Cow genome map

Conread name: Ss1.1-Pig4-TMW8040N02.3

Conread position: 124-577
Cow position: chr6:6596263-6596724 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 300
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 37, 82

Conread position: 157-468
Cow position: chr6:22877437-22877117 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 56

Conread position: 158-505
Cow position: chr6:9375653-9375304 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 91, 58

Conread position: 158-559
Cow position: chr6:62925274-62924867 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 69

Conread position: 158-572
Cow position: chr6:47305046-47305486 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 398

Conread position: 158-620
Cow position: chr6:6343146-6343625 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 70

Conread position: 164-377
Cow position: chr6:3936272-3936485 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 37

Conread position: 164-470
Cow position: chr6:46205743-46206054 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 69

Conread position: 164-472
Cow position: chr6:5958290-5957985 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 15, 46

Conread position: 164-538
Cow position: chr6:10332381-10331988 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 202

Conread position: 164-588
Cow position: chr6:6060832-6060410 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 54

Conread position: 164-588
Cow position: chr6:33302136-33302558 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 164-590
Cow position: chr6:52478717-52478245 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 320
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 164-590
Cow position: chr6:54867237-54867682 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 38

Conread position: 164-591
Cow position: chr6:36195939-36196376 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 304
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 48

Conread position: 164-591
Cow position: chr6:39358613-39358176 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 302
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 50

Conread position: 164-642
Cow position: chr6:7131146-7130667 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 340
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 42

Conread position: 164-644
Cow position: chr6:456906-457394 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 80

Conread position: 164-649
Cow position: chr6:8209860-8209374 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 40

Conread position: 164-714
Cow position: chr6:18049300-18048731 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 166-393
Cow position: chr6:10649291-10649063 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 56

Conread position: 166-490
Cow position: chr6:50120058-50119720 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 40

Conread position: 166-517
Cow position: chr6:8804816-8804439 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 166-587
Cow position: chr6:18447781-18447356 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 52

Conread position: 167-398
Cow position: chr6:19508702-19508474 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 12, 36

Conread position: 167-427
Cow position: chr6:40264469-40264203 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 39

Conread position: 167-500
Cow position: chr6:642848-642498 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 50

Conread position: 167-578
Cow position: chr6:11169437-11169855 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 44

Conread position: 169-591
Cow position: chr6:44078247-44078680 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 53

Conread position: 170-458
Cow position: chr6:54647790-54647492 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 47

Conread position: 170-512
Cow position: chr6:606994-607350 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 39

Conread position: 170-569
Cow position: chr6:31525784-31526190 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 42

Conread position: 170-578
Cow position: chr6:27851971-27851555 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 39

Conread position: 170-590
Cow position: chr6:28147983-28148420 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 9, 51

Conread position: 170-661
Cow position: chr6:35103592-35103094 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 34

Conread position: 170-667
Cow position: chr6:51674642-51675153 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 187

Conread position: 171-307
Cow position: chr6:33509309-33509448 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 171-494
Cow position: chr6:28148580-28148901 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 46

Conread position: 171-557
Cow position: chr6:53401105-53401487 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 45

Conread position: 171-579
Cow position: chr6:28482749-28483170 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 61

Conread position: 171-581
Cow position: chr6:42961633-42961207 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 284
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 134, 53

Conread position: 171-590
Cow position: chr6:51835134-51835561 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 171-605
Cow position: chr6:6264380-6264835 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 33

Conread position: 171-691
Cow position: chr6:47339622-47339082 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 40

Conread position: 174-397
Cow position: chr6:46666843-46667077 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 29

Conread position: 174-468
Cow position: chr6:23986999-23986706 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 30

Conread position: 174-494
Cow position: chr6:36928390-36928727 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 75, 38

Conread position: 174-590
Cow position: chr6:6067951-6067536 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 175-477
Cow position: chr6:9733093-9732792 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 41

Conread position: 175-517
Cow position: chr6:11192714-11192372 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 41

Conread position: 175-564
Cow position: chr6:63272879-63272473 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 75, 35

Conread position: 175-578
Cow position: chr6:64436604-64436179 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 273
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 361

Conread position: 175-590
Cow position: chr6:8562454-8562886 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 52

Conread position: 175-591
Cow position: chr6:46465566-46465987 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 41

Conread position: 175-595
Cow position: chr6:29210240-29210659 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 290
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 144, 41

Conread position: 176-625
Cow position: chr6:58073782-58074243 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 318
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 38

Conread position: 177-370
Cow position: chr6:60467768-60467961 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 31

Conread position: 177-374
Cow position: chr6:51071444-51071655 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 44

Conread position: 177-380
Cow position: chr6:55608066-55607865 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 33

Conread position: 177-385
Cow position: chr6:35769742-35769530 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 140, 39

Conread position: 177-394
Cow position: chr6:12623211-12623432 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 33

Conread position: 177-417
Cow position: chr6:25784053-25784287 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 141, 50

