:63940455-63940867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
179-581
               

               
Cow position:
               
chr10:10043409-10043014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
179-591
               

               
Cow position:
               
chr10:59010463-59010033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 42
               

               
Conread position:
               
179-711
               

               
Cow position:
               
chr10:28671145-28670595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
180-391
               

               
Cow position:
               
chr10:56094911-56095121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
180-459
               

               
Cow position:
               
chr10:1719857-1719558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
180-578
               

               
Cow position:
               
chr10:56705909-56705497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
180-633
               

               
Cow position:
               
chr10:59164405-59163965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
181-421
               

               
Cow position:
               
chr10:25509379-25509621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
124, 46
               

               
Conread position:
               
181-586
               

               
Cow position:
               
chr10:42636911-42637330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
181-588
               

               
Cow position:
               
chr10:35862548-35862129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 44
               

               
Conread position:
               
181-591
               

               
Cow position:
               
chr10:8403882-8404316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
181-624
               

               
Cow position:
               
chr10:21448215-21447772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
182-478
               

               
Cow position:
               
chr10:58234951-58235241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
182-501
               

               
Cow position:
               
chr10:39535511-39535825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
182-538
               

               
Cow position:
               
chr10:29188679-29188306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
182-555
               

               
Cow position:
               
chr10:804875-805256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
182-581
               

               
Cow position:
               
chr10:42312586-42312996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 214
               

               
Conread position:
               
182-586
               

               
Cow position:
               
chr10:10468660-10469065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
182-588
               

               
Cow position:
               
chr10:28395603-28395202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 24
               

               
Conread position:
               
182-590
               

               
Cow position:
               
chr10:10048369-10048771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
182-590
               

               
Cow position:
               
chr10:19895081-19895494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
182-590
               

               
Cow position:
               
chr10:50534196-50533767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 344
               

               
Conread position:
               
182-590
               

               
Cow position:
               
chr10:57786018-57786440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
182-591
               

               
Cow position:
               
chr10:10134658-10135090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
182-591
               

               
Cow position:
               
chr10:18041861-18042282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
182-591
               

               
Cow position:
               
chr10:30523375-30522961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
182-591
               

               
Cow position:
               
chr10:37913495-37913085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
182-595
               

               
Cow position:
               
chr10:53674503-53674933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
182-628
               

               
Cow position:
               
chr10:55733918-55733468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
182-671
               

               
Cow position:
               
chr10:32774796-32775270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
183-477
               

               
Cow position:
               
chr10:20735389-20735687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
183-569
               

               
Cow position:
               
chr10:36896088-36896485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
183-590
               

               
Cow position:
               
chr10:37014321-37014735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
184-558
               

               
Cow position:
               
chr10:35887721-35887327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
184-578
               

               
Cow position:
               
chr10:20896984-20897377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
184-590
               

               
Cow position:
               
chr10:31527677-31528071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
185-414
               

               
Cow position:
               
chr10:6345756-6345999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
185-585
               

               
Cow position:
               
chr10:49045528-49045934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
185-589
               

               
Cow position:
               
chr10:34897682-34898069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
203, 42
               

               
Conread position:
               
186-494
               

               
Cow position:
               
chr10:60032899-60032567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
186-578
               

               
Cow position:
               
chr10:10124020-10124432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 317
               

               
Conread position:
               
186-586
               

               
Cow position:
               
chr10:43487399-43487810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
186-594
               

               
Cow position:
               
chr10:40421160-40420744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
188-536
               

               
Cow position:
               
chr10:31466431-31466794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
188-578
               

               
Cow position:
               
chr10:35753275-35752873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
188-591
               

               
Cow position:
               
chr10:5543563-5543148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
188-697
               

               
Cow position:
               
chr10:26209574-26209045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
189-581
               

               
Cow position:
               
chr10:52278409-52278817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
189-590
               

               
Cow position:
               
chr10:10752292-10751889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
189-598
               

               
Cow position:
               
chr10:15462185-15462603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
190-473
               

               
Cow position:
               
chr10:60936642-60936921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
190-617
               

               
Cow position:
               
chr10:41803206-41802765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
190-668
               

               
Cow position:
               
chr10:60960625-60961101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
192-590
               

               
Cow position:
               
chr10:64182142-64182545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
193-586
               

               
Cow position:
               
chr10:32417050-32417450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
193-590
               

               
Cow position:
               
chr10:1423524-1423936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
194-486
               

               
Cow position:
               
chr10:3985129-3985423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
194-578
               

               
Cow position:
               
chr10:29165969-29166362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
194-580
               

