• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8040N02.3
        

               
Conread position:
               
157-580
               

               
Cow position:
               
chr20:1140060-1139610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 387
               

               
Conread position:
               
157-671
               

               
Cow position:
               
chr20:581208-580667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 220
               

               
Conread position:
               
158-391
               

               
Cow position:
               
chr20:35970665-35970907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
158-439
               

               
Cow position:
               
chr20:23679426-23679135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
158-442
               

               
Cow position:
               
chr20:12334104-12334391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
158-493
               

               
Cow position:
               
chr20:31261454-31261794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
158-540
               

               
Cow position:
               
chr20:22313439-22313042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
158-545
               

               
Cow position:
               
chr20:16715125-16715515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
158-579
               

               
Cow position:
               
chr20:19459921-19459508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
158-591
               

               
Cow position:
               
chr20:7426468-7426028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
158-593
               

               
Cow position:
               
chr20:19236812-19237246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
159-588
               

               
Cow position:
               
chr20:8703184-8702757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
161-590
               

               
Cow position:
               
chr20:5950902-5950475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 41
               

               
Conread position:
               
164-425
               

               
Cow position:
               
chr20:12048136-12048392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 47
               

               
Conread position:
               
164-471
               

               
Cow position:
               
chr20:14756339-14756022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
164-569
               

               
Cow position:
               
chr20:25162382-25161978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
164-578
               

               
Cow position:
               
chr20:13269353-13269772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
164-578
               

               
Cow position:
               
chr20:13465228-13465662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 330
               

               
Conread position:
               
164-578
               

               
Cow position:
               
chr20:13751974-13752381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
164-578
               

               
Cow position:
               
chr20:14806613-14807043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
164-581
               

               
Cow position:
               
chr20:9412224-9412647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
164-584
               

               
Cow position:
               
chr20:18321066-18320631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
164-591
               

               
Cow position:
               
chr20:12582219-12581786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
164-591
               

               
Cow position:
               
chr20:19751040-19751476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
164-591
               

               
Cow position:
               
chr20:25009912-25009463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
166-590
               

               
Cow position:
               
chr20:22959613-22959180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
166-591
               

               
Cow position:
               
chr20:21019295-21019729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
167-590
               

               
Cow position:
               
chr20:10818495-10818073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
168-662
               

               
Cow position:
               
chr20:5998935-5998441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 54
               

               
Conread position:
               
169-589
               

               
Cow position:
               
chr20:21372035-21372475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 169
               

               
Conread position:
               
170-446
               

               
Cow position:
               
chr20:18413593-18413874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
170-505
               

               
Cow position:
               
chr20:20201728-20202072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
170-588
               

               
Cow position:
               
chr20:40423355-40422936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
171-373
               

               
Cow position:
               
chr20:32548705-32548905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
171-494
               

               
Cow position:
               
chr20:17903896-17904228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 40
               

               
Conread position:
               
171-565
               

               
Cow position:
               
chr20:33363253-33363661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
171-570
               

               
Cow position:
               
chr20:23792341-23792752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
171-593
               

               
Cow position:
               
chr20:17251448-17251888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
175-392
               

               
Cow position:
               
chr20:3502035-3502259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
175-461
               

               
Cow position:
               
chr20:8910646-8910955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
36, 230
               

               
Conread position:
               
175-466
               

               
Cow position:
               
chr20:31077277-31077593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
175-531
               

               
Cow position:
               
chr20:7659468-7659104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
175-588
               

               
Cow position:
               
chr20:33532051-33532469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
175-590
               

               
Cow position:
               
chr20:39415494-39415918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
175-591
               

               
Cow position:
               
chr20:34202388-34202804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
175-613
               

               
Cow position:
               
chr20:17845691-17846151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
176-472
               

               
Cow position:
               
chr20:32636823-32636526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
176-588
               

               
Cow position:
               
chr20:398551-398141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
177-370
               

               
Cow position:
               
chr20:4893170-4892961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
177-380
               

               
Cow position:
               
chr20:23850030-23850234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
177-381
               

               
Cow position:
               
chr20:39375931-39376126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
176, 39
               

               
Conread position:
               
177-414
               

               
Cow position:
               
chr20:41977165-41977404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
177-423
               

               
Cow position:
               
chr20:11614300-11614046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
177-423
               

