Cow genome map

Conread name: Ss1.1-Pig4-TMW8040N02.3

Conread position: 1-497
Cow position: chrX:40647523-40648044 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 214

Conread position: 157-580
Cow position: chrX:3130272-3130713 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 52, 14

Conread position: 157-589
Cow position: chrX:21592990-21593438 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 47

Conread position: 158-369
Cow position: chrX:7382029-7382246 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 60

Conread position: 158-372
Cow position: chrX:25283435-25283224 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 20

Conread position: 158-426
Cow position: chrX:39556111-39555854 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 44

Conread position: 158-578
Cow position: chrX:10866162-10865733 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 304
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 55

Conread position: 158-581
Cow position: chrX:9252469-9252020 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 63

Conread position: 158-585
Cow position: chrX:7645963-7646403 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 55

Conread position: 158-588
Cow position: chrX:41879225-41878784 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 158-590
Cow position: chrX:28847171-28846735 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 311
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 9, 42

Conread position: 158-591
Cow position: chrX:8796956-8797402 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 47

Conread position: 158-591
Cow position: chrX:38094820-38094368 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 61

Conread position: 158-639
Cow position: chrX:36778110-36778598 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 340
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 9, 48

Conread position: 159-591
Cow position: chrX:12309682-12309233 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 44

Conread position: 161-585
Cow position: chrX:17541675-17542106 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 302
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 93, 55

Conread position: 164-358
Cow position: chrX:41192402-41192598 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 48

Conread position: 164-387
Cow position: chrX:2524018-2523785 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 54

Conread position: 164-438
Cow position: chrX:15485913-15485630 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 40

Conread position: 164-486
Cow position: chrX:17497808-17498130 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 54

Conread position: 164-492
Cow position: chrX:35681047-35681393 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 143

Conread position: 164-521
Cow position: chrX:13785666-13785280 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 164-566
Cow position: chrX:34532243-34532648 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 164-570
Cow position: chrX:6543968-6544386 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 164-570
Cow position: chrX:37232124-37232539 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 35

Conread position: 164-580
Cow position: chrX:29289288-29289720 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 54

Conread position: 164-581
Cow position: chrX:14884252-14883812 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 59

Conread position: 164-581
Cow position: chrX:30133612-30133178 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 46

Conread position: 164-586
Cow position: chrX:151613-152048 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 164-588
Cow position: chrX:33639680-33640125 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 164-590
Cow position: chrX:12290449-12290871 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 58

Conread position: 164-590
Cow position: chrX:31489224-31489672 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 164-591
Cow position: chrX:22482977-22482537 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 303
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 54

Conread position: 164-591
Cow position: chrX:30338207-30337800 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 296
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 47

Conread position: 164-592
Cow position: chrX:15007439-15006996 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 65

Conread position: 167-494
Cow position: chrX:28845560-28845886 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 55

Conread position: 167-542
Cow position: chrX:1055672-1055277 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 61

Conread position: 167-568
Cow position: chrX:5638452-5638028 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 300
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 28

Conread position: 167-589
Cow position: chrX:34554446-34554874 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 57

Conread position: 167-590
Cow position: chrX:24424676-24424249 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 291
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 78, 54

Conread position: 167-591
Cow position: chrX:34376673-34377095 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 286
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 44

Conread position: 167-608
Cow position: chrX:47191678-47191239 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 295
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 146, 49

Conread position: 169-493
Cow position: chrX:42874696-42875035 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 48

Conread position: 169-588
Cow position: chrX:34238439-34238872 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 52

Conread position: 169-610
Cow position: chrX:38963830-38964280 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 36

Conread position: 170-307
Cow position: chrX:16531719-16531851 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 40

Conread position: 170-479
Cow position: chrX:11581654-11581971 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 46

Conread position: 170-500
Cow position: chrX:34754473-34754137 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 41

Conread position: 170-575
Cow position: chrX:10412267-10411847 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 39

Conread position: 170-578
Cow position: chrX:25419440-25419013 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 286
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 38

Conread position: 170-586
Cow position: chrX:161146-161559 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 48

Conread position: 170-589
Cow position: chrX:28632759-28632332 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 285
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 56

Conread position: 170-590
Cow position: chrX:14599252-14599684 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 47

Conread position: 170-595
Cow position: chrX:11082894-11082464 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 39

Conread position: 170-611
Cow position: chrX:34401717-34402177 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 46

Conread position: 170-612
Cow position: chrX:4044139-4043694 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 36

Conread position: 170-619
Cow position: chrX:38227371-38226930 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 40

Conread position: 170-620
Cow position: chrX:11718061-11717600 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 47

Conread position: 171-401
Cow position: chrX:23061175-23061402 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 81, 45

Conread position: 171-441
Cow position: chrX:21665870-21665596 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 138, 16

Conread position: 171-472
Cow position: chrX:47379746-47379437 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 39

Conread position: 171-491
Cow position: chrX:42994335-42994663 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 171-543
Cow position: chrX:13912800-13913180 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 37

Conread position: 171-576
Cow position: chrX:13868418-13868841 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 33

Conread position: 171-586
Cow position: chrX:13648063-13647637 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 288
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 133, 45

Conread position: 171-586
Cow position: chrX:38007047-38006623 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 56

Conread position: 171-587
Cow position: chrX:32171161-32170740 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 56

Conread position: 171-590
Cow position: chrX:12437515-12437120 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 86, 33

Conread position: 171-590
Cow position: chrX:23564076-23563639 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 171-606
Cow position: chrX:10831791-10831319 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 411

Conread position: 171-711
Cow position: chrX:40481152-40480598 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 50