               
Cow position:
               
chr10:37668467-37668065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
195-589
               

               
Cow position:
               
chr10:13586400-13586803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 145
               

               
Conread position:
               
195-590
               

               
Cow position:
               
chr10:7304259-7304667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
196-498
               

               
Cow position:
               
chr10:19402625-19402946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
196-532
               

               
Cow position:
               
chr10:35767383-35767046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
196-593
               

               
Cow position:
               
chr10:5600310-5599899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 78
               

               
Conread position:
               
196-667
               

               
Cow position:
               
chr10:25699351-25699815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 126
               

               
Conread position:
               
197-493
               

               
Cow position:
               
chr10:19094344-19094648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
198-501
               

               
Cow position:
               
chr10:20398889-20399211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
200-526
               

               
Cow position:
               
chr10:14098625-14098295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
203-581
               

               
Cow position:
               
chr10:2849050-2849441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
203-606
               

               
Cow position:
               
chr10:49169365-49168918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 439
               

               
Conread position:
               
204-477
               

               
Cow position:
               
chr10:17982885-17983167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
204-668
               

               
Cow position:
               
chr10:15292966-15293447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
206-571
               

               
Cow position:
               
chr10:47788742-47789101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
209-591
               

               
Cow position:
               
chr10:23912796-23912409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 205
               

               
Conread position:
               
209-591
               

               
Cow position:
               
chr10:49146234-49146613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
210-469
               

               
Cow position:
               
chr10:65803384-65803118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
44, 230
               

               
Conread position:
               
210-569
               

               
Cow position:
               
chr10:13391351-13390967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
39, 225
               

               
Conread position:
               
210-573
               

               
Cow position:
               
chr10:23936185-23936561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 233
               

               
Conread position:
               
210-578
               

               
Cow position:
               
chr10:21424983-21424590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 164
               

               
Conread position:
               
210-591
               

               
Cow position:
               
chr10:47542798-47543178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
210-667
               

               
Cow position:
               
chr10:15318595-15319057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
210-668
               

               
Cow position:
               
chr10:15115317-15115802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 185
               

               
Conread position:
               
211-479
               

               
Cow position:
               
chr10:31266619-31266345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
211-575
               

               
Cow position:
               
chr10:43438574-43438955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
212-502
               

               
Cow position:
               
chr10:41941875-41941565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
212-589
               

               
Cow position:
               
chr10:15872157-15871772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
212-671
               

               
Cow position:
               
chr10:34175291-34174786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
214-578
               

               
Cow position:
               
chr10:17863294-17863675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
215-491
               

               
Cow position:
               
chr10:9798481-9798194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr10:24871595-24871860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
216-494
               

               
Cow position:
               
chr10:37444508-37444215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
216-590
               

               
Cow position:
               
chr10:58556905-58557274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
13, 268
               

               
Conread position:
               
216-650
               

               
Cow position:
               
chr10:56080463-56080023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
219-570
               

               
Cow position:
               
chr10:68183219-68182873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
220-395
               

               
Cow position:
               
chr10:26608176-26607985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
220-421
               

               
Cow position:
               
chr10:20811887-20812106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
220-458
               

               
Cow position:
               
chr10:888639-888890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
220-459
               

               
Cow position:
               
chr10:35026192-35026446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
220-472
               

               
Cow position:
               
chr10:20505254-20505525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
220-494
               

               
Cow position:
               
chr10:41255700-41255987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
220-540
               

               
Cow position:
               
chr10:34607270-34607613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 154
               

               
Conread position:
               
220-575
               

               
Cow position:
               
chr10:46184485-46184826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
136, 43
               

               
Conread position:
               
220-577
               

               
Cow position:
               
chr10:53357609-53357984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
220-585
               

               
Cow position:
               
chr10:60389046-60388666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 189
               

               
Conread position:
               
220-590
               

               
Cow position:
               
chr10:20372419-20372034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 305
               

               
Conread position:
               
220-590
               

               
Cow position:
               
chr10:34655399-34655007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
220-590
               

               
Cow position:
               
chr10:38943971-38944357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
32, 222
               

               
Conread position:
               
220-590
               

               
Cow position:
               
chr10:46829587-46829967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 225
               

               
Conread position:
               
220-590
               

               
Cow position:
               
chr10:55122506-55122908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
220-590
               

               
Cow position:
               
chr10:62353178-62353561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
220-591
               

               
Cow position:
               
chr10:15818084-15817692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 330
               

               
Conread position:
               