               
Cow position:
               
chr20:16291222-16291468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
177-451
               

               
Cow position:
               
chr20:21324857-21325141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
177-457
               

               
Cow position:
               
chr20:19410622-19410330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
177-458
               

               
Cow position:
               
chr20:18399504-18399798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
177-466
               

               
Cow position:
               
chr20:10539064-10539360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
177-468
               

               
Cow position:
               
chr20:24002072-24002358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
179, 27
               

               
Conread position:
               
177-473
               

               
Cow position:
               
chr20:3781688-3781376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
177-473
               

               
Cow position:
               
chr20:27339806-27340110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
177-479
               

               
Cow position:
               
chr20:15068891-15069192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
177-493
               

               
Cow position:
               
chr20:15761204-15760881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
177-493
               

               
Cow position:
               
chr20:18185322-18185635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
177-494
               

               
Cow position:
               
chr20:7132091-7132419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
177-494
               

               
Cow position:
               
chr20:10034187-10033850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 71
               

               
Conread position:
               
177-494
               

               
Cow position:
               
chr20:18100162-18100477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
177-505
               

               
Cow position:
               
chr20:13967516-13967176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
177-505
               

               
Cow position:
               
chr20:39377397-39377086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
176, 39
               

               
Conread position:
               
177-525
               

               
Cow position:
               
chr20:35958392-35958753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
177-535
               

               
Cow position:
               
chr20:20353171-20352799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
177-538
               

               
Cow position:
               
chr20:12441948-12441581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
177-552
               

               
Cow position:
               
chr20:7110375-7109992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
177-566
               

               
Cow position:
               
chr20:35797349-35797753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
177-576
               

               
Cow position:
               
chr20:4621597-4621200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
177-580
               

               
Cow position:
               
chr20:11550109-11550526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
177-581
               

               
Cow position:
               
chr20:33144810-33144394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
177-585
               

               
Cow position:
               
chr20:4945502-4945091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
177-585
               

               
Cow position:
               
chr20:9473870-9473468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 6
               

               
Conread position:
               
177-588
               

               
Cow position:
               
chr20:39398223-39398647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
177-589
               

               
Cow position:
               
chr20:3599649-3599231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 57
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr20:7806819-7806401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr20:13876965-13876543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr20:32847095-32847513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr20:35364777-35365210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 167
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr20:40304105-40303719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr20:5702491-5702893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr20:6240786-6240352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr20:20202959-20203388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr20:24069558-24069975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr20:35145750-35146190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
177-608
               

               
Cow position:
               
chr20:36779987-36779543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
177-614
               

               
Cow position:
               
chr20:18392496-18392080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 15
               

               
Conread position:
               
177-616
               

               
Cow position:
               
chr20:7756884-7756432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
177-621
               

               
Cow position:
               
chr20:39728194-39728648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
177-650
               

               
Cow position:
               
chr20:23065094-23064609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
177-650
               

               
Cow position:
               
chr20:23871072-23870591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
177-667
               

               
Cow position:
               
chr20:10178367-10177849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
177-668
               

               
Cow position:
               
chr20:9536880-9537395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
178-357
               

               
Cow position:
               
chr20:31147840-31148014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 31
               

               
Conread position:
               
178-438
               

               
Cow position:
               
chr20:15582291-15582027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
178-492
               

               
Cow position:
               
chr20:19313321-19312998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
178-589
               

               
Cow position:
               
chr20:33435418-33434993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
178-591
               

               
Cow position:
               
chr20:22064817-22065235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
179-397
               

               
Cow position:
               
chr20:23164127-23163907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
179-497
               

               
Cow position:
               
chr20:27298997-27298667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
179-579
               

               
Cow position:
               
chr20:40176997-40177402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
179-591
               

               
Cow position:
               
chr20:9014603-9014178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
181-427
               

               
Cow position:
               
chr20:14740351-14740097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
181-468
               

               
Cow position:
               
chr20:14831874-14831570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 192
               

               
Conread position:
               
181-472
               

               
Cow position:
               
chr20:3034844-3035152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
181-591
               

               
Cow position:
               
chr20:13652617-13652198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
182-472
               

               
Cow position:
               
chr20:27314430-27314716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
182-494
               

               
Cow position:
               
chr20:5104686-5104381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
182-508
               

