Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8040N05.3
        

               Conread position:
               1-122
               

               Cow position:
               chr21:5455023-5454901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-130
               

               Cow position:
               chr21:22720193-22720326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               1-137
               

               Cow position:
               chr21:36756565-36756706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               1-143
               

               Cow position:
               chr21:17175117-17175255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 45
               

               Conread position:
               1-144
               

               Cow position:
               chr21:46463487-46463632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               1-147
               

               Cow position:
               chr21:33360067-33359925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 102
               

               Conread position:
               1-149
               

               Cow position:
               chr21:37014436-37014288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               1-154
               

               Cow position:
               chr21:5636752-5636597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               114, 59
               

               Conread position:
               1-157
               

               Cow position:
               chr21:38664603-38664765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               1-161
               

               Cow position:
               chr21:18289629-18289793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-166
               

               Cow position:
               chr21:13840291-13840461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 157
               

               Conread position:
               1-168
               

               Cow position:
               chr21:17929872-17929700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr21:9036265-9036440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr21:30231725-30231555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               1-170
               

               Cow position:
               chr21:41617774-41617602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 137
               

               Conread position:
               1-171
               

               Cow position:
               chr21:44515230-44515404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 13
               

               Conread position:
               1-172
               

               Cow position:
               chr21:4281905-4281734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               1-175
               

               Cow position:
               chr21:10514770-10514951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-178
               

               Cow position:
               chr21:11250845-11251016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr21:43357292-43357108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               68, 44
               

               Conread position:
               1-180
               

               Cow position:
               chr21:34391009-34390826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-180
               

               Cow position:
               chr21:40432416-40432594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               132, 39
               

               Conread position:
               1-181
               

               Cow position:
               chr21:977179-976998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               1-181
               

               Cow position:
               chr21:16187842-16187657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 33
               

               Conread position:
               1-182
               

               Cow position:
               chr21:20152920-20153107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr21:45330635-45330456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 126
               

               Conread position:
               1-183
               

               Cow position:
               chr21:25382980-25383178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr21:6997906-6998100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-185
               

               Cow position:
               chr21:29014947-29014757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-185
               

               Cow position:
               chr21:41878437-41878623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               60, 155
               

               Conread position:
               1-186
               

               Cow position:
               chr21:9698117-9697925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr21:10858785-10858962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr21:13048229-13048038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr21:19060121-19059938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr21:33997261-33997072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               63, 33
               

               Conread position:
               1-195
               

               Cow position:
               chr21:10114367-10114170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               65, 130
               

               Conread position:
               1-195
               

               Cow position:
               chr21:41140751-41140554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-196
               

               Cow position:
               chr21:7394348-7394540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               60, 129
               

               Conread position:
               1-196
               

               Cow position:
               chr21:33791400-33791217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-196
               

               Cow position:
               chr21:40589519-40589317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-196
               

               Cow position:
               chr21:41597787-41597976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               130, 60
               

               Conread position:
               1-196
               

               Cow position:
               chr21:46973167-46972985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               128, 75
               

               Conread position:
               1-197
               

               Cow position:
               chr21:1511257-1511455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               50, 130
               

               Conread position:
               1-197
               

               Cow position:
               chr21:27146023-27145827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               125, 165
               

               Conread position:
               1-197
               

               Cow position:
               chr21:32237261-32237445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr21:10410186-10410389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               63, 145
               

               Conread position:
               1-199
               

               Cow position:
               chr21:12462004-12461798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr21:36910706-36910908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               1-200
               

               Cow position:
               chr21:42209665-42209460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr21:28955474-28955670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               66, 133
               

               Conread position:
               1-202
               

               Cow position:
               chr21:15911366-15911570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               76, 136
               

               Conread position:
               1-202
               

               Cow position:
               chr21:40266090-40266291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 135
               

               Conread position:
               1-205
               

               Cow position:
               chr21:6834016-6834224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               65, 186
               

               Conread position:
               1-205
               

               Cow position:
               chr21:19673771-19673981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr21:1059044-1059251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 97
               

               Conread position:
               1-206
               

               Cow position:
               chr21:3763773-3763569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               134, 160
               

               Conread position:
               1-206
               

               Cow position:
               chr21:5153596-5153797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               133, 39
               

               Conread position:
               1-206
               

               Cow position:
               chr21:5238352-5238569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr21:7377961-7377750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr21:18568676-18568463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr21:20160644-20160852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr21:23980214-23980007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr21:5426907-5427114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               62, 179
               

               Conread position:
               1-207
               

               Cow position:
               chr21:6713559-6713348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               1-207
               

               Cow position:
               chr21:10001041-10001252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr21:10004921-10004709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               71, 146
               

               Conread position:
               1-207
               

               Cow position:
               chr21:13395564-13395775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               128, 29
               

               Conread position:
               1-207
               

               Cow position:
               chr21:15584454-15584242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr21:17183889-17184094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               67, 94
               

               Conread position:
               1-207
               

               Cow position:
               chr21:17193787-17193574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               65, 195
               

               Conread position:
               1-207
               

               Cow position:
               chr21:17875225-17875016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               78, 65
               