220-596
               

               
Cow position:
               
chr10:53248296-53247895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 362
               

               
Conread position:
               
220-602
               

               
Cow position:
               
chr10:6489578-6489987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
220-650
               

               
Cow position:
               
chr10:62286264-62286703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
221-398
               

               
Cow position:
               
chr10:58935476-58935289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
221-433
               

               
Cow position:
               
chr10:8923648-8923878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
221-492
               

               
Cow position:
               
chr10:57457045-57457336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
221-495
               

               
Cow position:
               
chr10:34554375-34554089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
37, 164
               

               
Conread position:
               
221-506
               

               
Cow position:
               
chr10:61304995-61305279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 193
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr10:48259517-48259193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
221-559
               

               
Cow position:
               
chr10:38725373-38725725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
221-566
               

               
Cow position:
               
chr10:38014086-38014443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 203
               

               
Conread position:
               
221-569
               

               
Cow position:
               
chr10:57461079-57461437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
221-576
               

               
Cow position:
               
chr10:67627272-67626908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
221-581
               

               
Cow position:
               
chr10:1976607-1976225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 300
               

               
Conread position:
               
221-581
               

               
Cow position:
               
chr10:13765450-13765071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 215
               

               
Conread position:
               
221-581
               

               
Cow position:
               
chr10:45370772-45371148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
221-590
               

               
Cow position:
               
chr10:17844482-17844868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
221-590
               

               
Cow position:
               
chr10:31027928-31027539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
14, 18
               

               
Conread position:
               
221-591
               

               
Cow position:
               
chr10:37235838-37235442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
33, 215
               

               
Conread position:
               
221-591
               

               
Cow position:
               
chr10:52296211-52296597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 189
               

               
Conread position:
               
221-649
               

               
Cow position:
               
chr10:39227870-39228300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
221-671
               

               
Cow position:
               
chr10:51696466-51696935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
221-731
               

               
Cow position:
               
chr10:58259802-58259278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 220
               

               
Conread position:
               
222-581
               

               
Cow position:
               
chr10:2449068-2449438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 174
               

               
Conread position:
               
223-581
               

               
Cow position:
               
chr10:8934202-8934563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
224-438
               

               
Cow position:
               
chr10:54936396-54936166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 222
               

               
Conread position:
               
224-472
               

               
Cow position:
               
chr10:39139924-39140162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
224-507
               

               
Cow position:
               
chr10:33867660-33867383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
224-570
               

               
Cow position:
               
chr10:45769757-45770125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 198
               

               
Conread position:
               
224-579
               

               
Cow position:
               
chr10:5890054-5889672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
225-472
               

               
Cow position:
               
chr10:54799335-54799596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
225-545
               

               
Cow position:
               
chr10:64876234-64876576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
225-573
               

               
Cow position:
               
chr10:53973566-53973926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
225-581
               

               
Cow position:
               
chr10:34660498-34660150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 104
               

               
Conread position:
               
225-581
               

               
Cow position:
               
chr10:50332310-50332685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 357
               

               
Conread position:
               
225-590
               

               
Cow position:
               
chr10:30352561-30352954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
225-591
               

               
Cow position:
               
chr10:31362492-31362110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
225-591
               

               
Cow position:
               
chr10:67443388-67443018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
37, 258
               

               
Conread position:
               
225-595
               

               
Cow position:
               
chr10:37512528-37512132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 383
               

               
Conread position:
               
225-650
               

               
Cow position:
               
chr10:27749392-27749827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 210
               

               
Conread position:
               
225-720
               

               
Cow position:
               
chr10:28776090-28776580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
165, 80
               

               
Conread position:
               
226-460
               

               
Cow position:
               
chr10:49568922-49569172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 198
               

               
Conread position:
               
226-556
               

               
Cow position:
               
chr10:65748676-65749019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
226-568
               

               
Cow position:
               
chr10:53935022-53934673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
226-578
               

               
Cow position:
               
chr10:3998627-3998999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
226-592
               

               
Cow position:
               
chr10:51288973-51289352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 174
               

               
Conread position:
               
226-617
               

               
Cow position:
               
chr10:13311450-13311858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
228-578
               

               
Cow position:
               
chr10:721019-721390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 170
               

               
Conread position:
               
229-540
               

               
Cow position:
               
chr10:39398797-39398463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
231-494
               

               
Cow position:
               
chr10:21037033-21037311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 181
               

               
Conread position:
               
231-525
               

               
Cow position:
               
chr10:39268319-39268631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
231-578
               

               
Cow position:
               
chr10:21657144-21657509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 189
               

               
Conread position:
               