Conread position: 172-590
Cow position: chrX:11655801-11656233 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 284

Conread position: 174-494
Cow position: chrX:30162721-30163053 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 35

Conread position: 174-539
Cow position: chrX:2467604-2467985 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 63, 41

Conread position: 174-543
Cow position: chrX:27680123-27680503 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 174-666
Cow position: chrX:37489442-37489935 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 222

Conread position: 174-671
Cow position: chrX:40557952-40557442 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 175-464
Cow position: chrX:20582755-20583044 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 45

Conread position: 175-491
Cow position: chrX:8899749-8900077 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 134, 52

Conread position: 175-509
Cow position: chrX:25232311-25232660 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 88, 27

Conread position: 175-570
Cow position: chrX:39546248-39545850 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 263
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 143, 45

Conread position: 175-578
Cow position: chrX:7496970-7497379 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 279
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 35

Conread position: 175-590
Cow position: chrX:31729183-31729594 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 40

Conread position: 176-493
Cow position: chrX:37416349-37416019 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 220
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 33

Conread position: 176-721
Cow position: chrX:5872042-5872592 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 25

Conread position: 177-306
Cow position: chrX:22115555-22115429 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 177-368
Cow position: chrX:10916481-10916671 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 46

Conread position: 177-397
Cow position: chrX:4123562-4123790 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 81, 39

Conread position: 177-426
Cow position: chrX:33020213-33020467 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 77, 33

Conread position: 177-434
Cow position: chrX:35388180-35387911 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 39

Conread position: 177-445
Cow position: chrX:35609713-35609991 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 39

Conread position: 177-446
Cow position: chrX:11674785-11675066 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 81, 37

Conread position: 177-468
Cow position: chrX:34990768-34991062 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 138, 51

Conread position: 177-469
Cow position: chrX:28097852-28098142 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 75, 33

Conread position: 177-471
Cow position: chrX:14924727-14925029 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 43

Conread position: 177-472
Cow position: chrX:12115768-12116077 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 43

Conread position: 177-472
Cow position: chrX:32128267-32127962 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 158

Conread position: 177-473
Cow position: chrX:38439200-38439512 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 83, 50

Conread position: 177-477
Cow position: chrX:18999625-18999922 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 33

Conread position: 177-491
Cow position: chrX:40452486-40452168 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 50

Conread position: 177-493
Cow position: chrX:42462021-42461692 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 60, 40

Conread position: 177-493
Cow position: chrX:42585341-42585028 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 19

Conread position: 177-493
Cow position: chrX:48247108-48246795 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 230, 31

Conread position: 177-494
Cow position: chrX:28105649-28105971 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 141, 41

Conread position: 177-501
Cow position: chrX:35041949-35042278 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 23

Conread position: 177-501
Cow position: chrX:35409395-35409714 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 75, 33

Conread position: 177-505
Cow position: chrX:19188663-19188995 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 141, 44

Conread position: 177-505
Cow position: chrX:45412925-45412599 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 22

Conread position: 177-522
Cow position: chrX:42507917-42507564 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 128, 27

Conread position: 177-526
Cow position: chrX:20029974-20030342 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 237
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 54

Conread position: 177-529
Cow position: chrX:26441053-26440694 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 33

Conread position: 177-534
Cow position: chrX:37843447-37843813 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 77, 33

Conread position: 177-538
Cow position: chrX:21064013-21064383 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 43

Conread position: 177-538
Cow position: chrX:47344021-47344396 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 141, 50

Conread position: 177-543
Cow position: chrX:31949204-31948830 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 177-551
Cow position: chrX:7508853-7509252 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 270
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 121

Conread position: 177-551
Cow position: chrX:47967327-47967720 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 33

Conread position: 177-552
Cow position: chrX:38936426-38936814 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 77, 31

Conread position: 177-566
Cow position: chrX:35224029-35224424 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 38

Conread position: 177-569
Cow position: chrX:35273071-35273495 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 277
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 32, 50

Conread position: 177-569
Cow position: chrX:35413357-35413741 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 33

Conread position: 177-569
Cow position: chrX:42470210-42469810 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 51

Conread position: 177-570
Cow position: chrX:4996338-4996719 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 265
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 138, 50

Conread position: 177-572
Cow position: chrX:25337904-25338321 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 291
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 31

Conread position: 177-574
Cow position: chrX:917643-917232 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 33

Conread position: 177-576
Cow position: chrX:30543555-30543146 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 292
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 131, 33

Conread position: 177-578
Cow position: chrX:126518-126907 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 283
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 44

Conread position: 177-578
Cow position: chrX:20801505-20801909 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 275
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 117, 34

Conread position: 177-578
Cow position: chrX:25035659-25035242 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 18

Conread position: 177-578
Cow position: chrX:32309828-32310246 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 274
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 32, 46

Conread position: 177-578
Cow position: chrX:36840594-36841003 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 268
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 44

Conread position: 177-579
Cow position: chrX:2300658-2301065 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 268
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 140, 59

Conread position: 177-580
Cow position: chrX:46771245-46770821 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 74, 33

Conread position: 177-581
Cow position: chrX:38218445-38218859 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 34

Conread position: 177-587
Cow position: chrX:11844511-11844092 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 27

Conread position: 177-588
Cow position: chrX:4633124-4632705 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 9

Conread position: 177-589
Cow position: chrX:23583285-23583712 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 127, 44

Conread position: 177-589
Cow position: chrX:43114900-43115301 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 280
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 211, 48

Conread position: 177-590
Cow position: chrX:8730806-8731245 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 177-590
Cow position: chrX:15545624-15546033 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 39