Conread position: 177-424
Cow position: chr6:57411386-57411627 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 28

Conread position: 177-427
Cow position: chr6:2012759-2013016 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 60, 44

Conread position: 177-427
Cow position: chr6:24327395-24327144 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 85, 39

Conread position: 177-427
Cow position: chr6:32916180-32915927 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 39

Conread position: 177-432
Cow position: chr6:12927863-12928121 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 140, 10

Conread position: 177-433
Cow position: chr6:32210888-32210625 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 77, 44

Conread position: 177-446
Cow position: chr6:47625219-47624947 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 39

Conread position: 177-459
Cow position: chr6:69500070-69500353 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 77, 39

Conread position: 177-472
Cow position: chr6:67544552-67544253 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 141, 43

Conread position: 177-473
Cow position: chr6:53345536-53345834 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 32

Conread position: 177-479
Cow position: chr6:13741438-13741752 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 14

Conread position: 177-484
Cow position: chr6:47540266-47540587 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 32

Conread position: 177-489
Cow position: chr6:16410936-16411252 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 32

Conread position: 177-489
Cow position: chr6:54293851-54294163 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 132, 50

Conread position: 177-490
Cow position: chr6:47150519-47150854 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 141, 60

Conread position: 177-492
Cow position: chr6:34075767-34076093 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 135, 27

Conread position: 177-494
Cow position: chr6:38233724-38234025 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 177-498
Cow position: chr6:24652440-24652124 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 77, 33

Conread position: 177-501
Cow position: chr6:44372203-44371872 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 38

Conread position: 177-501
Cow position: chr6:50446019-50445695 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 128, 33

Conread position: 177-503
Cow position: chr6:67044710-67045027 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 32

Conread position: 177-511
Cow position: chr6:18961782-18961431 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 60, 31

Conread position: 177-524
Cow position: chr6:16518116-16517779 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 136, 32

Conread position: 177-526
Cow position: chr6:6642848-6642507 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 32

Conread position: 177-529
Cow position: chr6:59597397-59597752 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 31

Conread position: 177-531
Cow position: chr6:48567602-48567246 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 128, 50

Conread position: 177-531
Cow position: chr6:53178380-53178735 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 77, 31

Conread position: 177-538
Cow position: chr6:1770455-1770085 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 32

Conread position: 177-538
Cow position: chr6:14696632-14696252 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 271
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 39

Conread position: 177-538
Cow position: chr6:50746717-50747110 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 41

Conread position: 177-540
Cow position: chr6:35471786-35471395 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 39

Conread position: 177-542
Cow position: chr6:2607354-2607723 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 127, 22

Conread position: 177-542
Cow position: chr6:34549149-34549518 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 246
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 141, 44

Conread position: 177-559
Cow position: chr6:28811255-28810865 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 258
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 51

Conread position: 177-569
Cow position: chr6:4864798-4864403 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 47

Conread position: 177-570
Cow position: chr6:18987957-18988354 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 39

Conread position: 177-570
Cow position: chr6:49422042-49421647 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 44

Conread position: 177-571
Cow position: chr6:56842900-56843300 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 74, 42

Conread position: 177-574
Cow position: chr6:12337725-12338148 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 177-576
Cow position: chr6:67968890-67968461 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 285
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 77, 27

Conread position: 177-578
Cow position: chr6:16706750-16707165 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 177-578
Cow position: chr6:17414713-17414292 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 285
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 60, 39

Conread position: 177-580
Cow position: chr6:12551008-12551427 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 288
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 33

Conread position: 177-580
Cow position: chr6:38218404-38218821 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 177-581
Cow position: chr6:12500597-12501005 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 48

Conread position: 177-581
Cow position: chr6:42565426-42565843 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 33

Conread position: 177-581
Cow position: chr6:49398876-49398463 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 289
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 130, 50

Conread position: 177-583
Cow position: chr6:19681776-19681367 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 41

Conread position: 177-583
Cow position: chr6:24004287-24004693 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 49

Conread position: 177-583
Cow position: chr6:63047316-63047750 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 32

Conread position: 177-585
Cow position: chr6:55474990-55475415 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 33

Conread position: 177-587
Cow position: chr6:16700002-16700413 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 128, 34

Conread position: 177-587
Cow position: chr6:25407666-25407230 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 275

Conread position: 177-587
Cow position: chr6:35842401-35842819 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 43

Conread position: 177-589
Cow position: chr6:15938124-15937691 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 177-590
Cow position: chr6:2546983-2547421 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 308
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 78, 32

Conread position: 177-590
Cow position: chr6:7801625-7801233 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 292
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 39

Conread position: 177-590
Cow position: chr6:13367040-13367450 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 34

Conread position: 177-590
Cow position: chr6:21587681-21587266 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 39

Conread position: 177-590
Cow position: chr6:23695738-23696165 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 177-590
Cow position: chr6:40031934-40032355 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 177-590
Cow position: chr6:46557798-46558222 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 289
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 132, 39