231-578
               

               
Cow position:
               
chr10:28039208-28038844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
231-578
               

               
Cow position:
               
chr10:29279168-29279535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
231-578
               

               
Cow position:
               
chr10:59571624-59571991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 201
               

               
Conread position:
               
231-590
               

               
Cow position:
               
chr10:15867959-15868353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
231-590
               

               
Cow position:
               
chr10:24752881-24753244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
231-591
               

               
Cow position:
               
chr10:20552910-20553287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
231-711
               

               
Cow position:
               
chr10:2462753-2462275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
232-398
               

               
Cow position:
               
chr10:35715982-35715806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
232-578
               

               
Cow position:
               
chr10:31779536-31779179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr10:38512903-38513261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 312
               

               
Conread position:
               
235-650
               

               
Cow position:
               
chr10:2304649-2304224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
236-591
               

               
Cow position:
               
chr10:35802637-35802258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 211
               

               
Conread position:
               
242-572
               

               
Cow position:
               
chr10:20997542-20997204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
246-451
               

               
Cow position:
               
chr10:34300248-34300461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 147
               

               
Conread position:
               
246-580
               

               
Cow position:
               
chr10:59844182-59843817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
246-581
               

               
Cow position:
               
chr10:14947008-14947346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
6, 42
               

               
Conread position:
               
246-589
               

               
Cow position:
               
chr10:36489760-36490120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 87
               

               
Conread position:
               
246-590
               

               
Cow position:
               
chr10:62114440-62114790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
246-591
               

               
Cow position:
               
chr10:11080699-11081067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
246-591
               

               
Cow position:
               
chr10:54504344-54504704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
59, 225
               

               
Conread position:
               
246-671
               

               
Cow position:
               
chr10:43508737-43509182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
246-691
               

               
Cow position:
               
chr10:50609280-50609752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 368
               

               
Conread position:
               
248-393
               

               
Cow position:
               
chr10:2856834-2856977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 69
               

               
Conread position:
               
248-441
               

               
Cow position:
               
chr10:48377901-48377693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
248-468
               

               
Cow position:
               
chr10:17584285-17584061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
248-470
               

               
Cow position:
               
chr10:37822983-37822752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
56, 149
               

               
Conread position:
               
248-472
               

               
Cow position:
               
chr10:9445269-9445039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 198
               

               
Conread position:
               
248-472
               

               
Cow position:
               
chr10:25045938-25045709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
248-472
               

               
Cow position:
               
chr10:50039158-50039376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
248-472
               

               
Cow position:
               
chr10:59141172-59141415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
248-473
               

               
Cow position:
               
chr10:31812673-31812453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 63
               

               
Conread position:
               
248-494
               

               
Cow position:
               
chr10:52029366-52029628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
248-503
               

               
Cow position:
               
chr10:5607388-5607656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
248-531
               

               
Cow position:
               
chr10:43288125-43287830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
70, 275
               

               
Conread position:
               
248-538
               

               
Cow position:
               
chr10:5502768-5503069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 155
               

               
Conread position:
               
248-538
               

               
Cow position:
               
chr10:44817527-44817823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 194
               

               
Conread position:
               
248-540
               

               
Cow position:
               
chr10:29069900-29070209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
31, 198
               

               
Conread position:
               
248-559
               

               
Cow position:
               
chr10:8413306-8412982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
248-566
               

               
Cow position:
               
chr10:28176649-28176310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
248-575
               

               
Cow position:
               
chr10:53179047-53179365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
248-577
               

               
Cow position:
               
chr10:24561243-24560904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
248-578
               

               
Cow position:
               
chr10:27828083-27828410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
227, 61
               

               
Conread position:
               
248-578
               

               
Cow position:
               
chr10:35901081-35901402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
248-578
               

               
Cow position:
               
chr10:48255479-48255135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
65, 119
               

               
Conread position:
               
248-578
               

               
Cow position:
               
chr10:59152119-59151775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 194
               

               
Conread position:
               
248-579
               

               
Cow position:
               
chr10:2185076-2185437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 311
               

               
Conread position:
               
248-586
               

               
Cow position:
               
chr10:48257535-48257180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
248-586
               

               
Cow position:
               
chr10:58690648-58691004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
248-588
               

               
Cow position:
               
chr10:23576287-23576645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 299
               

               
Conread position:
               
248-589
               

               
Cow position:
               
chr10:24133076-24132723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr10:22341309-22341678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 124
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr10:25935988-25936333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
102, 70
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr10:38370718-38370354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 334
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr10:46150629-46150972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr10:50183303-50182950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 269
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr10:63883717-63884039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
248-591
               

