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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8040N02.3
        

               
Conread position:
               
152-600
               

               
Cow position:
               
chr29:13615977-13615518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
158-445
               

               
Cow position:
               
chr29:45650661-45650369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
158-479
               

               
Cow position:
               
chr29:4327172-4327499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
158-580
               

               
Cow position:
               
chr29:10838628-10839054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
158-590
               

               
Cow position:
               
chr29:26017834-26017379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
158-614
               

               
Cow position:
               
chr29:22935961-22936419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
160-487
               

               
Cow position:
               
chr29:4328114-4328435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
163-581
               

               
Cow position:
               
chr29:36216802-36217226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
164-443
               

               
Cow position:
               
chr29:36037396-36037673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
164-468
               

               
Cow position:
               
chr29:8125909-8125591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
164-468
               

               
Cow position:
               
chr29:35281190-35281495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
164-539
               

               
Cow position:
               
chr29:2188665-2188284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 164
               

               
Conread position:
               
164-566
               

               
Cow position:
               
chr29:9638628-9638221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
164-570
               

               
Cow position:
               
chr29:26616052-26615614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
164-576
               

               
Cow position:
               
chr29:35501961-35501544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 42
               

               
Conread position:
               
164-581
               

               
Cow position:
               
chr29:9709383-9709809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
164-586
               

               
Cow position:
               
chr29:4480490-4480054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
164-590
               

               
Cow position:
               
chr29:465715-465276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
164-590
               

               
Cow position:
               
chr29:16609424-16609871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
164-590
               

               
Cow position:
               
chr29:32733018-32733422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
310, 14
               

               
Conread position:
               
164-591
               

               
Cow position:
               
chr29:45005932-45005505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
167-589
               

               
Cow position:
               
chr29:10058839-10058416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
169-538
               

               
Cow position:
               
chr29:15944259-15944630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
170-540
               

               
Cow position:
               
chr29:36586271-36586640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
170-568
               

               
Cow position:
               
chr29:28868322-28868744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
170-641
               

               
Cow position:
               
chr29:32290293-32290789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
171-494
               

               
Cow position:
               
chr29:7666336-7666006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
171-589
               

               
Cow position:
               
chr29:29056876-29057298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
171-592
               

               
Cow position:
               
chr29:38581662-38582093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
172-468
               

               
Cow position:
               
chr29:37292465-37292776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
173-434
               

               
Cow position:
               
chr29:21000337-21000606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
174-426
               

               
Cow position:
               
chr29:27007815-27008071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
175-373
               

               
Cow position:
               
chr29:29066124-29066325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
175-427
               

               
Cow position:
               
chr29:29477335-29477078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
175-439
               

               
Cow position:
               
chr29:7408192-7407920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
175-439
               

               
Cow position:
               
chr29:21534993-21534708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
175-500
               

               
Cow position:
               
chr29:18781563-18781891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
175-533
               

               
Cow position:
               
chr29:2071871-2071505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
175-587
               

               
Cow position:
               
chr29:24623938-24624369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
175-730
               

               
Cow position:
               
chr29:32800010-32799469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
176-585
               

               
Cow position:
               
chr29:13127412-13127002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
177-386
               

               
Cow position:
               
chr29:40903020-40902808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
177-398
               

               
Cow position:
               
chr29:686492-686261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
177-410
               

               
Cow position:
               
chr29:26519762-26519522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
177-468
               

               
Cow position:
               
chr29:7041136-7040851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
177-479
               

               
Cow position:
               
chr29:9078874-9078565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
177-494
               

               
Cow position:
               
chr29:11684704-11685031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
72, 261
               

               
Conread position:
               
177-497
               

               
Cow position:
               
chr29:9686310-9685980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 273
               

               
Conread position:
               
177-501
               

               
Cow position:
               
chr29:12005065-12004731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
177-503
               

               
Cow position:
               
chr29:17131918-17131586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
177-517
               

               
Cow position:
               
chr29:11136189-11135846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
177-522
               

               
Cow position:
               
chr29:10456853-10456510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
177-524
               