               
Cow position:
               
chr20:12155352-12155040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
182-538
               

               
Cow position:
               
chr20:24398884-24398530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
182-566
               

               
Cow position:
               
chr20:6423713-6424112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
182-570
               

               
Cow position:
               
chr20:8577994-8578397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
182-570
               

               
Cow position:
               
chr20:19363614-19363215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
182-577
               

               
Cow position:
               
chr20:9433350-9433742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 28
               

               
Conread position:
               
182-591
               

               
Cow position:
               
chr20:39418144-39417734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
182-650
               

               
Cow position:
               
chr20:12996261-12995788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
183-439
               

               
Cow position:
               
chr20:22445887-22445625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
183-543
               

               
Cow position:
               
chr20:3607202-3606840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
183-591
               

               
Cow position:
               
chr20:25658040-25657670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
205, 38
               

               
Conread position:
               
184-570
               

               
Cow position:
               
chr20:22235062-22235460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
185-555
               

               
Cow position:
               
chr20:34001645-34001257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
185-589
               

               
Cow position:
               
chr20:31746872-31746468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
185-591
               

               
Cow position:
               
chr20:29844796-29845219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 392
               

               
Conread position:
               
187-585
               

               
Cow position:
               
chr20:25686604-25686185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
188-501
               

               
Cow position:
               
chr20:24521505-24521825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
188-612
               

               
Cow position:
               
chr20:6096731-6096306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
188-671
               

               
Cow position:
               
chr20:21714506-21715019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
188-714
               

               
Cow position:
               
chr20:19328154-19328668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
190-581
               

               
Cow position:
               
chr20:40127580-40127184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
191-501
               

               
Cow position:
               
chr20:41452057-41451734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 300
               

               
Conread position:
               
192-581
               

               
Cow position:
               
chr20:30817289-30817677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
193-399
               

               
Cow position:
               
chr20:18423474-18423689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
194-472
               

               
Cow position:
               
chr20:17734013-17733735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
195-590
               

               
Cow position:
               
chr20:10200102-10200514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
199-649
               

               
Cow position:
               
chr20:15549136-15548685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
204-522
               

               
Cow position:
               
chr20:39019461-39019796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
204-605
               

               
Cow position:
               
chr20:29805894-29805477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
210-570
               

               
Cow position:
               
chr20:14572586-14572216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
210-573
               

               
Cow position:
               
chr20:14759894-14759514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
210-590
               

               
Cow position:
               
chr20:12205942-12205566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
210-592
               

               
Cow position:
               
chr20:11741535-11741135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
210-594
               

               
Cow position:
               
chr20:15074060-15073666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
212-472
               

               
Cow position:
               
chr20:9988363-9988626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
213-581
               

               
Cow position:
               
chr20:41703929-41704314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr20:9729874-9730052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
174, 83
               

               
Conread position:
               
216-591
               

               
Cow position:
               
chr20:8556496-8556100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 234
               

               
Conread position:
               
216-649
               

               
Cow position:
               
chr20:5826711-5827167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 277
               

               
Conread position:
               
218-479
               

               
Cow position:
               
chr20:23936637-23936352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
220-494
               

               
Cow position:
               
chr20:11923460-11923177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
220-581
               

               
Cow position:
               
chr20:38817790-38818155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
220-585
               

               
Cow position:
               
chr20:6903108-6903477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
220-586
               

               
Cow position:
               
chr20:39405547-39405925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
220-588
               

               
Cow position:
               
chr20:28982477-28982867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 316
               

               
Conread position:
               
220-591
               

               
Cow position:
               
chr20:13829046-13829431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
32, 296
               

               
Conread position:
               
220-592
               

               
Cow position:
               
chr20:4205742-4206137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 351
               

               
Conread position:
               
220-592
               

               
Cow position:
               
chr20:26076864-26077253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 165
               

               
Conread position:
               
220-606
               

               
Cow position:
               
chr20:40781752-40782143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
220-642
               

               
Cow position:
               
chr20:38578975-38578550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 192
               

               
Conread position:
               
221-424
               

               
Cow position:
               
chr20:5025522-5025307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
221-468
               

               
Cow position:
               
chr20:20312957-20312705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
221-479
               

               
Cow position:
               
chr20:29633211-29632947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
221-505
               

               
Cow position:
               
chr20:23505609-23505908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
221-512
               