               
Cow position:
               
chr10:9576295-9575946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 191
               

               
Conread position:
               
248-591
               

               
Cow position:
               
chr10:23506741-23506389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
248-591
               

               
Cow position:
               
chr10:35791677-35792028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 234
               

               
Conread position:
               
248-592
               

               
Cow position:
               
chr10:64286052-64285690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
47, 146
               

               
Conread position:
               
248-601
               

               
Cow position:
               
chr10:54962975-54962603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
248-649
               

               
Cow position:
               
chr10:52113921-52113507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
248-649
               

               
Cow position:
               
chr10:54730755-54731161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 151
               

               
Conread position:
               
248-650
               

               
Cow position:
               
chr10:65071055-65071460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
57, 238
               

               
Conread position:
               
248-652
               

               
Cow position:
               
chr10:49456332-49455931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
248-679
               

               
Cow position:
               
chr10:2974344-2973914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
250-553
               

               
Cow position:
               
chr10:29589095-29588775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 164
               

               
Conread position:
               
251-545
               

               
Cow position:
               
chr10:51313737-51314063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 189
               

               
Conread position:
               
251-577
               

               
Cow position:
               
chr10:26631183-26631495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
251-581
               

               
Cow position:
               
chr10:33194768-33195134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
251-586
               

               
Cow position:
               
chr10:57059534-57059184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
251-590
               

               
Cow position:
               
chr10:24313142-24312788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
54, 299
               

               
Conread position:
               
251-672
               

               
Cow position:
               
chr10:29251909-29252352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 283
               

               
Conread position:
               
252-484
               

               
Cow position:
               
chr10:8170006-8170242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
136, 152
               

               
Conread position:
               
252-591
               

               
Cow position:
               
chr10:50559179-50558822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 226
               

               
Conread position:
               
254-671
               

               
Cow position:
               
chr10:22396005-22396435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 351
               

               
Conread position:
               
255-590
               

               
Cow position:
               
chr10:44771407-44771751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
63, 153
               

               
Conread position:
               
255-590
               

               
Cow position:
               
chr10:48317204-48316846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
255-591
               

               
Cow position:
               
chr10:63276142-63276492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 308
               

               
Conread position:
               
258-525
               

               
Cow position:
               
chr10:32030070-32029796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
259-591
               

               
Cow position:
               
chr10:64041838-64042185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 6
               

               
Conread position:
               
261-477
               

               
Cow position:
               
chr10:48388510-48388285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
264-590
               

               
Cow position:
               
chr10:37989069-37989391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
265-564
               

               
Cow position:
               
chr10:60722383-60722085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
265-581
               

               
Cow position:
               
chr10:37415546-37415882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
266-590
               

               
Cow position:
               
chr10:62219586-62219935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
267-508
               

               
Cow position:
               
chr10:25882189-25882431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
270-566
               

               
Cow position:
               
chr10:28152617-28152302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
270-590
               

               
Cow position:
               
chr10:45379242-45378903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 292
               

               
Conread position:
               
270-612
               

               
Cow position:
               
chr10:28840719-28841080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
272-552
               

               
Cow position:
               
chr10:24744316-24744609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
272-578
               

               
Cow position:
               
chr10:51862300-51861989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
272-591
               

               
Cow position:
               
chr10:6435827-6436162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
273-566
               

               
Cow position:
               
chr10:47412339-47412029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
276-590
               

               
Cow position:
               
chr10:48513301-48512980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
277-590
               

               
Cow position:
               
chr10:63031654-63031982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 130
               

               
Conread position:
               
278-614
               

               
Cow position:
               
chr10:46493229-46492873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 314
               

               
Conread position:
               
280-588
               

               
Cow position:
               
chr10:66194528-66194205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
281-664
               

               
Cow position:
               
chr10:7816885-7817276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
284-542
               

               
Cow position:
               
chr10:41254782-41254520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
293-560
               

               
Cow position:
               
chr10:13617851-13617582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
298-590
               

               
Cow position:
               
chr10:1996862-1996570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 144
               

               
Conread position:
               
301-566
               

               
Cow position:
               
chr10:32834624-32834898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
301-609
               

               
Cow position:
               
chr10:28429690-28429383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
174, 134
               

               
Conread position:
               
303-558
               

               
Cow position:
               
chr10:24780992-24781258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
303-573
               

               
Cow position:
               
chr10:33733061-33732788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 208
               

               
Conread position:
               