               
Cow position:
               
chr29:14037014-14036670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
177-538
               

               
Cow position:
               
chr29:28883779-28884152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
177-538
               

               
Cow position:
               
chr29:29974743-29975109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 6
               

               
Conread position:
               
177-540
               

               
Cow position:
               
chr29:1307165-1306787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
177-560
               

               
Cow position:
               
chr29:15940939-15940537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
177-560
               

               
Cow position:
               
chr29:26263554-26263929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
177-562
               

               
Cow position:
               
chr29:32521562-32521965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
177-568
               

               
Cow position:
               
chr29:28197309-28196908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr29:5948088-5947695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr29:17607115-17607527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr29:28195817-28195410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 34
               

               
Conread position:
               
177-578
               

               
Cow position:
               
chr29:39567385-39567792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
177-580
               

               
Cow position:
               
chr29:21196951-21196536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
177-586
               

               
Cow position:
               
chr29:21443645-21443219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
177-587
               

               
Cow position:
               
chr29:2744573-2744151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr29:1933861-1933448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr29:4625294-4624876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr29:19761974-19762391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 34
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr29:20626276-20626690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr29:23874156-23874583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr29:25088434-25088865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 278
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr29:32963239-32963660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 208
               

               
Conread position:
               
177-590
               

               
Cow position:
               
chr29:41811875-41811466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr29:2644609-2644186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr29:6635803-6636202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
177-591
               

               
Cow position:
               
chr29:17409033-17409459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
177-603
               

               
Cow position:
               
chr29:4875204-4874746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
177-608
               

               
Cow position:
               
chr29:12309696-12310150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
177-611
               

               
Cow position:
               
chr29:35291798-35292238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 52
               

               
Conread position:
               
177-623
               

               
Cow position:
               
chr29:17543149-17543593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
177-630
               

               
Cow position:
               
chr29:40337829-40337380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
177-642
               

               
Cow position:
               
chr29:6293765-6293301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
177-667
               

               
Cow position:
               
chr29:24952385-24952864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
177-667
               

               
Cow position:
               
chr29:40096664-40097158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
177-671
               

               
Cow position:
               
chr29:19756147-19756623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
177-735
               

               
Cow position:
               
chr29:11398228-11397677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
178-620
               

               
Cow position:
               
chr29:10156589-10156152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
179-491
               

               
Cow position:
               
chr29:16175570-16175255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
179-591
               

               
Cow position:
               
chr29:40583498-40583909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
180-477
               

               
Cow position:
               
chr29:603608-603311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
181-591
               

               
Cow position:
               
chr29:17109671-17110081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 229
               

               
Conread position:
               
182-372
               

               
Cow position:
               
chr29:40894645-40894832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
182-477
               

               
Cow position:
               
chr29:26734737-26735036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
182-505
               

               
Cow position:
               
chr29:6775286-6774962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
182-538
               

               
Cow position:
               
chr29:20674104-20673739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
182-545
               

               
Cow position:
               
chr29:17400-17034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
182-581
               

               
Cow position:
               
chr29:31926586-31926186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
182-592
               

               
Cow position:
               
chr29:45589881-45589468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
182-623
               

               
Cow position:
               
chr29:1325145-1325600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
183-491
               

               
Cow position:
               
chr29:20178425-20178113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
183-505
               

               
Cow position:
               
chr29:28273683-28273355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
183-533
               

               
Cow position:
               
chr29:6925727-6926071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
183-578
               

               
Cow position:
               
chr29:10653044-10653443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
26, 163
               

               
Conread position:
               
183-580
               

               
Cow position:
               
chr29:5892555-5892958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
183-590
               

               
Cow position:
               
chr29:40892009-40891583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 331
               

               
Conread position:
               
183-607
               

               
Cow position:
               
chr29:28775749-28775324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
184-590
               

               
Cow position:
               
chr29:34745948-34745536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
185-589
               

               
Cow position:
               
chr29:87310-86890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
188-671
               

               
Cow position:
               
chr29:6844919-6844424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
188-671
               