Conread position: 177-590
Cow position: chrX:16762499-16762925 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 34

Conread position: 177-590
Cow position: chrX:20340164-20339742 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 33

Conread position: 177-590
Cow position: chrX:22812789-22813214 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 32

Conread position: 177-590
Cow position: chrX:26492729-26493158 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 280
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 127, 43

Conread position: 177-590
Cow position: chrX:27705320-27705738 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 42

Conread position: 177-590
Cow position: chrX:31250118-31250540 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 33

Conread position: 177-590
Cow position: chrX:34663132-34662695 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 296
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 84

Conread position: 177-590
Cow position: chrX:37836316-37836730 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 293
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 60, 27

Conread position: 177-590
Cow position: chrX:41790713-41790276 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 301
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 141, 33

Conread position: 177-590
Cow position: chrX:42247449-42247030 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 27

Conread position: 177-590
Cow position: chrX:44192715-44192292 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 297
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 60, 23

Conread position: 177-590
Cow position: chrX:45414573-45414155 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 280
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 141, 50

Conread position: 177-590
Cow position: chrX:46032991-46032575 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 295
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 141, 39

Conread position: 177-591
Cow position: chrX:11614448-11614845 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 32

Conread position: 177-591
Cow position: chrX:42086589-42086980 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 46

Conread position: 177-592
Cow position: chrX:1616324-1615894 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 55

Conread position: 177-592
Cow position: chrX:31443094-31442676 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 177-592
Cow position: chrX:41238636-41238201 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 177-592
Cow position: chrX:43527230-43527662 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 177-592
Cow position: chrX:45430291-45429867 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 289
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 39

Conread position: 177-595
Cow position: chrX:33855514-33855063 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 32, 46

Conread position: 177-605
Cow position: chrX:28134076-28134506 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 27

Conread position: 177-617
Cow position: chrX:27516260-27516696 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 49

Conread position: 177-627
Cow position: chrX:35268617-35269052 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 39

Conread position: 177-650
Cow position: chrX:12249528-12250006 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 356
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 32

Conread position: 177-671
Cow position: chrX:7351029-7351517 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 27

Conread position: 177-671
Cow position: chrX:7695490-7695979 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 26

Conread position: 177-671
Cow position: chrX:18695194-18694706 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 50

Conread position: 177-671
Cow position: chrX:33466344-33466838 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 39

Conread position: 177-672
Cow position: chrX:5017679-5017199 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 33

Conread position: 177-672
Cow position: chrX:40269203-40269725 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 43

Conread position: 177-689
Cow position: chrX:31294813-31294335 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 48

Conread position: 178-479
Cow position: chrX:30833121-30832814 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 21

Conread position: 178-563
Cow position: chrX:28111223-28111634 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 276
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 377

Conread position: 178-571
Cow position: chrX:7277658-7278044 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 24

Conread position: 178-576
Cow position: chrX:11314050-11313649 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 266
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 38

Conread position: 178-578
Cow position: chrX:28787095-28787486 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 266
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 76, 33

Conread position: 179-479
Cow position: chrX:25237907-25238215 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 37

Conread position: 179-586
Cow position: chrX:15329382-15329791 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 270
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 30

Conread position: 179-590
Cow position: chrX:27509292-27508873 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 179-671
Cow position: chrX:31373303-31373766 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 37

Conread position: 181-555
Cow position: chrX:26625954-26625554 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 221

Conread position: 182-467
Cow position: chrX:3653495-3653786 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 70, 28

Conread position: 182-491
Cow position: chrX:34270148-34270452 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 127, 22

Conread position: 182-517
Cow position: chrX:48243720-48243391 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 235
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 67, 26

Conread position: 182-538
Cow position: chrX:34454401-34454757 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 34

Conread position: 182-555
Cow position: chrX:48195309-48194918 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 264
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 117, 45

Conread position: 182-564
Cow position: chrX:8925438-8925824 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 29

Conread position: 182-565
Cow position: chrX:7571638-7572033 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 127, 45

Conread position: 182-568
Cow position: chrX:4269335-4268934 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 80, 10

Conread position: 182-577
Cow position: chrX:41122804-41123198 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 34

Conread position: 182-581
Cow position: chrX:6413778-6414184 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 274
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 111, 39

Conread position: 182-590
Cow position: chrX:31436212-31436626 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 21

Conread position: 182-591
Cow position: chrX:5118750-5118346 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 290
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 206, 20

Conread position: 182-591
Cow position: chrX:7718588-7718985 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 182-701
Cow position: chrX:878636-878108 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 29

Conread position: 183-491
Cow position: chrX:19015175-19015487 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 27

Conread position: 183-514
Cow position: chrX:24105359-24105700 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 135, 44

Conread position: 183-620
Cow position: chrX:17725711-17726163 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 38

Conread position: 183-651
Cow position: chrX:34502656-34503120 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 28

Conread position: 184-367
Cow position: chrX:44908048-44908240 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 184-579
Cow position: chrX:45967896-45968289 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 280
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 32

Conread position: 184-624
Cow position: chrX:15147452-15147012 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 32

Conread position: 185-570
Cow position: chrX:47481533-47481928 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 31

Conread position: 186-423
Cow position: chrX:38967386-38967628 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 41

Conread position: 189-508
Cow position: chrX:41743644-41743984 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 15

Conread position: 189-568
Cow position: chrX:19689957-19690345 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 19

Conread position: 190-589
Cow position: chrX:14973992-14973595 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 38

Conread position: 190-591
Cow position: chrX:17794717-17795134 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 286
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 12, 23