303-578
               

               
Cow position:
               
chr10:17836757-17837041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
303-581
               

               
Cow position:
               
chr10:24276928-24276633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
303-590
               

               
Cow position:
               
chr10:10120003-10120295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
303-590
               

               
Cow position:
               
chr10:45476410-45476121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 133
               

               
Conread position:
               
303-590
               

               
Cow position:
               
chr10:45871321-45871616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
303-606
               

               
Cow position:
               
chr10:51942595-51942905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
303-620
               

               
Cow position:
               
chr10:35779097-35778767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 251
               

               
Conread position:
               
303-633
               

               
Cow position:
               
chr10:6665738-6665414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
303-721
               

               
Cow position:
               
chr10:55930003-55930431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
304-581
               

               
Cow position:
               
chr10:58612808-58612548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
197, 22
               

               
Conread position:
               
304-590
               

               
Cow position:
               
chr10:4184001-4184297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
304-590
               

               
Cow position:
               
chr10:7291987-7291709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
304-591
               

               
Cow position:
               
chr10:68926963-68927250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
304-604
               

               
Cow position:
               
chr10:50134997-50134688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
305-533
               

               
Cow position:
               
chr10:39304043-39303802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
306-589
               

               
Cow position:
               
chr10:69587871-69587578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
308-589
               

               
Cow position:
               
chr10:5020551-5020282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
310-590
               

               
Cow position:
               
chr10:11463854-11463562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
11, 172
               

               
Conread position:
               
312-504
               

               
Cow position:
               
chr10:24422349-24422143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
320-472
               

               
Cow position:
               
chr10:48499926-48500076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
320-559
               

               
Cow position:
               
chr10:5264644-5264881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
320-591
               

               
Cow position:
               
chr10:19549665-19549386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 261
               

               
Conread position:
               
320-591
               

               
Cow position:
               
chr10:45657968-45658247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
320-591
               

               
Cow position:
               
chr10:52695905-52695624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
320-772
               

               
Cow position:
               
chr10:37295839-37295370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
321-556
               

               
Cow position:
               
chr10:42893140-42892903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
321-590
               

               
Cow position:
               
chr10:16986154-16986433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
321-590
               

               
Cow position:
               
chr10:33067740-33067475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 105
               

               
Conread position:
               
321-591
               

               
Cow position:
               
chr10:24375377-24375646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
322-595
               

               
Cow position:
               
chr10:4164093-4164377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
323-505
               

               
Cow position:
               
chr10:35856523-35856343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
323-529
               

               
Cow position:
               
chr10:48408565-48408355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 192
               

               
Conread position:
               
323-581
               

               
Cow position:
               
chr10:55622019-55621762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
324-567
               

               
Cow position:
               
chr10:533359-533610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
328-573
               

               
Cow position:
               
chr10:12486095-12486347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
328-589
               

               
Cow position:
               
chr10:67288127-67288391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
329-578
               

               
Cow position:
               
chr10:33240845-33240593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr10:47724780-47725110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
330-581
               

               
Cow position:
               
chr10:38376818-38376567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
330-589
               

               
Cow position:
               
chr10:4109423-4109687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
330-590
               

               
Cow position:
               
chr10:38240917-38241180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
27, 178
               

               
Conread position:
               
334-562
               

               
Cow position:
               
chr10:39587022-39586784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
334-592
               

               
Cow position:
               
chr10:44422064-44421802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
338-577
               

               
Cow position:
               
chr10:16683972-16683718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
338-590
               

               
Cow position:
               
chr10:17022722-17022464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
338-591
               

               
Cow position:
               
chr10:6543564-6543827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 248
               

               
Conread position:
               
339-581
               

               
Cow position:
               
chr10:6663871-6664126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
340-590
               

               
Cow position:
               
chr10:6384379-6384629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
341-590
               

               
Cow position:
               
chr10:2202282-2202028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 176
               

               
Conread position:
               
343-671
               

               
Cow position:
               
chr10:47690236-47690560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
345-591
               

               
Cow position:
               
chr10:46262040-46262283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
346-601
               

               
Cow position:
               
chr10:38430715-38430452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
346-672
               

               
Cow position:
               
chr10:30460514-30460832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
347-500
               

               
Cow position:
               
chr10:46718896-46718740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
347-633
               

               
Cow position:
               
chr10:22633774-22633479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
347-640
               

               
Cow position:
               
chr10:47651159-47651445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
349-591
               

               
Cow position:
               
chr10:33117098-33116849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
350-537
               

               
Cow position:
               
chr10:2899535-2899722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
353-494
               