               
Cow position:
               
chr29:40299306-40298810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
189-514
               

               
Cow position:
               
chr29:699898-699568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
189-529
               

               
Cow position:
               
chr29:26771152-26771501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
191-671
               

               
Cow position:
               
chr29:750185-749705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
192-590
               

               
Cow position:
               
chr29:35406080-35405669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
194-494
               

               
Cow position:
               
chr29:2522288-2522589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
195-459
               

               
Cow position:
               
chr29:3502776-3503044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
196-587
               

               
Cow position:
               
chr29:40117282-40117691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
196-590
               

               
Cow position:
               
chr29:28674971-28674582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
197-590
               

               
Cow position:
               
chr29:18878785-18878358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
200-542
               

               
Cow position:
               
chr29:40165962-40166319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
200-578
               

               
Cow position:
               
chr29:9911891-9912286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
204-566
               

               
Cow position:
               
chr29:12679875-12680255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
208-588
               

               
Cow position:
               
chr29:109433-109803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 160
               

               
Conread position:
               
209-590
               

               
Cow position:
               
chr29:732346-732738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
210-437
               

               
Cow position:
               
chr29:477831-478070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
210-438
               

               
Cow position:
               
chr29:4065812-4066053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
210-580
               

               
Cow position:
               
chr29:29769621-29769238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
211-581
               

               
Cow position:
               
chr29:25333729-25333347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 110
               

               
Conread position:
               
211-619
               

               
Cow position:
               
chr29:6217821-6217394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
215-591
               

               
Cow position:
               
chr29:23844564-23844962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 205
               

               
Conread position:
               
216-587
               

               
Cow position:
               
chr29:34360062-34359701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
218-526
               

               
Cow position:
               
chr29:18212249-18211939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr29:39111574-39111151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
220-461
               

               
Cow position:
               
chr29:2415076-2414820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
220-469
               

               
Cow position:
               
chr29:3395845-3396106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
220-517
               

               
Cow position:
               
chr29:41747179-41747498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 116
               

               
Conread position:
               
220-538
               

               
Cow position:
               
chr29:14501329-14501664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 183
               

               
Conread position:
               
220-569
               

               
Cow position:
               
chr29:27816108-27816452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
166, 89
               

               
Conread position:
               
220-580
               

               
Cow position:
               
chr29:4120581-4120967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 270
               

               
Conread position:
               
220-590
               

               
Cow position:
               
chr29:7965988-7966366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
220-590
               

               
Cow position:
               
chr29:22069012-22068620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
220-591
               

               
Cow position:
               
chr29:26778619-26779006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
220-591
               

               
Cow position:
               
chr29:41530585-41530973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
220-598
               

               
Cow position:
               
chr29:94810-94441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 241
               

               
Conread position:
               
220-651
               

               
Cow position:
               
chr29:22175428-22175861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 139
               

               
Conread position:
               
221-582
               

               
Cow position:
               
chr29:42364278-42363902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
221-583
               

               
Cow position:
               
chr29:19428404-19428776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
221-589
               

               
Cow position:
               
chr29:44236204-44236574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
221-590
               

               
Cow position:
               
chr29:21933377-21932998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 208
               

               
Conread position:
               
221-668
               

               
Cow position:
               
chr29:12784218-12783772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
221-668
               

               
Cow position:
               
chr29:27668906-27668471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
221-671
               

               
Cow position:
               
chr29:16195588-16196041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
222-581
               

               
Cow position:
               
chr29:37599467-37599106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 185
               

               
Conread position:
               
222-719
               

               
Cow position:
               
chr29:39329837-39329356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
166, 39
               

               
Conread position:
               
223-581
               

               
Cow position:
               
chr29:1556673-1557045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 166
               

               
Conread position:
               
224-589
               

               
Cow position:
               
chr29:22613174-22613549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
225-525
               

               
Cow position:
               
chr29:3704463-3704140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
225-621
               

               
Cow position:
               
chr29:26318934-26319325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
225-667
               