               
Cow position:
               
chr20:14735457-14735759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 221
               

               
Conread position:
               
221-538
               

               
Cow position:
               
chr20:22007284-22007599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 219
               

               
Conread position:
               
221-580
               

               
Cow position:
               
chr20:12420841-12420462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 167
               

               
Conread position:
               
221-590
               

               
Cow position:
               
chr20:34776966-34777350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
221-590
               

               
Cow position:
               
chr20:35907265-35906882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
221-591
               

               
Cow position:
               
chr20:7442344-7441969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
221-591
               

               
Cow position:
               
chr20:18551143-18551531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
221-606
               

               
Cow position:
               
chr20:40185893-40185491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 287
               

               
Conread position:
               
221-626
               

               
Cow position:
               
chr20:10838439-10838008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
222-600
               

               
Cow position:
               
chr20:38768672-38768286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 218
               

               
Conread position:
               
223-505
               

               
Cow position:
               
chr20:40256752-40257050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
223-569
               

               
Cow position:
               
chr20:18618421-18618766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
223-580
               

               
Cow position:
               
chr20:40511975-40511598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
223-581
               

               
Cow position:
               
chr20:42469548-42469918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
224-480
               

               
Cow position:
               
chr20:26679907-26680179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
224-650
               

               
Cow position:
               
chr20:6890488-6890948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 181
               

               
Conread position:
               
225-571
               

               
Cow position:
               
chr20:15235548-15235901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 223
               

               
Conread position:
               
225-590
               

               
Cow position:
               
chr20:6054728-6054341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
226-588
               

               
Cow position:
               
chr20:28604991-28605375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
226-591
               

               
Cow position:
               
chr20:4756040-4755664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
227-468
               

               
Cow position:
               
chr20:6848408-6848673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
229-453
               

               
Cow position:
               
chr20:8020683-8020926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 191
               

               
Conread position:
               
229-590
               

               
Cow position:
               
chr20:34251890-34251504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 203
               

               
Conread position:
               
230-578
               

               
Cow position:
               
chr20:27001183-27001542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 209
               

               
Conread position:
               
231-586
               

               
Cow position:
               
chr20:28296080-28296459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 242
               

               
Conread position:
               
238-590
               

               
Cow position:
               
chr20:20967141-20967489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 58
               

               
Conread position:
               
242-587
               

               
Cow position:
               
chr20:10208605-10208973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 167
               

               
Conread position:
               
245-650
               

               
Cow position:
               
chr20:9923405-9923796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
246-467
               

               
Cow position:
               
chr20:26469257-26469021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
246-500
               

               
Cow position:
               
chr20:21016283-21016559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 208
               

               
Conread position:
               
246-535
               

               
Cow position:
               
chr20:34918087-34918384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
6, 72
               

               
Conread position:
               
246-676
               

               
Cow position:
               
chr20:3321328-3320898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
247-588
               

               
Cow position:
               
chr20:27408069-27407727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 250
               

               
Conread position:
               
248-397
               

               
Cow position:
               
chr20:11043685-11043534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
248-425
               

               
Cow position:
               
chr20:35760482-35760668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
248-447
               

               
Cow position:
               
chr20:33176993-33177210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
248-462
               

               
Cow position:
               
chr20:37200164-37200398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
248-484
               

               
Cow position:
               
chr20:9379220-9379465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 200
               

               
Conread position:
               
248-505
               

               
Cow position:
               
chr20:22704099-22704375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
248-553
               

               
Cow position:
               
chr20:24000968-24000665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
248-569
               

               
Cow position:
               
chr20:15593107-15593433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
248-570
               

               
Cow position:
               
chr20:32084273-32083934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
248-581
               

               
Cow position:
               
chr20:20983818-20984151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
248-588
               

               
Cow position:
               
chr20:13994620-13994980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 183
               

               
Conread position:
               
248-589
               

               
Cow position:
               
chr20:14879598-14879956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr20:34098147-34097785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
248-592
               

               
Cow position:
               
chr20:6602852-6603210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 241
               

               
Conread position:
               
248-606
               

               
Cow position:
               
chr20:39517822-39518189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
47, 314
               

               
Conread position:
               
248-608
               

               
Cow position:
               
chr20:35009930-35009566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
70, 304
               

               
Conread position:
               