Conread position: 177-590
Cow position: chr6:54365583-54365167 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 32

Conread position: 177-590
Cow position: chr6:61515457-61515028 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 177-591
Cow position: chr6:611307-611710 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 298
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 132, 27

Conread position: 177-591
Cow position: chr6:15305329-15305736 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 25

Conread position: 177-591
Cow position: chr6:21004396-21004841 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 315
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 59, 50

Conread position: 177-591
Cow position: chr6:32867466-32867053 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 290
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 74, 39

Conread position: 177-591
Cow position: chr6:64431682-64432104 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 27

Conread position: 177-591
Cow position: chr6:65870764-65871202 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 177-593
Cow position: chr6:21534799-21535206 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 177-608
Cow position: chr6:24781823-24781378 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 39

Conread position: 177-617
Cow position: chr6:31635947-31635491 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 313
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 115, 32

Conread position: 177-621
Cow position: chr6:36470825-36470368 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 25

Conread position: 177-631
Cow position: chr6:28476918-28477376 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 313
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 81, 44

Conread position: 177-632
Cow position: chr6:26728786-26728330 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 50

Conread position: 177-671
Cow position: chr6:60057925-60057411 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 77

Conread position: 177-671
Cow position: chr6:67214482-67214999 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 39

Conread position: 178-506
Cow position: chr6:49410943-49410619 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 215
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 126, 43

Conread position: 178-590
Cow position: chr6:5095813-5095377 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 42

Conread position: 178-590
Cow position: chr6:16765651-16765236 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 281
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 59, 31

Conread position: 179-526
Cow position: chr6:48169687-48170039 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 126, 37

Conread position: 179-578
Cow position: chr6:19427192-19427603 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 277
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 27

Conread position: 181-472
Cow position: chr6:2423493-2423788 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 29

Conread position: 182-353
Cow position: chr6:16397437-16397266 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 145, 45

Conread position: 182-473
Cow position: chr6:20231080-20230782 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 76, 28

Conread position: 182-486
Cow position: chr6:12629763-12630079 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 31

Conread position: 182-505
Cow position: chr6:52248392-52248055 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 45

Conread position: 182-538
Cow position: chr6:48281740-48282105 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 67, 34

Conread position: 182-538
Cow position: chr6:60473879-60474243 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 64

Conread position: 182-570
Cow position: chr6:24031120-24031521 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 56, 28

Conread position: 182-570
Cow position: chr6:37634535-37634940 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 136, 45

Conread position: 182-573
Cow position: chr6:32121656-32122056 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 55, 38

Conread position: 182-578
Cow position: chr6:8637020-8637434 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 71, 27

Conread position: 182-578
Cow position: chr6:13688066-13687661 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 55, 34

Conread position: 182-578
Cow position: chr6:47519796-47520206 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 284
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 127, 28

Conread position: 182-590
Cow position: chr6:67187441-67187849 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 7

Conread position: 182-591
Cow position: chr6:35990476-35990068 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 29

Conread position: 183-386
Cow position: chr6:17068074-17067865 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 20

Conread position: 183-536
Cow position: chr6:66363498-66363124 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 49

Conread position: 183-575
Cow position: chr6:34196402-34195999 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 183-589
Cow position: chr6:53933094-53932684 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 33

Conread position: 183-590
Cow position: chr6:10176552-10176137 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 184-448
Cow position: chr6:29077475-29077746 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 16

Conread position: 184-587
Cow position: chr6:35181506-35181095 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 32

Conread position: 184-591
Cow position: chr6:53460835-53460401 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 184-608
Cow position: chr6:10612609-10613024 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 66

Conread position: 185-472
Cow position: chr6:16737769-16738062 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 133, 42

Conread position: 185-472
Cow position: chr6:62479417-62479117 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 42

Conread position: 188-374
Cow position: chr6:3719257-3719061 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 21

Conread position: 188-479
Cow position: chr6:53710867-53711164 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 33

Conread position: 188-525
Cow position: chr6:46292578-46292248 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 18

Conread position: 188-540
Cow position: chr6:65676008-65676358 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 130, 39

Conread position: 188-589
Cow position: chr6:38771041-38771444 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 188-590
Cow position: chr6:40774602-40774167 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 24

Conread position: 188-591
Cow position: chr6:31535821-31535402 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 281
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 33

Conread position: 188-591
Cow position: chr6:40713748-40713344 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 189-591
Cow position: chr6:15242588-15243002 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 27

Conread position: 189-591
Cow position: chr6:54132571-54132978 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 283
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 13

Conread position: 190-381
Cow position: chr6:12845070-12845260 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 26

Conread position: 190-591
Cow position: chr6:56849771-56850186 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 284
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 20

Conread position: 190-608
Cow position: chr6:67950706-67951131 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 191-585
Cow position: chr6:17090342-17090759 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 288

Conread position: 192-531
Cow position: chr6:130419-130057 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 192-623
Cow position: chr6:1002479-1002068 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 289
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 283, 49