               
Cow position:
               
chr29:42771402-42771830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
226-368
               

               
Cow position:
               
chr29:36356592-36356742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
226-488
               

               
Cow position:
               
chr29:35738529-35738254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
32, 173
               

               
Conread position:
               
228-590
               

               
Cow position:
               
chr29:17222151-17222536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 344
               

               
Conread position:
               
229-585
               

               
Cow position:
               
chr29:12761711-12762073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
229-590
               

               
Cow position:
               
chr29:8669099-8669476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
21, 293
               

               
Conread position:
               
230-394
               

               
Cow position:
               
chr29:13458807-13458980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
231-551
               

               
Cow position:
               
chr29:24604402-24604052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
231-578
               

               
Cow position:
               
chr29:4367467-4367837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
231-578
               

               
Cow position:
               
chr29:31594369-31594035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
232-469
               

               
Cow position:
               
chr29:585029-585274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 146
               

               
Conread position:
               
232-479
               

               
Cow position:
               
chr29:16756802-16757062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 203
               

               
Conread position:
               
232-581
               

               
Cow position:
               
chr29:43495811-43496154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
233-605
               

               
Cow position:
               
chr29:13639615-13639227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 192
               

               
Conread position:
               
236-589
               

               
Cow position:
               
chr29:7956229-7955868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
73, 133
               

               
Conread position:
               
236-591
               

               
Cow position:
               
chr29:25737662-25737289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
236-649
               

               
Cow position:
               
chr29:8926704-8926287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
242-591
               

               
Cow position:
               
chr29:40852693-40853054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 147
               

               
Conread position:
               
244-616
               

               
Cow position:
               
chr29:6286395-6286015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 202
               

               
Conread position:
               
245-591
               

               
Cow position:
               
chr29:31928743-31929111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
246-455
               

               
Cow position:
               
chr29:21236880-21237097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
6, 171
               

               
Conread position:
               
246-533
               

               
Cow position:
               
chr29:26986706-26986995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
246-590
               

               
Cow position:
               
chr29:34744853-34744506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 161
               

               
Conread position:
               
248-519
               

               
Cow position:
               
chr29:24119970-24119687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
248-533
               

               
Cow position:
               
chr29:9139175-9139487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
248-534
               

               
Cow position:
               
chr29:36183042-36183348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
70, 45
               

               
Conread position:
               
248-538
               

               
Cow position:
               
chr29:19389253-19389549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
248-542
               

               
Cow position:
               
chr29:14615491-14615188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
248-542
               

               
Cow position:
               
chr29:24103782-24103466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 183
               

               
Conread position:
               
248-545
               

               
Cow position:
               
chr29:17668262-17668565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 123
               

               
Conread position:
               
248-564
               

               
Cow position:
               
chr29:23984196-23983858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
248-566
               

               
Cow position:
               
chr29:16309517-16309840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
248-567
               

               
Cow position:
               
chr29:2984651-2984990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
248-569
               

               
Cow position:
               
chr29:22162484-22162147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
248-572
               

               
Cow position:
               
chr29:4520102-4520439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 266
               

               
Conread position:
               
248-578
               

               
Cow position:
               
chr29:4194354-4194017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
248-580
               

               
Cow position:
               
chr29:21706608-21706287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
248-580
               

               
Cow position:
               
chr29:34297798-34297455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
63, 119
               

               
Conread position:
               
248-585
               

               
Cow position:
               
chr29:356093-356439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
248-586
               

               
Cow position:
               
chr29:19254056-19253710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 201
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr29:11915583-11915943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr29:34773961-34773612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
248-591
               

               
Cow position:
               
chr29:19949076-19949431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
248-610
               

               
Cow position:
               
chr29:44378652-44378275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 281
               

               
Conread position:
               
248-612
               

               
Cow position:
               
chr29:13028224-13028582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
248-614
               

               
Cow position:
               
chr29:26329981-26330343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
248-620
               

               
Cow position:
               
chr29:20903521-20903133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
61, 124
               

               
Conread position:
               