Conread position: 191-594
Cow position: chrX:20151591-20152012 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 36

Conread position: 193-555
Cow position: chrX:48652988-48652604 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 58, 28

Conread position: 195-501
Cow position: chrX:41198842-41199166 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 54, 304

Conread position: 196-590
Cow position: chrX:25816150-25815750 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 200-591
Cow position: chrX:22074544-22074953 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 203-366
Cow position: chrX:29049715-29049884 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 72

Conread position: 203-650
Cow position: chrX:9416943-9416466 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 8

Conread position: 204-504
Cow position: chrX:39938773-39938460 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 7

Conread position: 204-578
Cow position: chrX:40788956-40789343 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 33, 7

Conread position: 205-589
Cow position: chrX:46073070-46072668 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 206-449
Cow position: chrX:877276-877027 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 138

Conread position: 207-583
Cow position: chrX:29120812-29121192 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 18

Conread position: 209-423
Cow position: chrX:25411591-25411821 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 144

Conread position: 209-591
Cow position: chrX:15814849-15815236 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 100

Conread position: 209-730
Cow position: chrX:34441700-34441162 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 69

Conread position: 210-399
Cow position: chrX:6639878-6640084 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 11

Conread position: 210-473
Cow position: chrX:2383241-2383516 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 12, 241

Conread position: 210-479
Cow position: chrX:47757175-47756892 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 12

Conread position: 210-585
Cow position: chrX:42011034-42011428 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 11

Conread position: 211-585
Cow position: chrX:30421185-30420805 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 274
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 214

Conread position: 212-576
Cow position: chrX:47054772-47054387 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 19

Conread position: 212-668
Cow position: chrX:27772200-27771725 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 7

Conread position: 214-570
Cow position: chrX:7161830-7162188 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 214-591
Cow position: chrX:34411601-34411999 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 142

Conread position: 216-472
Cow position: chrX:9997573-9997304 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 38, 7

Conread position: 216-636
Cow position: chrX:11561913-11562341 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 279
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 250

Conread position: 220-445
Cow position: chrX:10437905-10437666 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 156

Conread position: 220-472
Cow position: chrX:44053021-44053290 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 220-505
Cow position: chrX:1810398-1810096 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 74

Conread position: 220-505
Cow position: chrX:26876118-26875817 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 29, 48

Conread position: 220-505
Cow position: chrX:40116188-40116484 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 194

Conread position: 220-538
Cow position: chrX:32020359-32020034 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 226

Conread position: 220-566
Cow position: chrX:11939161-11938805 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 42, 188

Conread position: 220-570
Cow position: chrX:27432156-27431786 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 228

Conread position: 220-578
Cow position: chrX:17631039-17630661 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 260
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 34, 162

Conread position: 220-578
Cow position: chrX:45113391-45113761 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 101

Conread position: 220-581
Cow position: chrX:45598841-45598462 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 246

Conread position: 220-585
Cow position: chrX:4768513-4768879 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 145

Conread position: 220-587
Cow position: chrX:42492747-42492375 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 28

Conread position: 220-590
Cow position: chrX:21672314-21672713 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 235

Conread position: 220-591
Cow position: chrX:28866229-28865852 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 121

Conread position: 220-591
Cow position: chrX:28878399-28878021 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 115

Conread position: 220-591
Cow position: chrX:41673865-41674258 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 231

Conread position: 220-595
Cow position: chrX:7721748-7722148 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 220-604
Cow position: chrX:43567702-43568087 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 100

Conread position: 220-674
Cow position: chrX:6690485-6690023 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 126

Conread position: 221-391
Cow position: chrX:4942983-4942810 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 165

Conread position: 221-397
Cow position: chrX:2206780-2206598 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 118

Conread position: 221-497
Cow position: chrX:9855066-9855354 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 175

Conread position: 221-497
Cow position: chrX:9953905-9954195 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 177

Conread position: 221-498
Cow position: chrX:23970153-23970436 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 33, 168

Conread position: 221-525
Cow position: chrX:20709836-20710161 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 11

Conread position: 221-558
Cow position: chrX:21004448-21004805 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 221-558
Cow position: chrX:43049110-43049451 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 9

Conread position: 221-562
Cow position: chrX:40692974-40692627 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 73

Conread position: 221-570
Cow position: chrX:39558582-39558217 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 324

Conread position: 221-571
Cow position: chrX:42499265-42498914 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 37, 172

Conread position: 221-573
Cow position: chrX:47249022-47248643 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 131

Conread position: 221-575
Cow position: chrX:44961511-44961888 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 221-578
Cow position: chrX:33493539-33493916 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 160

Conread position: 221-579
Cow position: chrX:29032183-29032549 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 11

Conread position: 221-590
Cow position: chrX:16416274-16416652 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 42

Conread position: 221-590
Cow position: chrX:34543551-34543936 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 196

Conread position: 221-590
Cow position: chrX:41884654-41884260 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 275

Conread position: 221-591
Cow position: chrX:38549212-38549600 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 125

Conread position: 221-591
Cow position: chrX:41526757-41526376 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 37, 221

Conread position: 221-615
Cow position: chrX:619244-618830 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 329

Conread position: 221-619
Cow position: chrX:11455288-11454871 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 315

Conread position: 221-650
Cow position: chrX:23514254-23513816 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 53

Conread position: 221-671
Cow position: chrX:7513278-7513725 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 312
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 194

Conread position: 222-581
Cow position: chrX:32623348-32623713 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 99

Conread position: 223-591
Cow position: chrX:38642026-38642401 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 31, 166

Conread position: 224-590
Cow position: chrX:17231501-17231888 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 224-592
Cow position: chrX:9201314-9201703 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 249