Conread position: 193-550
Cow position: chr6:10695620-10695985 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 61, 18

Conread position: 194-627
Cow position: chr6:54991235-54990801 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 29

Conread position: 197-590
Cow position: chr6:50090392-50090807 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 275
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 203

Conread position: 200-640
Cow position: chr6:13040215-13040646 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 9

Conread position: 203-590
Cow position: chr6:10400131-10399750 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 15

Conread position: 203-591
Cow position: chr6:45690833-45690444 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 8

Conread position: 204-427
Cow position: chr6:39994700-39994464 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 7

Conread position: 204-505
Cow position: chr6:21542080-21542400 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 8, 18

Conread position: 204-586
Cow position: chr6:21110727-21111112 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 7

Conread position: 206-603
Cow position: chr6:14949719-14949301 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 16

Conread position: 207-613
Cow position: chr6:9026279-9026708 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 276
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 317

Conread position: 209-572
Cow position: chr6:56376584-56376202 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 249
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 117

Conread position: 210-395
Cow position: chr6:59302059-59301857 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 22

Conread position: 210-468
Cow position: chr6:25773617-25773346 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 99

Conread position: 210-570
Cow position: chr6:60350534-60350147 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 210-577
Cow position: chr6:66874129-66874501 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 210-581
Cow position: chr6:16103437-16103042 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 274
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 377

Conread position: 210-590
Cow position: chr6:6063513-6063130 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 263
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 44, 103

Conread position: 210-603
Cow position: chr6:68049201-68049593 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 204

Conread position: 211-494
Cow position: chr6:7824529-7824832 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 212-425
Cow position: chr6:66453567-66453794 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 212-504
Cow position: chr6:9322928-9323220 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 9

Conread position: 213-552
Cow position: chr6:23248195-23247839 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 201

Conread position: 213-563
Cow position: chr6:38018043-38018399 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 231
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 151

Conread position: 215-538
Cow position: chr6:54600140-54600461 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 91

Conread position: 216-578
Cow position: chr6:9008839-9008459 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 220-405
Cow position: chr6:51398577-51398772 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 189

Conread position: 220-467
Cow position: chr6:54885137-54884865 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 220-479
Cow position: chr6:45160515-45160249 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 220

Conread position: 220-494
Cow position: chr6:11637969-11637690 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 211

Conread position: 220-552
Cow position: chr6:54369123-54368777 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 201

Conread position: 220-568
Cow position: chr6:20098188-20097816 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 220-580
Cow position: chr6:19401638-19402003 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 161

Conread position: 220-590
Cow position: chr6:61269106-61269477 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 38, 84

Conread position: 220-624
Cow position: chr6:37148975-37149388 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 10

Conread position: 220-650
Cow position: chr6:5302628-5302200 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 113

Conread position: 220-671
Cow position: chr6:21869869-21869401 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 387

Conread position: 221-384
Cow position: chr6:60017845-60018018 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 221-403
Cow position: chr6:10635954-10636140 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 169

Conread position: 221-434
Cow position: chr6:56041845-56041621 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 193

Conread position: 221-460
Cow position: chr6:30826257-30826000 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 221-472
Cow position: chr6:52025874-52025607 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 221-472
Cow position: chr6:67304579-67304848 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 155

Conread position: 221-478
Cow position: chr6:5462271-5462010 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 29, 169

Conread position: 221-569
Cow position: chr6:35613632-35613273 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 88, 33

Conread position: 221-570
Cow position: chr6:36202605-36202964 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 175

Conread position: 221-575
Cow position: chr6:54490963-54490587 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 314

Conread position: 221-578
Cow position: chr6:31564556-31564185 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 32, 145

Conread position: 221-578
Cow position: chr6:45065229-45064864 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 104

Conread position: 221-581
Cow position: chr6:53651818-53652196 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 34, 8

Conread position: 221-587
Cow position: chr6:15301040-15300673 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 190

Conread position: 221-590
Cow position: chr6:66433725-66434116 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 172

Conread position: 221-592
Cow position: chr6:38440959-38441339 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 125

Conread position: 221-598
Cow position: chr6:44194768-44194377 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 191

Conread position: 221-620
Cow position: chr6:66532024-66531628 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 89

Conread position: 221-638
Cow position: chr6:9452992-9452549 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 290
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 85, 190

Conread position: 222-588
Cow position: chr6:7539351-7539735 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 168

Conread position: 223-505
Cow position: chr6:14850932-14850637 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 278

Conread position: 223-564
Cow position: chr6:38614603-38614951 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 98

Conread position: 224-488
Cow position: chr6:34031448-34031721 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 224-553
Cow position: chr6:899504-899165 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 87, 40

Conread position: 224-593
Cow position: chr6:35435783-35436163 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 123

Conread position: 225-510
Cow position: chr6:44098866-44099171 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 225-566
Cow position: chr6:49002943-49002599 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 225-579
Cow position: chr6:4383274-4383632 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 211