248-653
               

               
Cow position:
               
chr29:11704889-11705297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 124
               

               
Conread position:
               
248-671
               

               
Cow position:
               
chr29:22714961-22714524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 248
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr29:39642944-39643203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
251-477
               

               
Cow position:
               
chr29:11696304-11696537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
251-556
               

               
Cow position:
               
chr29:868542-868864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
251-578
               

               
Cow position:
               
chr29:27858561-27858898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
54, 249
               

               
Conread position:
               
251-590
               

               
Cow position:
               
chr29:23697748-23698099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 196
               

               
Conread position:
               
251-590
               

               
Cow position:
               
chr29:40763915-40763571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 140
               

               
Conread position:
               
252-575
               

               
Cow position:
               
chr29:1229379-1229715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
252-650
               

               
Cow position:
               
chr29:25474678-25475094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 361
               

               
Conread position:
               
253-569
               

               
Cow position:
               
chr29:19821068-19821385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 63
               

               
Conread position:
               
256-587
               

               
Cow position:
               
chr29:3711161-3711494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 194
               

               
Conread position:
               
256-593
               

               
Cow position:
               
chr29:1395380-1395710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
259-492
               

               
Cow position:
               
chr29:2532839-2533081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 135
               

               
Conread position:
               
261-540
               

               
Cow position:
               
chr29:39280011-39280294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
261-583
               

               
Cow position:
               
chr29:463874-463537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 131
               

               
Conread position:
               
264-590
               

               
Cow position:
               
chr29:35677762-35677420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 310
               

               
Conread position:
               
270-568
               

               
Cow position:
               
chr29:6337451-6337768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
270-649
               

               
Cow position:
               
chr29:38580764-38581152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 328
               

               
Conread position:
               
271-579
               

               
Cow position:
               
chr29:31489109-31489431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 170
               

               
Conread position:
               
272-557
               

               
Cow position:
               
chr29:44682300-44682014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
273-588
               

               
Cow position:
               
chr29:30440717-30441058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 296
               

               
Conread position:
               
274-591
               

               
Cow position:
               
chr29:22778389-22778048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
275-618
               

               
Cow position:
               
chr29:26654237-26653892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
278-570
               

               
Cow position:
               
chr29:17154572-17154881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
281-591
               

               
Cow position:
               
chr29:11433922-11434241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
284-581
               

               
Cow position:
               
chr29:11054051-11053745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
285-590
               

               
Cow position:
               
chr29:28979676-28979380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
289-627
               

               
Cow position:
               
chr29:6870977-6870611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 333
               

               
Conread position:
               
291-595
               

               
Cow position:
               
chr29:4085138-4085437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
292-672
               

               
Cow position:
               
chr29:11646914-11647301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
303-531
               

               
Cow position:
               
chr29:44988951-44988726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
303-532
               

               
Cow position:
               
chr29:9718942-9718707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 179
               

               
Conread position:
               
303-538
               

               
Cow position:
               
chr29:28587284-28587523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
303-570
               

               
Cow position:
               
chr29:10818606-10818347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 171
               

               
Conread position:
               
303-581
               

               
Cow position:
               
chr29:27588752-27589037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 177
               

               
Conread position:
               
303-590
               

               
Cow position:
               
chr29:37618136-37618429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
303-613
               

               
Cow position:
               
chr29:5186668-5186348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr29:4494956-4495145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
304-569
               

               
Cow position:
               
chr29:27826353-27826622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
304-578
               

               
Cow position:
               
chr29:22029107-22028844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
304-588
               

               
Cow position:
               
chr29:25815004-25814716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
304-614
               

               
Cow position:
               
chr29:32211228-32210924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
304-651
               

               
Cow position:
               
chr29:4334555-4334904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 199
               

               
Conread position:
               
306-586
               

               
Cow position:
               
chr29:28166383-28166103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
311-569
               

               
Cow position:
               
chr29:27329730-27329994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
320-491
               

               
Cow position:
               
chr29:25432249-25432416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
320-588
               