Conread position: 225-455
Cow position: chrX:42339168-42338936 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 135

Conread position: 225-467
Cow position: chrX:23497895-23497642 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 225-477
Cow position: chrX:20752031-20752288 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 84, 251

Conread position: 225-577
Cow position: chrX:37119367-37119731 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 103

Conread position: 225-585
Cow position: chrX:19930424-19930790 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 30, 145

Conread position: 225-589
Cow position: chrX:44054569-44054953 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 240

Conread position: 225-590
Cow position: chrX:20697840-20697459 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 197

Conread position: 225-590
Cow position: chrX:30963104-30962724 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 223

Conread position: 225-591
Cow position: chrX:45501916-45502299 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 168

Conread position: 225-601
Cow position: chrX:35288428-35288817 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 26, 129

Conread position: 225-649
Cow position: chrX:13382092-13382532 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 293

Conread position: 225-667
Cow position: chrX:27394246-27393806 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 141

Conread position: 226-505
Cow position: chrX:14900952-14900669 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 25, 144

Conread position: 226-577
Cow position: chrX:32431396-32431763 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 232
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 53

Conread position: 226-618
Cow position: chrX:42171530-42171114 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 330

Conread position: 231-558
Cow position: chrX:11856203-11856550 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 39

Conread position: 231-578
Cow position: chrX:4865025-4865370 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 157

Conread position: 231-578
Cow position: chrX:17662823-17662458 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 235

Conread position: 231-578
Cow position: chrX:34565071-34565423 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 24

Conread position: 231-589
Cow position: chrX:42381326-42380961 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 111

Conread position: 231-590
Cow position: chrX:20887870-20887488 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 23, 66

Conread position: 231-591
Cow position: chrX:35542665-35543040 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 263

Conread position: 232-501
Cow position: chrX:4750523-4750241 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 54

Conread position: 233-517
Cow position: chrX:11589816-11589509 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 242-497
Cow position: chrX:8070915-8070643 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 211

Conread position: 242-633
Cow position: chrX:39126123-39126517 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 119

Conread position: 243-590
Cow position: chrX:45110440-45110808 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 117

Conread position: 245-446
Cow position: chrX:46315589-46315374 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 245-588
Cow position: chrX:32420010-32420360 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 194

Conread position: 245-589
Cow position: chrX:1499461-1499816 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 347

Conread position: 246-477
Cow position: chrX:28836108-28835866 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 19

Conread position: 246-522
Cow position: chrX:47159719-47159436 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 188
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 67

Conread position: 246-590
Cow position: chrX:36283138-36283491 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 200

Conread position: 246-729
Cow position: chrX:22821839-22822329 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 345
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 126

Conread position: 248-396
Cow position: chrX:16324169-16324013 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 248-427
Cow position: chrX:48684428-48684240 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 248-443
Cow position: chrX:19019316-19019105 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 248-453
Cow position: chrX:13265825-13265611 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 248-474
Cow position: chrX:45015381-45015608 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 60

Conread position: 248-477
Cow position: chrX:26285774-26286015 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 137

Conread position: 248-491
Cow position: chrX:15139749-15139497 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 13

Conread position: 248-492
Cow position: chrX:40567394-40567646 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 151

Conread position: 248-493
Cow position: chrX:16790043-16789806 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 95

Conread position: 248-501
Cow position: chrX:41167170-41166902 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 70, 0

Conread position: 248-525
Cow position: chrX:29542424-29542130 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 248-540
Cow position: chrX:841953-842259 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 80

Conread position: 248-550
Cow position: chrX:41560444-41560154 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 129

Conread position: 248-569
Cow position: chrX:1514606-1514288 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 152

Conread position: 248-577
Cow position: chrX:11633473-11633821 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 0

Conread position: 248-578
Cow position: chrX:17042485-17042822 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 217

Conread position: 248-580
Cow position: chrX:3579739-3580086 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 70, 326

Conread position: 248-581
Cow position: chrX:45845890-45846244 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 250

Conread position: 248-585
Cow position: chrX:1503133-1503474 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 70, 249

Conread position: 248-585
Cow position: chrX:6278711-6278351 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 248-586
Cow position: chrX:5900252-5900610 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 221

Conread position: 248-587
Cow position: chrX:32329955-32330319 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 70, 29

Conread position: 248-587
Cow position: chrX:46587612-46587971 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 248-589
Cow position: chrX:4826033-4825686 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 61, 113

Conread position: 248-589
Cow position: chrX:44396809-44397161 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 126

Conread position: 248-590
Cow position: chrX:9425947-9425600 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 90

Conread position: 248-591
Cow position: chrX:9635386-9635039 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 128

Conread position: 248-591
Cow position: chrX:29602036-29601675 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 248-622
Cow position: chrX:6265791-6265416 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 64

Conread position: 248-625
Cow position: chrX:11073394-11073004 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 106

Conread position: 248-626
Cow position: chrX:6488381-6488759 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 61

Conread position: 248-671
Cow position: chrX:38852991-38853427 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 302
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 349

Conread position: 249-587
Cow position: chrX:36355919-36356254 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 10

Conread position: 250-588
Cow position: chrX:13177668-13177326 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 136

Conread position: 250-590
Cow position: chrX:27174792-27175150 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 270

Conread position: 251-451
Cow position: chrX:35284421-35284628 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 251-472
Cow position: chrX:17908486-17908258 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 58, 162

Conread position: 251-569
Cow position: chrX:37574654-37574971 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 148

Conread position: 251-585
Cow position: chrX:28013642-28013297 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 226
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 83