               
Cow position:
               
chr10:37442161-37442310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
355-578
               

               
Cow position:
               
chr10:58451513-58451285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
355-584
               

               
Cow position:
               
chr10:52120598-52120832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
355-590
               

               
Cow position:
               
chr10:9656678-9656421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
355-591
               

               
Cow position:
               
chr10:41132131-41132365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
355-610
               

               
Cow position:
               
chr10:20391575-20391325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
355-614
               

               
Cow position:
               
chr10:53075980-53076238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
356-633
               

               
Cow position:
               
chr10:69216236-69216505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
357-590
               

               
Cow position:
               
chr10:7383750-7383513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
360-671
               

               
Cow position:
               
chr10:4151410-4151717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
361-570
               

               
Cow position:
               
chr10:45624285-45624075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
362-577
               

               
Cow position:
               
chr10:3364311-3364093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
362-579
               

               
Cow position:
               
chr10:6768843-6768633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 172
               

               
Conread position:
               
362-591
               

               
Cow position:
               
chr10:15309531-15309300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
362-667
               

               
Cow position:
               
chr10:52069618-52069303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
362-676
               

               
Cow position:
               
chr10:13315807-13316127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
363-558
               

               
Cow position:
               
chr10:49038446-49038655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
363-634
               

               
Cow position:
               
chr10:9579099-9578814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 249
               

               
Conread position:
               
364-580
               

               
Cow position:
               
chr10:45295272-45295051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
364-613
               

               
Cow position:
               
chr10:8449366-8449628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 248
               

               
Conread position:
               
366-590
               

               
Cow position:
               
chr10:52881750-52881517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr10:31005148-31004931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
367-581
               

               
Cow position:
               
chr10:15427196-15426989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
370-668
               

               
Cow position:
               
chr10:49948005-49947696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
371-582
               

               
Cow position:
               
chr10:12100674-12100450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
372-581
               

               
Cow position:
               
chr10:36107542-36107323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
375-586
               

               
Cow position:
               
chr10:58935290-58935072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
378-570
               

               
Cow position:
               
chr10:10026239-10026431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
384-587
               

               
Cow position:
               
chr10:19539931-19539724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
386-668
               

               
Cow position:
               
chr10:56180459-56180744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
387-575
               

               
Cow position:
               
chr10:48178245-48178433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 133
               

               
Conread position:
               
387-590
               

               
Cow position:
               
chr10:22888924-22888713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
14, 150
               

               
Conread position:
               
387-590
               

               
Cow position:
               
chr10:46934893-46934680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 180
               

               
Conread position:
               
389-591
               

               
Cow position:
               
chr10:55396084-55395874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
400-570
               

               
Cow position:
               
chr10:46575414-46575592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
400-571
               

               
Cow position:
               
chr10:517197-517365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
400-581
               

               
Cow position:
               
chr10:54819172-54819358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
400-592
               

               
Cow position:
               
chr10:10137774-10137968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
400-646
               

               
Cow position:
               
chr10:29526986-29526741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
400-671
               

               
Cow position:
               
chr10:42230696-42230968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 182
               

               
Conread position:
               
401-563
               

               
Cow position:
               
chr10:48282646-48282477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
401-581
               

               
Cow position:
               
chr10:15424961-15425142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
404-590
               

               
Cow position:
               
chr10:55382224-55382416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
407-577
               

               
Cow position:
               
chr10:17553096-17553266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
407-581
               

               
Cow position:
               
chr10:13918339-13918167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
407-588
               

               
Cow position:
               
chr10:35715688-35715489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
407-590
               

               
Cow position:
               
chr10:47182652-47182468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
407-590
               

               
Cow position:
               
chr10:63484555-63484741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
407-592
               

               
Cow position:
               
chr10:19098751-19098939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 155
               

               
Conread position:
               
407-642
               

               
Cow position:
               
chr10:24903072-24902831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
409-581
               

               
Cow position:
               
chr10:13197919-13197739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
409-620
               

               
Cow position:
               
chr10:35893994-35893774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
409-671
               

               
Cow position:
               
chr10:60491343-60491100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
410-590
               

               
Cow position:
               
chr10:25465980-25466168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
410-608
               

               
Cow position:
               
chr10:33311558-33311368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
411-590
               

               
Cow position:
               
chr10:54776464-54776647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
412-585
               

               
Cow position:
               
chr10:51727499-51727327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
412-590
               

               
Cow position:
               
chr10:17568183-17568000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
413-590
               

               
Cow position:
               
chr10:55319409-55319597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
430-591
               