               
Cow position:
               
chr29:2055906-2056182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
320-590
               

               
Cow position:
               
chr29:25091958-25092229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
320-591
               

               
Cow position:
               
chr29:12025625-12025352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
320-613
               

               
Cow position:
               
chr29:29314809-29314515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 230
               

               
Conread position:
               
320-617
               

               
Cow position:
               
chr29:26416206-26416498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
321-539
               

               
Cow position:
               
chr29:10018421-10018651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
321-615
               

               
Cow position:
               
chr29:40960001-40959700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
322-619
               

               
Cow position:
               
chr29:23244032-23243723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 147
               

               
Conread position:
               
323-538
               

               
Cow position:
               
chr29:31674479-31674704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
323-590
               

               
Cow position:
               
chr29:17296980-17297259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 247
               

               
Conread position:
               
323-623
               

               
Cow position:
               
chr29:24252087-24252388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
65, 163
               

               
Conread position:
               
324-527
               

               
Cow position:
               
chr29:43956743-43956952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
324-607
               

               
Cow position:
               
chr29:18404267-18403978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
327-579
               

               
Cow position:
               
chr29:35084370-35084110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
329-571
               

               
Cow position:
               
chr29:44008927-44008681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 136
               

               
Conread position:
               
330-538
               

               
Cow position:
               
chr29:24045846-24046067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
330-554
               

               
Cow position:
               
chr29:4052128-4051904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
336-543
               

               
Cow position:
               
chr29:25284600-25284386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
338-581
               

               
Cow position:
               
chr29:36220391-36220648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
347-591
               

               
Cow position:
               
chr29:34359107-34358854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
347-671
               

               
Cow position:
               
chr29:30188467-30188145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr29:29795513-29795309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 113
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr29:3825851-3826095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr29:32925976-32926225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr29:30227393-30227159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
355-570
               

               
Cow position:
               
chr29:12626098-12625873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
355-590
               

               
Cow position:
               
chr29:21941480-21941724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
355-592
               

               
Cow position:
               
chr29:3685630-3685388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
363-589
               

               
Cow position:
               
chr29:7310577-7310795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
363-589
               

               
Cow position:
               
chr29:40995001-40994769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
364-558
               

               
Cow position:
               
chr29:23389666-23389466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
365-617
               

               
Cow position:
               
chr29:847750-847493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
367-578
               

               
Cow position:
               
chr29:6015015-6015237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
372-648
               

               
Cow position:
               
chr29:13373198-13373480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
373-575
               

               
Cow position:
               
chr29:27873503-27873709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
375-589
               

               
Cow position:
               
chr29:23825572-23825794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
382-580
               

               
Cow position:
               
chr29:23813127-23812926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
382-605
               

               
Cow position:
               
chr29:20770252-20770481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 224
               

               
Conread position:
               
387-590
               

               
Cow position:
               
chr29:32894182-32894385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
389-548
               

               
Cow position:
               
chr29:36830276-36830439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
393-590
               

               
Cow position:
               
chr29:20167344-20167548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
400-531
               

               
Cow position:
               
chr29:13486878-13487015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
400-590
               

               
Cow position:
               
chr29:7103484-7103681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
400-611
               

               
Cow position:
               
chr29:13867283-13867068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 155
               

               
Conread position:
               
400-652
               

               
Cow position:
               
chr29:8004994-8004751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
400-669
               

               
Cow position:
               
chr29:31813877-31814144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
402-590
               

               
Cow position:
               
chr29:32656362-32656557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
407-588
               

               
Cow position:
               
chr29:5210422-5210612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
407-589
               

               
Cow position:
               
chr29:38348095-38347907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
407-590
               

               
Cow position:
               
chr29:18450199-18450017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
407-590
               

               
Cow position:
               
chr29:27911527-27911713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 125
               

               
Conread position:
               
407-590
               

               
Cow position:
               
chr29:27926710-27926896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 125
               

               
Conread position:
               
407-591
               

               
Cow position:
               
chr29:43183374-43183189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
407-613
               