248-614
               

               
Cow position:
               
chr20:21928716-21929097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
248-633
               

               
Cow position:
               
chr20:28067615-28067217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
248-654
               

               
Cow position:
               
chr20:15566020-15565604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 216
               

               
Conread position:
               
248-667
               

               
Cow position:
               
chr20:20739478-20739048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 243
               

               
Conread position:
               
249-396
               

               
Cow position:
               
chr20:41119729-41119879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
250-590
               

               
Cow position:
               
chr20:3141396-3141741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
251-468
               

               
Cow position:
               
chr20:24391794-24392021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 123
               

               
Conread position:
               
251-538
               

               
Cow position:
               
chr20:39325199-39325507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 135
               

               
Conread position:
               
251-545
               

               
Cow position:
               
chr20:37165540-37165833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 139
               

               
Conread position:
               
251-578
               

               
Cow position:
               
chr20:31323611-31323943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 156
               

               
Conread position:
               
251-578
               

               
Cow position:
               
chr20:34107930-34108261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
251-589
               

               
Cow position:
               
chr20:29754600-29754942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
251-591
               

               
Cow position:
               
chr20:23846858-23846495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
251-607
               

               
Cow position:
               
chr20:11482325-11481949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 318
               

               
Conread position:
               
252-590
               

               
Cow position:
               
chr20:7550056-7550394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 139
               

               
Conread position:
               
253-495
               

               
Cow position:
               
chr20:34364851-34365096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 117
               

               
Conread position:
               
253-501
               

               
Cow position:
               
chr20:11864320-11864057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 192
               

               
Conread position:
               
253-586
               

               
Cow position:
               
chr20:35741569-35741932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
253-590
               

               
Cow position:
               
chr20:12239864-12239515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 174
               

               
Conread position:
               
253-591
               

               
Cow position:
               
chr20:14980698-14980337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 6
               

               
Conread position:
               
254-591
               

               
Cow position:
               
chr20:11045495-11045842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
255-590
               

               
Cow position:
               
chr20:42459034-42458688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
256-570
               

               
Cow position:
               
chr20:11542464-11542139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 209
               

               
Conread position:
               
256-621
               

               
Cow position:
               
chr20:38551193-38551565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
259-472
               

               
Cow position:
               
chr20:37272538-37272761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
263-591
               

               
Cow position:
               
chr20:30710814-30710468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
269-590
               

               
Cow position:
               
chr20:5814400-5814734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
270-583
               

               
Cow position:
               
chr20:41627513-41627180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
270-623
               

               
Cow position:
               
chr20:14100605-14100231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
272-581
               

               
Cow position:
               
chr20:7439014-7438690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
273-582
               

               
Cow position:
               
chr20:14540196-14540503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
274-590
               

               
Cow position:
               
chr20:15312496-15312837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 295
               

               
Conread position:
               
276-541
               

               
Cow position:
               
chr20:32523307-32523583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
277-467
               

               
Cow position:
               
chr20:9701735-9701527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
279-578
               

               
Cow position:
               
chr20:8546915-8547222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
280-590
               

               
Cow position:
               
chr20:40446178-40446498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
280-612
               

               
Cow position:
               
chr20:32988989-32988641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
280-650
               

               
Cow position:
               
chr20:2169865-2169486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
280-671
               

               
Cow position:
               
chr20:20241943-20242339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
282-545
               

               
Cow position:
               
chr20:34084915-34085191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
289-522
               

               
Cow position:
               
chr20:18500071-18500303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
185, 147
               

               
Conread position:
               
290-581
               

               
Cow position:
               
chr20:4334667-4334370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
294-567
               

               
Cow position:
               
chr20:28441192-28441472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 146
               

               
Conread position:
               
300-591
               

               
Cow position:
               
chr20:34221352-34221646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
303-494
               

               
Cow position:
               
chr20:39247784-39247982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
303-570
               

               
Cow position:
               
chr20:8307888-8308164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 265
               

               
Conread position:
               
303-579
               

               
Cow position:
               
chr20:22978193-22978484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
303-581
               

               
Cow position:
               
chr20:4332013-4332293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
303-581
               

               
Cow position:
               
chr20:38847364-38847075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
303-588
               

               
Cow position:
               
chr20:14433553-14433257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
303-589
               

               
Cow position:
               
chr20:22484735-22485026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
303-590
               