Conread position: 225-588
Cow position: chr6:41375534-41375932 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 276
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 225-590
Cow position: chr6:6201226-6201589 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 172

Conread position: 225-591
Cow position: chr6:38853877-38853491 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 266
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 173

Conread position: 225-591
Cow position: chr6:55282508-55282128 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 135

Conread position: 226-446
Cow position: chr6:15923215-15922983 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 226-570
Cow position: chr6:242596-242936 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 28, 90

Conread position: 227-444
Cow position: chr6:30786365-30786141 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 27, 146

Conread position: 230-590
Cow position: chr6:62324776-62325154 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 248
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 257

Conread position: 231-473
Cow position: chr6:48344115-48344377 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 231-580
Cow position: chr6:60442206-60442562 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 118

Conread position: 231-589
Cow position: chr6:8965877-8966261 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 148

Conread position: 231-591
Cow position: chr6:5609653-5609281 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 260
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 23, 165

Conread position: 231-650
Cow position: chr6:54140601-54141023 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 160

Conread position: 231-671
Cow position: chr6:9736852-9736418 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 310
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 124

Conread position: 232-472
Cow position: chr6:24515405-24515155 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 180

Conread position: 232-590
Cow position: chr6:63252130-63251759 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 251
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 21

Conread position: 233-590
Cow position: chr6:445104-445488 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 72, 0

Conread position: 234-673
Cow position: chr6:1886869-1886428 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 299
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 225

Conread position: 235-494
Cow position: chr6:47988981-47989238 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 35

Conread position: 235-551
Cow position: chr6:28084221-28083896 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 142

Conread position: 237-575
Cow position: chr6:32269074-32268738 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 242-590
Cow position: chr6:52412655-52413024 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 251

Conread position: 242-608
Cow position: chr6:528478-528099 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 135

Conread position: 243-631
Cow position: chr6:53519819-53519415 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 5

Conread position: 245-494
Cow position: chr6:60239588-60239329 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 7, 173

Conread position: 245-575
Cow position: chr6:8788232-8787887 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 185

Conread position: 246-508
Cow position: chr6:37467733-37467462 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 59, 125

Conread position: 246-578
Cow position: chr6:65871703-65872041 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 134

Conread position: 246-618
Cow position: chr6:14958543-14958147 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 246-619
Cow position: chr6:42566674-42567048 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 246
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 76

Conread position: 247-591
Cow position: chr6:1703621-1703960 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 58, 147

Conread position: 248-387
Cow position: chr6:21812538-21812685 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 248-444
Cow position: chr6:33276847-33277057 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 248-486
Cow position: chr6:53731329-53731582 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 248-491
Cow position: chr6:37603331-37603564 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 142

Conread position: 248-494
Cow position: chr6:49685393-49685648 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 237

Conread position: 248-504
Cow position: chr6:48187773-48187507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 71

Conread position: 248-511
Cow position: chr6:48425513-48425241 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 187

Conread position: 248-530
Cow position: chr6:20157132-20157438 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 248-540
Cow position: chr6:65702593-65702298 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 147

Conread position: 248-560
Cow position: chr6:28318217-28318531 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 93

Conread position: 248-569
Cow position: chr6:51893697-51893357 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 330

Conread position: 248-570
Cow position: chr6:7190311-7189974 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 106

Conread position: 248-570
Cow position: chr6:21231344-21231670 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 82

Conread position: 248-578
Cow position: chr6:12652014-12652355 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 184

Conread position: 248-578
Cow position: chr6:21737074-21736740 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 47, 117

Conread position: 248-578
Cow position: chr6:38641306-38641645 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 261

Conread position: 248-578
Cow position: chr6:63299218-63298878 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 87

Conread position: 248-581
Cow position: chr6:28977221-28976884 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 129

Conread position: 248-585
Cow position: chr6:3545512-3545839 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 149, 68

Conread position: 248-588
Cow position: chr6:26915138-26915492 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 66, 0

Conread position: 248-589
Cow position: chr6:21062075-21061723 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 67

Conread position: 248-590
Cow position: chr6:12092176-12091827 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 61

Conread position: 248-590
Cow position: chr6:19695614-19695971 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 124

Conread position: 248-590
Cow position: chr6:24110112-24110446 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 136, 70

Conread position: 248-591
Cow position: chr6:16191475-16191837 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 56, 11

Conread position: 248-591
Cow position: chr6:17997507-17997153 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 208

Conread position: 248-591
Cow position: chr6:29239752-29240105 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 311

Conread position: 248-592
Cow position: chr6:21456882-21456503 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 251
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 248-592
Cow position: chr6:53024990-53024637 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 160

Conread position: 248-593
Cow position: chr6:63720007-63720367 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 342

Conread position: 248-608
Cow position: chr6:57405316-57404963 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 63, 17

Conread position: 248-617
Cow position: chr6:59069820-59069425 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 248-621
Cow position: chr6:7989605-7989221 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 57, 17

Conread position: 248-621
Cow position: chr6:66131116-66131499 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 332