               
Cow position:
               
chr29:2263061-2262848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
407-651
               

               
Cow position:
               
chr29:22519194-22518950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
29, 145
               

               
Conread position:
               
408-587
               

               
Cow position:
               
chr29:42630058-42630239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 156
               

               
Conread position:
               
408-650
               

               
Cow position:
               
chr29:5995164-5994927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
409-589
               

               
Cow position:
               
chr29:30548711-30548898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
409-591
               

               
Cow position:
               
chr29:501137-501321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
409-671
               

               
Cow position:
               
chr29:29324476-29324234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
412-587
               

               
Cow position:
               
chr29:43544661-43544483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 68
               

               
Conread position:
               
413-590
               

               
Cow position:
               
chr29:15947109-15947290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
425-587
               

               
Cow position:
               
chr29:27819174-27819339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
426-650
               

               
Cow position:
               
chr29:11042385-11042607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
430-570
               

               
Cow position:
               
chr29:30918506-30918652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
430-667
               

               
Cow position:
               
chr29:683531-683281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
434-588
               

               
Cow position:
               
chr29:40791273-40791424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
434-591
               

               
Cow position:
               
chr29:9310563-9310724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
436-624
               

               
Cow position:
               
chr29:18556637-18556830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
437-590
               

               
Cow position:
               
chr29:24188099-24187942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
437-591
               

               
Cow position:
               
chr29:44684069-44684221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
437-593
               

               
Cow position:
               
chr29:5520519-5520359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
437-603
               

               
Cow position:
               
chr29:31981797-31981966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
438-587
               

               
Cow position:
               
chr29:5788996-5789149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
438-591
               

               
Cow position:
               
chr29:42883991-42883833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
439-586
               

               
Cow position:
               
chr29:21645286-21645428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
439-590
               

               
Cow position:
               
chr29:396381-396529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
439-591
               

               
Cow position:
               
chr29:4070596-4070748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
439-595
               

               
Cow position:
               
chr29:4423471-4423309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
439-721
               

               
Cow position:
               
chr29:16365920-16365629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
440-569
               

               
Cow position:
               
chr29:8686299-8686432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
440-589
               

               
Cow position:
               
chr29:36357098-36357248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
442-644
               

               
Cow position:
               
chr29:31934350-31934556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 165
               

               
Conread position:
               
450-590
               

               
Cow position:
               
chr29:1220152-1220008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
452-600
               

               
Cow position:
               
chr29:34517502-34517356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
452-650
               

               
Cow position:
               
chr29:34760432-34760240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
452-700
               

               
Cow position:
               
chr29:11527808-11527558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 141
               

               
Conread position:
               
454-591
               

               
Cow position:
               
chr29:19176930-19176783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
454-591
               

               
Cow position:
               
chr29:24051398-24051258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
456-592
               

               
Cow position:
               
chr29:21592693-21592831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
458-580
               

               
Cow position:
               
chr29:37046714-37046588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
460-604
               

               
Cow position:
               
chr29:22735116-22734971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
462-623
               

               
Cow position:
               
chr29:16672482-16672644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
468-710
               

               
Cow position:
               
chr29:3590464-3590714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
474-581
               

               
Cow position:
               
chr29:629542-629652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
474-590
               

               
Cow position:
               
chr29:19187030-19187149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
474-591
               

               
Cow position:
               
chr29:40615489-40615373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
482-588
               

               
Cow position:
               
chr29:43088323-43088427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
482-622
               

               
Cow position:
               
chr29:28559392-28559535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
482-649
               

               
Cow position:
               
chr29:18579823-18579659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
482-650
               

               
Cow position:
               
chr29:33393690-33393849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
484-620
               

               
Cow position:
               
chr29:17022164-17022302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
484-650
               

               
Cow position:
               
chr29:29940654-29940829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
485-592
               

               
Cow position:
               
chr29:37293054-37293160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
486-650
               

               
Cow position:
               
chr29:19061758-19061600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
501-591
               

               
Cow position:
               
chr29:17663727-17663637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.