Conread position: 251-591
Cow position: chrX:1176185-1175837 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 58, 286

Conread position: 251-591
Cow position: chrX:17888608-17888270 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 41

Conread position: 251-594
Cow position: chrX:23091679-23092029 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 120

Conread position: 251-624
Cow position: chrX:37910250-37910625 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 157

Conread position: 251-674
Cow position: chrX:38071973-38071534 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 262
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 185

Conread position: 252-587
Cow position: chrX:36975748-36976100 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 252-590
Cow position: chrX:40035646-40035288 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 89

Conread position: 252-591
Cow position: chrX:12980032-12979681 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 159

Conread position: 253-595
Cow position: chrX:43780053-43779694 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 311

Conread position: 254-472
Cow position: chrX:4091448-4091670 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 186

Conread position: 254-479
Cow position: chrX:29509643-29509400 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 214

Conread position: 255-511
Cow position: chrX:6234647-6234376 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 0

Conread position: 255-526
Cow position: chrX:12405575-12405293 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 103, 39

Conread position: 255-590
Cow position: chrX:29545078-29544725 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 194

Conread position: 256-511
Cow position: chrX:36961438-36961707 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 44, 198

Conread position: 256-540
Cow position: chrX:40809489-40809795 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 256-593
Cow position: chrX:33000706-33001062 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 98

Conread position: 260-490
Cow position: chrX:18195748-18195971 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 57

Conread position: 261-477
Cow position: chrX:45874806-45875032 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 224

Conread position: 261-569
Cow position: chrX:38066631-38066324 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 34

Conread position: 261-588
Cow position: chrX:8869601-8869251 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 114

Conread position: 262-620
Cow position: chrX:43730406-43730043 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 140

Conread position: 263-587
Cow position: chrX:44657155-44656808 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 55, 223

Conread position: 263-590
Cow position: chrX:3489075-3488739 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 219

Conread position: 263-621
Cow position: chrX:23785463-23785826 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 152

Conread position: 263-667
Cow position: chrX:31311835-31312263 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 353

Conread position: 264-590
Cow position: chrX:31252228-31252559 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 222

Conread position: 265-587
Cow position: chrX:42235722-42235376 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 335

Conread position: 270-591
Cow position: chrX:35383203-35382884 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 126

Conread position: 270-620
Cow position: chrX:36067836-36068200 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 80

Conread position: 271-676
Cow position: chrX:32820847-32821261 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 276-566
Cow position: chrX:47186498-47186199 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 42, 170

Conread position: 278-590
Cow position: chrX:27145447-27145756 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 118

Conread position: 278-591
Cow position: chrX:169701-169393 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 78, 40

Conread position: 280-590
Cow position: chrX:35885903-35885575 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 153

Conread position: 280-607
Cow position: chrX:22387421-22387081 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 182

Conread position: 281-590
Cow position: chrX:6407376-6407695 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 126

Conread position: 290-583
Cow position: chrX:41068564-41068870 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 49

Conread position: 291-517
Cow position: chrX:19003147-19003372 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 97, 12

Conread position: 291-590
Cow position: chrX:45875239-45875543 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 26

Conread position: 298-591
Cow position: chrX:34792457-34792160 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 36

Conread position: 299-580
Cow position: chrX:41870928-41871209 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 17

Conread position: 302-620
Cow position: chrX:9365816-9365493 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 15

Conread position: 303-472
Cow position: chrX:10278669-10278841 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 27

Conread position: 303-533
Cow position: chrX:45993078-45993325 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 303-575
Cow position: chrX:20584177-20584465 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 303-588
Cow position: chrX:14275878-14275593 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 29

Conread position: 303-630
Cow position: chrX:39415511-39415179 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 10, 136

Conread position: 303-640
Cow position: chrX:29680401-29680057 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 303-650
Cow position: chrX:11085198-11084848 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 17

Conread position: 304-589
Cow position: chrX:34313889-34314175 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 43

Conread position: 304-590
Cow position: chrX:38728595-38728886 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 159

Conread position: 319-590
Cow position: chrX:34505174-34504898 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 110, 66

Conread position: 320-542
Cow position: chrX:27685121-27685353 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 320-572
Cow position: chrX:19273849-19273573 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 320-578
Cow position: chrX:5919370-5919637 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 65

Conread position: 320-578
Cow position: chrX:37986107-37986365 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 68, 78

Conread position: 320-581
Cow position: chrX:4399003-4399262 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 63

Conread position: 320-589
Cow position: chrX:45976794-45977077 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 268

Conread position: 320-590
Cow position: chrX:18204589-18204311 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 114

Conread position: 320-590
Cow position: chrX:41027031-41027311 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 40

Conread position: 320-671
Cow position: chrX:616388-616023 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 292

Conread position: 321-555
Cow position: chrX:45005505-45005741 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 57

Conread position: 321-591
Cow position: chrX:21986417-21986139 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 67, 160

Conread position: 321-591
Cow position: chrX:42873267-42873538 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 31, 87

Conread position: 322-477
Cow position: chrX:35969210-35969050 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 8

Conread position: 322-590
Cow position: chrX:27946183-27945902 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 161

Conread position: 322-591
Cow position: chrX:40685455-40685175 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 324-543
Cow position: chrX:40320283-40320511 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 96

Conread position: 326-540
Cow position: chrX:27119579-27119801 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 114

Conread position: 326-592
Cow position: chrX:26881688-26881410 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 328-578
Cow position: chrX:5680053-5679791 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 165

Conread position: 328-578
Cow position: chrX:34315407-34315661 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 60, 34

Conread position: 328-591
Cow position: chrX:6260276-6259997 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 269