Conread position: 248-625
Cow position: chr6:54864859-54864460 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 232

Conread position: 248-650
Cow position: chr6:6098474-6098047 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 375

Conread position: 248-655
Cow position: chr6:65259659-65259263 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 43

Conread position: 248-671
Cow position: chr6:37199737-37199289 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 285

Conread position: 248-671
Cow position: chr6:38207688-38207259 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 186

Conread position: 248-676
Cow position: chr6:29484899-29485325 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 279
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 15

Conread position: 250-590
Cow position: chr6:24468581-24468231 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 40, 190

Conread position: 250-671
Cow position: chr6:6400758-6401192 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 108

Conread position: 251-570
Cow position: chr6:16423510-16423846 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 295

Conread position: 251-576
Cow position: chr6:33918040-33917688 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 44, 311

Conread position: 251-589
Cow position: chr6:65903806-65903461 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 136

Conread position: 251-626
Cow position: chr6:9751229-9750858 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 150

Conread position: 251-628
Cow position: chr6:23532474-23532857 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 54, 154

Conread position: 252-590
Cow position: chr6:50577332-50577686 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 223

Conread position: 252-618
Cow position: chr6:47799110-47799485 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 66

Conread position: 253-590
Cow position: chr6:41733440-41733797 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 174

Conread position: 255-581
Cow position: chr6:46865778-46865436 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 188

Conread position: 256-553
Cow position: chr6:25008530-25008846 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 167

Conread position: 257-588
Cow position: chr6:12668921-12669257 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 182

Conread position: 258-567
Cow position: chr6:26910051-26909731 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 79

Conread position: 258-593
Cow position: chr6:47574723-47575074 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 258-649
Cow position: chr6:5114228-5113846 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 8

Conread position: 259-538
Cow position: chr6:32518054-32517767 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 155

Conread position: 260-650
Cow position: chr6:37783234-37783628 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 137

Conread position: 261-468
Cow position: chr6:18968952-18968741 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 33, 62

Conread position: 261-622
Cow position: chr6:52901062-52901436 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 57, 39

Conread position: 264-578
Cow position: chr6:19012893-19013216 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 73

Conread position: 265-566
Cow position: chr6:47640613-47640291 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 265-581
Cow position: chr6:11246590-11246922 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 6

Conread position: 265-590
Cow position: chr6:8125157-8125491 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 125

Conread position: 265-590
Cow position: chr6:59104433-59104767 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 44, 87

Conread position: 265-593
Cow position: chr6:59798493-59798818 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 39

Conread position: 266-650
Cow position: chr6:35993403-35993810 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 310

Conread position: 267-590
Cow position: chr6:65264708-65264381 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 186

Conread position: 270-477
Cow position: chr6:54287910-54288120 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 47

Conread position: 270-590
Cow position: chr6:27888180-27888515 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 42, 9

Conread position: 270-590
Cow position: chr6:47355654-47355987 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 136

Conread position: 270-591
Cow position: chr6:39093574-39093916 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 70

Conread position: 272-591
Cow position: chr6:19446092-19446416 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 118

Conread position: 273-617
Cow position: chr6:16764809-16764455 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 58

Conread position: 276-494
Cow position: chr6:44984162-44984396 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 277-514
Cow position: chr6:59108779-59109034 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 277-577
Cow position: chr6:26450154-26450465 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 107

Conread position: 277-590
Cow position: chr6:14914402-14914071 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 0

Conread position: 278-550
Cow position: chr6:12543095-12542805 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 0

Conread position: 280-590
Cow position: chr6:17313582-17313900 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 24, 41

Conread position: 280-591
Cow position: chr6:57546376-57546063 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 64

Conread position: 281-578
Cow position: chr6:48112045-48112349 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 37

Conread position: 286-494
Cow position: chr6:57298866-57299081 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 151

Conread position: 289-591
Cow position: chr6:23402131-23401826 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 31

Conread position: 292-648
Cow position: chr6:46283146-46282792 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 97

Conread position: 299-649
Cow position: chr6:61168639-61168966 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 92

Conread position: 300-577
Cow position: chr6:48803768-48803487 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 27

Conread position: 303-489
Cow position: chr6:40834601-40834407 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 303-540
Cow position: chr6:54036263-54036028 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 18

Conread position: 303-552
Cow position: chr6:61608379-61608639 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 303-580
Cow position: chr6:19996493-19996767 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 60, 17

Conread position: 303-590
Cow position: chr6:16316178-16316481 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 29

Conread position: 303-590
Cow position: chr6:31847348-31847076 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 17

Conread position: 303-590
Cow position: chr6:38609840-38610142 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 17

Conread position: 303-590
Cow position: chr6:67323188-67323474 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 13

Conread position: 303-591
Cow position: chr6:15243124-15243421 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 87

Conread position: 303-591
Cow position: chr6:19264627-19264333 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 131

Conread position: 303-591
Cow position: chr6:32287512-32287802 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 85, 13