               
Cow position:
               
chr20:41089919-41089627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
303-591
               

               
Cow position:
               
chr20:2298902-2298621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
303-620
               

               
Cow position:
               
chr20:5636355-5636679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 132
               

               
Conread position:
               
303-649
               

               
Cow position:
               
chr20:1575974-1576324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
304-589
               

               
Cow position:
               
chr20:13025734-13025443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
304-590
               

               
Cow position:
               
chr20:14917172-14917453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
305-582
               

               
Cow position:
               
chr20:311220-311480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
170, 15
               

               
Conread position:
               
305-624
               

               
Cow position:
               
chr20:21761653-21761974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
320-590
               

               
Cow position:
               
chr20:32463631-32463356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
320-591
               

               
Cow position:
               
chr20:15569056-15568780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
320-592
               

               
Cow position:
               
chr20:11188915-11188637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
320-667
               

               
Cow position:
               
chr20:36633707-36634061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
321-572
               

               
Cow position:
               
chr20:24833985-24834239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
321-573
               

               
Cow position:
               
chr20:12430903-12430650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
321-619
               

               
Cow position:
               
chr20:7362860-7363157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
321-640
               

               
Cow position:
               
chr20:39267068-39266740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
323-537
               

               
Cow position:
               
chr20:19616379-19616607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
326-585
               

               
Cow position:
               
chr20:16491970-16492236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
327-578
               

               
Cow position:
               
chr20:31080939-31081194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
327-608
               

               
Cow position:
               
chr20:9267203-9266926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
328-558
               

               
Cow position:
               
chr20:34901467-34901704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 187
               

               
Conread position:
               
334-671
               

               
Cow position:
               
chr20:33439071-33438726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
335-591
               

               
Cow position:
               
chr20:21428070-21428328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
336-589
               

               
Cow position:
               
chr20:23541251-23540993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
52, 218
               

               
Conread position:
               
338-531
               

               
Cow position:
               
chr20:23103128-23103332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
338-569
               

               
Cow position:
               
chr20:34787035-34786801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
338-589
               

               
Cow position:
               
chr20:20099688-20099434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
340-543
               

               
Cow position:
               
chr20:16096763-16096962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
340-590
               

               
Cow position:
               
chr20:7738316-7738063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
346-555
               

               
Cow position:
               
chr20:17765417-17765198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
346-581
               

               
Cow position:
               
chr20:28594199-28594446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
42, 226
               

               
Conread position:
               
347-566
               

               
Cow position:
               
chr20:22265328-22265108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 130
               

               
Conread position:
               
347-570
               

               
Cow position:
               
chr20:35710089-35710324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr20:36741393-36741631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
347-591
               

               
Cow position:
               
chr20:32866270-32866027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
347-595
               

               
Cow position:
               
chr20:5644704-5644961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 190
               

               
Conread position:
               
350-650
               

               
Cow position:
               
chr20:16548356-16548067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
353-620
               

               
Cow position:
               
chr20:13983286-13983556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
354-589
               

               
Cow position:
               
chr20:5078548-5078794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
355-494
               

               
Cow position:
               
chr20:37357532-37357677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
355-580
               

               
Cow position:
               
chr20:11548796-11548566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
355-586
               

               
Cow position:
               
chr20:28819005-28818771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 166
               

               
Conread position:
               
355-655
               

               
Cow position:
               
chr20:38670684-38670975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
360-591
               

               
Cow position:
               
chr20:38089842-38090082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
362-578
               

               
Cow position:
               
chr20:11359691-11359476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
362-590
               

               
Cow position:
               
chr20:6248663-6248433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
362-590
               

               
Cow position:
               
chr20:20898654-20898422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
362-590
               

               
Cow position:
               
chr20:33067431-33067194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
362-610
               

               
Cow position:
               
chr20:21721168-21721397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
363-590
               

               
Cow position:
               
chr20:11008104-11008338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
363-591
               

               
Cow position:
               
chr20:21345361-21345602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
363-592
               

               
Cow position:
               
chr20:23506536-23506303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 207
               

               
Conread position:
               
363-667
               

               
Cow position:
               
chr20:12085491-12085204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
365-590
               

               
Cow position:
               
chr20:354961-354733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
365-671
               

               
Cow position:
               
chr20:20056549-20056225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
371-587
               