Conread position: 328-591
Cow position: chrX:19469616-19469355 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 20

Conread position: 328-644
Cow position: chrX:5679684-5679370 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 92

Conread position: 330-590
Cow position: chrX:24331662-24331928 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 122

Conread position: 338-522
Cow position: chrX:47657276-47657470 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 338-537
Cow position: chrX:17949598-17949394 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 23, 132

Conread position: 338-578
Cow position: chrX:29194126-29194370 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 50, 57

Conread position: 338-590
Cow position: chrX:42927927-42927672 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 95

Conread position: 338-591
Cow position: chrX:9651133-9650871 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 338-612
Cow position: chrX:38654538-38654270 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 37

Conread position: 344-623
Cow position: chrX:23562532-23562819 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 347-576
Cow position: chrX:48044613-48044378 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 212

Conread position: 347-590
Cow position: chrX:10516157-10516405 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 88, 37

Conread position: 347-590
Cow position: chrX:21327804-21328065 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 347-671
Cow position: chrX:16348669-16348338 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 157

Conread position: 348-590
Cow position: chrX:40283027-40283274 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 158

Conread position: 349-505
Cow position: chrX:20790824-20790977 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 90

Conread position: 350-578
Cow position: chrX:34837150-34836924 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 34

Conread position: 350-590
Cow position: chrX:12095870-12095620 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 350-591
Cow position: chrX:29549644-29549399 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 162

Conread position: 352-589
Cow position: chrX:20168464-20168708 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 215

Conread position: 354-590
Cow position: chrX:33654933-33654692 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 45

Conread position: 354-700
Cow position: chrX:37129177-37129537 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 30

Conread position: 355-590
Cow position: chrX:29050156-29050400 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 355-590
Cow position: chrX:46433400-46433642 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 33, 227

Conread position: 355-591
Cow position: chrX:27261097-27261345 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 355-701
Cow position: chrX:25283105-25282771 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 118

Conread position: 356-591
Cow position: chrX:22115409-22115165 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 229

Conread position: 356-595
Cow position: chrX:41192619-41192862 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 7

Conread position: 356-603
Cow position: chrX:7710628-7710375 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 246

Conread position: 356-607
Cow position: chrX:42855365-42855626 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 246

Conread position: 356-643
Cow position: chrX:45099035-45099336 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 271

Conread position: 357-579
Cow position: chrX:33205053-33204828 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 66

Conread position: 362-565
Cow position: chrX:20882021-20881818 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 142

Conread position: 362-581
Cow position: chrX:23940112-23939906 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 42

Conread position: 362-588
Cow position: chrX:23113194-23113434 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 26, 236

Conread position: 362-589
Cow position: chrX:40680527-40680765 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 0

Conread position: 363-577
Cow position: chrX:36514977-36514753 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 363-590
Cow position: chrX:16575040-16575264 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 69

Conread position: 365-612
Cow position: chrX:6463528-6463771 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 58

Conread position: 366-649
Cow position: chrX:39220000-39220276 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 22, 111

Conread position: 367-671
Cow position: chrX:41271077-41270751 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 253

Conread position: 368-592
Cow position: chrX:4153113-4152877 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 201

Conread position: 372-585
Cow position: chrX:38208617-38208398 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 56

Conread position: 375-589
Cow position: chrX:22915107-22914891 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 12, 34

Conread position: 375-591
Cow position: chrX:27511357-27511581 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 377-650
Cow position: chrX:19097291-19097003 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 74

Conread position: 378-620
Cow position: chrX:32978143-32977903 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 23, 11

Conread position: 380-671
Cow position: chrX:15820531-15820819 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 8, 72

Conread position: 384-588
Cow position: chrX:25036926-25037137 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 384-589
Cow position: chrX:4109129-4109335 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 74

Conread position: 384-590
Cow position: chrX:44703133-44702914 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 72

Conread position: 384-650
Cow position: chrX:23561800-23562064 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 64

Conread position: 385-588
Cow position: chrX:40108576-40108368 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 38

Conread position: 388-655
Cow position: chrX:31627038-31626762 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 127

Conread position: 389-591
Cow position: chrX:1088198-1087990 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 16

Conread position: 390-578
Cow position: chrX:46429875-46429679 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 390-590
Cow position: chrX:44339379-44339173 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 120

Conread position: 397-579
Cow position: chrX:10305398-10305210 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 11, 113

Conread position: 399-588
Cow position: chrX:23088820-23089002 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 51

Conread position: 400-580
Cow position: chrX:29115668-29115848 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 75, 47

Conread position: 400-590
Cow position: chrX:4645955-4645763 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 73, 152

Conread position: 403-575
Cow position: chrX:17956655-17956827 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 33

Conread position: 406-588
Cow position: chrX:23188814-23188634 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 69, 41

Conread position: 406-671
Cow position: chrX:40532081-40531810 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 192

Conread position: 407-577
Cow position: chrX:19943273-19943097 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 407-583
Cow position: chrX:39352744-39352930 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 407-584
Cow position: chrX:29553249-29553431 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 11

Conread position: 407-590
Cow position: chrX:42893881-42894079 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 407-590
Cow position: chrX:48558711-48558898 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 407-591
Cow position: chrX:18964861-18964675 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 96

Conread position: 408-588
Cow position: chrX:43150385-43150580 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 167

Conread position: 411-588
Cow position: chrX:41941594-41941773 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 24

Conread position: 412-590
Cow position: chrX:30840508-30840698 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 412-671
Cow position: chrX:23498709-23498447 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 213

Conread position: 416-620
Cow position: chrX:20743575-20743784 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 177