Conread position: 303-591
Cow position: chr6:38640099-38640399 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 303-591
Cow position: chr6:53841631-53841340 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 80

Conread position: 303-592
Cow position: chr6:60118018-60118314 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 55, 126

Conread position: 304-566
Cow position: chr6:20206149-20206416 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 52, 16

Conread position: 304-581
Cow position: chr6:57571346-57571635 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 304-620
Cow position: chr6:582398-582074 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 12

Conread position: 305-592
Cow position: chr6:60739889-60740181 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 305-601
Cow position: chr6:9219147-9219442 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 58, 15

Conread position: 312-494
Cow position: chr6:5413697-5413888 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 320-487
Cow position: chr6:19351267-19351099 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 144

Conread position: 320-578
Cow position: chr6:12845266-12845532 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 134

Conread position: 320-580
Cow position: chr6:36189584-36189852 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 320-580
Cow position: chr6:58597617-58597350 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 68, 90

Conread position: 320-590
Cow position: chr6:43135057-43134774 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 72

Conread position: 320-606
Cow position: chr6:10225752-10225477 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 100

Conread position: 321-570
Cow position: chr6:6965499-6965255 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 19

Conread position: 321-587
Cow position: chr6:10039609-10039885 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 321-588
Cow position: chr6:21234932-21235206 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 91

Conread position: 321-591
Cow position: chr6:15447316-15447032 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 0

Conread position: 321-610
Cow position: chr6:4692092-4691792 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 237

Conread position: 323-593
Cow position: chr6:59603317-59603042 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 65, 46

Conread position: 323-623
Cow position: chr6:30973942-30974236 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 44

Conread position: 327-578
Cow position: chr6:54573137-54573412 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 328-641
Cow position: chr6:59718691-59719004 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 272

Conread position: 329-570
Cow position: chr6:7119714-7119474 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 59, 46

Conread position: 329-576
Cow position: chr6:60667314-60667561 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 112

Conread position: 330-591
Cow position: chr6:58370650-58370916 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 33, 187

Conread position: 331-575
Cow position: chr6:20196395-20196153 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 32

Conread position: 334-590
Cow position: chr6:3592302-3592562 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 29, 169

Conread position: 344-613
Cow position: chr6:51968978-51969262 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 247

Conread position: 345-575
Cow position: chr6:37462934-37463172 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 43, 55

Conread position: 346-578
Cow position: chr6:143455-143222 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 42, 14

Conread position: 347-575
Cow position: chr6:44867627-44867393 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 25

Conread position: 347-576
Cow position: chr6:6673016-6673258 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 9, 106

Conread position: 347-581
Cow position: chr6:1429553-1429795 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 17

Conread position: 347-581
Cow position: chr6:66375416-66375177 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 86

Conread position: 347-590
Cow position: chr6:9719010-9718749 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 143

Conread position: 347-604
Cow position: chr6:17794842-17794586 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 35

Conread position: 349-591
Cow position: chr6:13565000-13565252 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 210

Conread position: 350-590
Cow position: chr6:19045541-19045787 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 101

Conread position: 352-591
Cow position: chr6:22525250-22525495 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 100

Conread position: 354-612
Cow position: chr6:2623703-2623961 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 109

Conread position: 354-621
Cow position: chr6:23466108-23465840 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 79

Conread position: 355-580
Cow position: chr6:58608517-58608289 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 77

Conread position: 355-587
Cow position: chr6:4468690-4468925 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 114

Conread position: 355-588
Cow position: chr6:24536618-24536368 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 14

Conread position: 355-588
Cow position: chr6:59301862-59301627 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 120, 57

Conread position: 355-590
Cow position: chr6:16288130-16287895 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 80

Conread position: 355-590
Cow position: chr6:21514691-21514443 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 355-590
Cow position: chr6:33509712-33509951 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 355-650
Cow position: chr6:67456641-67456941 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 244

Conread position: 355-671
Cow position: chr6:8599927-8600232 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 77

Conread position: 357-588
Cow position: chr6:37395483-37395237 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 9

Conread position: 358-613
Cow position: chr6:36284167-36284428 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 198

Conread position: 359-651
Cow position: chr6:10224132-10224427 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 25

Conread position: 362-601
Cow position: chr6:17068720-17068469 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 363-578
Cow position: chr6:33929620-33929394 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 363-590
Cow position: chr6:5330345-5330576 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 18

Conread position: 363-650
Cow position: chr6:60516758-60517040 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 48, 224

Conread position: 364-566
Cow position: chr6:61142633-61142421 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 365-581
Cow position: chr6:11830127-11830343 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 57

Conread position: 365-613
Cow position: chr6:9302784-9302533 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 67

Conread position: 367-590
Cow position: chr6:67281831-67282059 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 62

Conread position: 369-721
Cow position: chr6:35896404-35896053 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 51

Conread position: 373-582
Cow position: chr6:68652411-68652194 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 5