               
Cow position:
               
chr20:39962517-39962740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
17, 193
               

               
Conread position:
               
372-613
               

               
Cow position:
               
chr20:38514724-38514968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
376-576
               

               
Cow position:
               
chr20:9376415-9376623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
376-648
               

               
Cow position:
               
chr20:10772150-10772434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
378-581
               

               
Cow position:
               
chr20:8821773-8821579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
381-590
               

               
Cow position:
               
chr20:39016924-39016704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
384-650
               

               
Cow position:
               
chr20:24902343-24902069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 212
               

               
Conread position:
               
387-591
               

               
Cow position:
               
chr20:16941330-16941119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
390-713
               

               
Cow position:
               
chr20:29990481-29990159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
393-581
               

               
Cow position:
               
chr20:34083686-34083873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
400-718
               

               
Cow position:
               
chr20:7709812-7709475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
403-590
               

               
Cow position:
               
chr20:12534765-12534572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
406-580
               

               
Cow position:
               
chr20:6372582-6372405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
407-570
               

               
Cow position:
               
chr20:14620329-14620153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
407-589
               

               
Cow position:
               
chr20:12126324-12126137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
407-590
               

               
Cow position:
               
chr20:20125050-20124866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
409-650
               

               
Cow position:
               
chr20:40157883-40158134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
415-618
               

               
Cow position:
               
chr20:11043489-11043279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 185
               

               
Conread position:
               
430-589
               

               
Cow position:
               
chr20:14282924-14283087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
431-591
               

               
Cow position:
               
chr20:20158140-20158305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
434-578
               

               
Cow position:
               
chr20:4002103-4002250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
436-591
               

               
Cow position:
               
chr20:30744711-30744553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 151
               

               
Conread position:
               
437-588
               

               
Cow position:
               
chr20:13943776-13943924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
437-591
               

               
Cow position:
               
chr20:23678706-23678546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
438-587
               

               
Cow position:
               
chr20:2743125-2742973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
438-590
               

               
Cow position:
               
chr20:23590735-23590581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
438-595
               

               
Cow position:
               
chr20:361174-361017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
438-623
               

               
Cow position:
               
chr20:35591636-35591451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
439-652
               

               
Cow position:
               
chr20:35208193-35207988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
440-586
               

               
Cow position:
               
chr20:5703485-5703636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
444-590
               

               
Cow position:
               
chr20:5364948-5365094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
445-650
               

               
Cow position:
               
chr20:15589060-15589270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
448-590
               

               
Cow position:
               
chr20:7417145-7416999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
451-619
               

               
Cow position:
               
chr20:11444104-11444273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
465-651
               

               
Cow position:
               
chr20:36671393-36671216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 94
               

               
Conread position:
               
466-591
               

               
Cow position:
               
chr20:27315022-27315146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
467-590
               

               
Cow position:
               
chr20:11920689-11920564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
467-590
               

               
Cow position:
               
chr20:31845244-31845117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
473-590
               

               
Cow position:
               
chr20:2316377-2316257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
474-591
               

               
Cow position:
               
chr20:7155230-7155347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
474-591
               

               
Cow position:
               
chr20:35442233-35442113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
474-649
               

               
Cow position:
               
chr20:7622932-7622750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
482-604
               

               
Cow position:
               
chr20:13617283-13617408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
482-628
               

               
Cow position:
               
chr20:2822927-2823075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
482-640
               

               
Cow position:
               
chr20:35211203-35211042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
482-671
               

               
Cow position:
               
chr20:15846812-15847012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
485-591
               

               
Cow position:
               
chr20:5078332-5078442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
485-623
               

               
Cow position:
               
chr20:26059170-26059030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
489-651
               

               
Cow position:
               
chr20:15515376-15515224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
501-618
               

               
Cow position:
               
chr20:12334414-12334528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
501-671
               

               
Cow position:
               
chr20:15547269-15547447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
501-671
               

               
Cow position:
               
chr20:30027427-30027604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
501-671
               

               
Cow position:
               
chr20:37229005-37228837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 74
               

               
Conread position:
               
501-714
               

               
Cow position:
               
chr20:36023321-36023112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
185, 99
               

               
Conread position:
               
535-671
               

               
Cow position:
               
chr20:8281401-8281532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               
Show alignments to all cow chromosomes.