Conread position: 422-580
Cow position: chrX:17966322-17966483 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 26

Conread position: 422-672
Cow position: chrX:25411886-25412136 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 142

Conread position: 425-627
Cow position: chrX:28923025-28923218 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 169, 50

Conread position: 430-586
Cow position: chrX:20678152-20677994 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 49

Conread position: 430-590
Cow position: chrX:16984632-16984792 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 20

Conread position: 430-591
Cow position: chrX:3806670-3806834 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 154

Conread position: 431-653
Cow position: chrX:29733603-29733388 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 147

Conread position: 433-588
Cow position: chrX:32910096-32910249 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 16

Conread position: 433-591
Cow position: chrX:38587852-38587690 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 435-586
Cow position: chrX:11763008-11762854 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 40, 143

Conread position: 435-591
Cow position: chrX:35658793-35658949 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 39, 22

Conread position: 435-620
Cow position: chrX:6223135-6222942 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 436-590
Cow position: chrX:26205454-26205297 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 116

Conread position: 437-564
Cow position: chrX:35278324-35278455 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 438-577
Cow position: chrX:24054667-24054816 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 438-591
Cow position: chrX:11653760-11653923 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 438-591
Cow position: chrX:42506231-42506080 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 34

Conread position: 439-577
Cow position: chrX:27075054-27074912 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 439-581
Cow position: chrX:38722118-38722265 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 439-590
Cow position: chrX:23335975-23335824 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 66

Conread position: 439-590
Cow position: chrX:35275983-35276137 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 439-591
Cow position: chrX:21665244-21665087 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 439-591
Cow position: chrX:29478721-29478876 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 78

Conread position: 439-591
Cow position: chrX:42160624-42160776 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 19

Conread position: 439-592
Cow position: chrX:42331275-42331437 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 146

Conread position: 439-648
Cow position: chrX:18046398-18046605 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 65

Conread position: 440-649
Cow position: chrX:31829463-31829252 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 145

Conread position: 441-590
Cow position: chrX:34420733-34420886 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 442-578
Cow position: chrX:25788905-25788764 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 443-582
Cow position: chrX:31745004-31744860 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 443-598
Cow position: chrX:42282578-42282736 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 32

Conread position: 444-614
Cow position: chrX:38967890-38968057 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 77

Conread position: 445-590
Cow position: chrX:4328180-4328032 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 117

Conread position: 445-590
Cow position: chrX:39180230-39180082 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 107

Conread position: 446-588
Cow position: chrX:1337275-1337142 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 446-591
Cow position: chrX:4559743-4559886 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 29, 43

Conread position: 447-590
Cow position: chrX:19761759-19761906 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 447-590
Cow position: chrX:42450009-42449862 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 447-591
Cow position: chrX:1122538-1122394 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 28, 57

Conread position: 447-714
Cow position: chrX:24170724-24170470 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 92

Conread position: 448-566
Cow position: chrX:37665697-37665819 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 448-591
Cow position: chrX:38301815-38301962 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 448-607
Cow position: chrX:19018825-19018663 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 157

Conread position: 450-576
Cow position: chrX:16324006-16323880 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 55

Conread position: 450-590
Cow position: chrX:35285181-35285325 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 450-633
Cow position: chrX:25459726-25459535 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 161

Conread position: 452-590
Cow position: chrX:27668948-27668806 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 452-668
Cow position: chrX:27667443-27667653 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 50, 28

Conread position: 454-591
Cow position: chrX:23098192-23098057 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 82

Conread position: 455-591
Cow position: chrX:47342129-47342268 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 42

Conread position: 455-651
Cow position: chrX:753165-753363 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 145

Conread position: 456-651
Cow position: chrX:23266429-23266627 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 146

Conread position: 461-589
Cow position: chrX:32877356-32877225 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 123

Conread position: 461-619
Cow position: chrX:10075992-10076155 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 13

Conread position: 464-579
Cow position: chrX:40355057-40355172 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 40

Conread position: 464-650
Cow position: chrX:27296506-27296306 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 51

Conread position: 466-668
Cow position: chrX:37062561-37062354 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 136

Conread position: 474-591
Cow position: chrX:2314586-2314466 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 87

Conread position: 474-604
Cow position: chrX:29563049-29562921 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 474-671
Cow position: chrX:4612849-4612658 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 88

Conread position: 475-671
Cow position: chrX:23574689-23574904 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 481-650
Cow position: chrX:41991092-41990932 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 113

Conread position: 482-650
Cow position: chrX:40452043-40451877 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 80

Conread position: 482-784
Cow position: chrX:40648934-40649243 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 120

Conread position: 484-591
Cow position: chrX:23359068-23358961 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 486-620
Cow position: chrX:16481521-16481389 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 490-650
Cow position: chrX:4592449-4592295 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 492-671
Cow position: chrX:12255267-12255089 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 102

Conread position: 500-668
Cow position: chrX:23182921-23182754 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 64, 93

Conread position: 501-627
Cow position: chrX:7107565-7107686 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 501-650
Cow position: chrX:36039462-36039606 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 501-652
Cow position: chrX:26692274-26692413 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 501-661
Cow position: chrX:23187530-23187367 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 501-671
Cow position: chrX:41939886-41940065 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 511-667
Cow position: chrX:42164467-42164619 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 517-748
Cow position: chrX:42482756-42482525 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 75

Conread position: 519-650
Cow position: chrX:47364921-47365047 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 531-671
Cow position: chrX:27689181-27689327 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 540-671
Cow position: chrX:42883329-42883459 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 21

Show alignments to all cow chromosomes.