Conread position: 374-590
Cow position: chr6:51530245-51530023 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 63

Conread position: 375-652
Cow position: chr6:18144135-18144414 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 229

Conread position: 378-589
Cow position: chr6:16352401-16352190 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 85

Conread position: 384-590
Cow position: chr6:56986694-56986486 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 66

Conread position: 386-591
Cow position: chr6:55417573-55417362 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 64

Conread position: 387-590
Cow position: chr6:47958771-47958977 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 12

Conread position: 388-590
Cow position: chr6:62437370-62437579 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 388-622
Cow position: chr6:51399040-51399270 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 46

Conread position: 389-570
Cow position: chr6:47885064-47884885 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 10, 109

Conread position: 389-581
Cow position: chr6:67451415-67451215 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 389-620
Cow position: chr6:55535792-55535558 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 10, 146

Conread position: 397-628
Cow position: chr6:53089976-53090208 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 13

Conread position: 400-570
Cow position: chr6:32853156-32853332 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 400-591
Cow position: chr6:2584911-2585108 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 400-615
Cow position: chr6:19131399-19131619 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 206

Conread position: 407-577
Cow position: chr6:41656067-41655890 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 407-590
Cow position: chr6:57089173-57089366 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 184

Conread position: 407-591
Cow position: chr6:41015000-41014813 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 23

Conread position: 407-598
Cow position: chr6:57287683-57287489 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 10

Conread position: 407-600
Cow position: chr6:12964829-12965030 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 413-588
Cow position: chr6:35319153-35318971 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 140

Conread position: 416-628
Cow position: chr6:60451407-60451632 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 417-590
Cow position: chr6:32453373-32453549 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 130

Conread position: 418-590
Cow position: chr6:48379628-48379449 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 418-651
Cow position: chr6:48468987-48469214 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 149

Conread position: 425-572
Cow position: chr6:36011901-36012049 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 430-591
Cow position: chr6:1475345-1475510 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 155

Conread position: 430-686
Cow position: chr6:46330926-46331194 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 74

Conread position: 432-587
Cow position: chr6:21467261-21467106 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 68

Conread position: 432-590
Cow position: chr6:58304416-58304578 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 148

Conread position: 436-616
Cow position: chr6:7568130-7568315 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 143

Conread position: 436-645
Cow position: chr6:41937266-41937050 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 39, 120

Conread position: 437-588
Cow position: chr6:67806007-67805852 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 130
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 437-671
Cow position: chr6:49096443-49096201 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 438-581
Cow position: chr6:43787902-43787755 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 438-590
Cow position: chr6:48435844-48435994 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 15

Conread position: 438-591
Cow position: chr6:54127804-54127650 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 94

Conread position: 438-591
Cow position: chr6:61575834-61575985 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 37

Conread position: 439-591
Cow position: chr6:37692761-37692915 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 108

Conread position: 439-591
Cow position: chr6:50504466-50504622 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 440-590
Cow position: chr6:33450959-33450811 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 69

Conread position: 440-590
Cow position: chr6:57079434-57079588 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 445-590
Cow position: chr6:23610958-23611102 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 92

Conread position: 445-590
Cow position: chr6:65535155-65535006 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 445-591
Cow position: chr6:66947802-66947656 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 55

Conread position: 446-590
Cow position: chr6:31865115-31865257 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 451-618
Cow position: chr6:21066862-21066691 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 146

Conread position: 453-592
Cow position: chr6:30825742-30825602 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 454-591
Cow position: chr6:52044914-52044778 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 71

Conread position: 456-671
Cow position: chr6:36643465-36643260 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 18, 97

Conread position: 460-610
Cow position: chr6:60516656-60516808 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 140

Conread position: 466-590
Cow position: chr6:29853028-29852901 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 469-650
Cow position: chr6:50882624-50882806 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 13, 36

Conread position: 475-667
Cow position: chr6:34569454-34569639 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 90

Conread position: 482-640
Cow position: chr6:49607446-49607601 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 103

Conread position: 482-646
Cow position: chr6:47676065-47676238 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 482-650
Cow position: chr6:67305123-67305290 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 82

Conread position: 482-672
Cow position: chr6:34498796-34498987 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 167, 105

Conread position: 482-713
Cow position: chr6:35702291-35702061 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 113

Conread position: 484-649
Cow position: chr6:139588-139416 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 46

Conread position: 484-650
Cow position: chr6:36516019-36516187 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 109, 0

Conread position: 484-652
Cow position: chr6:53513966-53513796 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 118

Conread position: 491-617
Cow position: chr6:46997731-46997601 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 114

Conread position: 499-590
Cow position: chr6:34463514-34463423 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 500-649
Cow position: chr6:17194286-17194427 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 501-651
Cow position: chr6:38020749-38020889 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 502-614
Cow position: chr6:37603643-37603755 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 108

Conread position: 514-667
Cow position: chr6:13327086-13326930 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 86

Conread position: 528-650
Cow position: chr6:56950303-56950419 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.