               
Cow position:
               
chr10:23379070-23379236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
430-591
               

               
Cow position:
               
chr10:40744053-40744215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
430-672
               

               
Cow position:
               
chr10:60962356-60962598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
431-591
               

               
Cow position:
               
chr10:32080213-32080374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
434-588
               

               
Cow position:
               
chr10:17691289-17691142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
434-608
               

               
Cow position:
               
chr10:24831142-24830961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
434-629
               

               
Cow position:
               
chr10:51223190-51222989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 197
               

               
Conread position:
               
436-590
               

               
Cow position:
               
chr10:58737013-58736864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
436-616
               

               
Cow position:
               
chr10:17766029-17765843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
436-619
               

               
Cow position:
               
chr10:33371327-33371516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 170
               

               
Conread position:
               
436-620
               

               
Cow position:
               
chr10:15224908-15225096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
436-650
               

               
Cow position:
               
chr10:50042551-50042756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
437-620
               

               
Cow position:
               
chr10:24151942-24151756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
437-643
               

               
Cow position:
               
chr10:31798455-31798250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
438-592
               

               
Cow position:
               
chr10:14093297-14093144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
438-620
               

               
Cow position:
               
chr10:67260581-67260397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
438-671
               

               
Cow position:
               
chr10:25529248-25529006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 208
               

               
Conread position:
               
439-572
               

               
Cow position:
               
chr10:705049-704912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
439-589
               

               
Cow position:
               
chr10:43273098-43272944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
439-620
               

               
Cow position:
               
chr10:23922954-23923139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
439-649
               

               
Cow position:
               
chr10:49253313-49253523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
439-671
               

               
Cow position:
               
chr10:32573674-32573916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 142
               

               
Conread position:
               
440-590
               

               
Cow position:
               
chr10:41115852-41116006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
441-580
               

               
Cow position:
               
chr10:22480235-22480377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
442-570
               

               
Cow position:
               
chr10:34700580-34700712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
442-590
               

               
Cow position:
               
chr10:35604999-35605151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
442-591
               

               
Cow position:
               
chr10:13927684-13927836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
442-601
               

               
Cow position:
               
chr10:29349561-29349726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
443-580
               

               
Cow position:
               
chr10:1108513-1108371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
445-581
               

               
Cow position:
               
chr10:50498570-50498432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
445-590
               

               
Cow position:
               
chr10:22981026-22980876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
445-590
               

               
Cow position:
               
chr10:47159167-47159316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
445-606
               

               
Cow position:
               
chr10:23128034-23127871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
446-583
               

               
Cow position:
               
chr10:48898619-48898760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
446-595
               

               
Cow position:
               
chr10:48377444-48377292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
447-578
               

               
Cow position:
               
chr10:30261648-30261517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
448-590
               

               
Cow position:
               
chr10:39258539-39258393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
450-590
               

               
Cow position:
               
chr10:16830429-16830286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 128
               

               
Conread position:
               
451-671
               

               
Cow position:
               
chr10:17388799-17389018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
453-606
               

               
Cow position:
               
chr10:6516658-6516812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
461-650
               

               
Cow position:
               
chr10:48742561-48742371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
467-622
               

               
Cow position:
               
chr10:32986193-32986039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
472-590
               

               
Cow position:
               
chr10:17448218-17448096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
474-589
               

               
Cow position:
               
chr10:31266064-31265954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
474-591
               

               
Cow position:
               
chr10:13158095-13158216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
474-647
               

               
Cow position:
               
chr10:35795324-35795485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
481-591
               

               
Cow position:
               
chr10:3985879-3985991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
482-588
               

               
Cow position:
               
chr10:53972114-53972009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
482-620
               

               
Cow position:
               
chr10:22120132-22119990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
482-651
               

               
Cow position:
               
chr10:22139788-22139613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
482-661
               

               
Cow position:
               
chr10:57457620-57457800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
483-600
               

               
Cow position:
               
chr10:65359695-65359816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
483-623
               

               
Cow position:
               
chr10:889954-890096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
485-671
               

               
Cow position:
               
chr10:37442536-37442726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
485-691
               

               
Cow position:
               
chr10:37785372-37785173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
486-650
               

               
Cow position:
               
chr10:22811063-22810898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
501-667
               

               
Cow position:
               
chr10:46941466-46941296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
501-672
               

               
Cow position:
               
chr10:19071869-19072044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
528-668
               

               
Cow position:
               
chr10:52483468-52483325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 132
               
Show alignments to all cow chromosomes.