               Conread position:
               1-207
               

               Cow position:
               chr21:17982942-17983154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               55, 40
               

               Conread position:
               1-207
               

               Cow position:
               chr21:21077573-21077777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 77
               

               Conread position:
               1-207
               

               Cow position:
               chr21:22718812-22718607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               1-207
               

               Cow position:
               chr21:25344838-25345038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               136, 39
               

               Conread position:
               1-207
               

               Cow position:
               chr21:25628944-25628735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               67, 176
               

               Conread position:
               1-207
               

               Cow position:
               chr21:27341633-27341418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               1-207
               

               Cow position:
               chr21:27521365-27521163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               1-207
               

               Cow position:
               chr21:28919558-28919351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 167
               

               Conread position:
               1-207
               

               Cow position:
               chr21:32339771-32339563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr21:34151550-34151760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               60, 196
               

               Conread position:
               1-207
               

               Cow position:
               chr21:36795566-36795780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr21:38449481-38449273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               76, 135
               

               Conread position:
               1-207
               

               Cow position:
               chr21:40134126-40134334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               130, 188
               

               Conread position:
               1-207
               

               Cow position:
               chr21:45971205-45970997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               63, 135
               

               Conread position:
               1-208
               

               Cow position:
               chr21:15544252-15544051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               66, 101
               

               Conread position:
               1-208
               

               Cow position:
               chr21:44861145-44860941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               1-211
               

               Cow position:
               chr21:868959-868742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               1-211
               

               Cow position:
               chr21:13128130-13127918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               1-211
               

               Cow position:
               chr21:13365304-13365526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 213
               

               Conread position:
               1-212
               

               Cow position:
               chr21:8235588-8235382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               64, 128
               

               Conread position:
               1-212
               

               Cow position:
               chr21:10118525-10118747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 97
               

               Conread position:
               1-212
               

               Cow position:
               chr21:27863549-27863332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               65, 35
               

               Conread position:
               1-212
               

               Cow position:
               chr21:28244435-28244652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               67, 105
               

               Conread position:
               1-213
               

               Cow position:
               chr21:30835329-30835546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               66, 116
               

               Conread position:
               1-218
               

               Cow position:
               chr21:11779563-11779358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               133, 47
               

               Conread position:
               1-218
               

               Cow position:
               chr21:38900744-38900960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               1-219
               

               Cow position:
               chr21:33687-33908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-219
               

               Cow position:
               chr21:641552-641776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-219
               

               Cow position:
               chr21:3585397-3585180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               1-219
               

               Cow position:
               chr21:10263999-10264221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               1-219
               

               Cow position:
               chr21:15445107-15444896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               1-219
               

               Cow position:
               chr21:23322110-23321889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               1-219
               

               Cow position:
               chr21:30607123-30606904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               63, 183
               

               Conread position:
               1-219
               

               Cow position:
               chr21:33580387-33580608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 121
               

               Conread position:
               1-219
               

               Cow position:
               chr21:45329980-45329762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               24, 104
               

               Conread position:
               1-220
               

               Cow position:
               chr21:3818175-3818398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               1-220
               

               Cow position:
               chr21:6051473-6051693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               128, 40
               

               Conread position:
               1-220
               

               Cow position:
               chr21:14760540-14760755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               1-220
               

               Cow position:
               chr21:15976600-15976822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               1-220
               

               Cow position:
               chr21:17511744-17511967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               1-220
               

               Cow position:
               chr21:23586846-23587071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               65, 189
               

               Conread position:
               1-220
               

               Cow position:
               chr21:32559393-32559175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               133, 21
               

               Conread position:
               1-221
               

               Cow position:
               chr21:16152402-16152632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr21:21907463-21907245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               63, 111
               

               Conread position:
               1-223
               

               Cow position:
               chr21:28733948-28733718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               65, 116
               

               Conread position:
               1-224
               

               Cow position:
               chr21:5464713-5464940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               64, 107
               

               Conread position:
               1-224
               

               Cow position:
               chr21:34654042-34654267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               1-225
               

               Cow position:
               chr21:4399769-4400000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 94
               

               Conread position:
               1-226
               

               Cow position:
               chr21:6624126-6624356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 48
               

               Conread position:
               1-226
               

               Cow position:
               chr21:49700068-49699844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               1-228
               

               Cow position:
               chr21:41579722-41579956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-230
               

               Cow position:
               chr21:26648037-26647816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               1-232
               

               Cow position:
               chr21:19513831-19514056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 148
               

               Conread position:
               1-233
               

               Cow position:
               chr21:47363772-47363532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 220
               

               Conread position:
               1-235
               

               Cow position:
               chr21:30236851-30236636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-235
               

               Cow position:
               chr21:34010431-34010193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 96
               

               Conread position:
               1-237
               

               Cow position:
               chr21:18790593-18790359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 98
               

               Conread position:
               1-237
               

               Cow position:
               chr21:39888782-39888532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-237
               

               Cow position:
               chr21:41974409-41974171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               1-237
               

               Cow position:
               chr21:42384476-42384720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-238
               

               Cow position:
               chr21:42007497-42007250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               71, 111
               

               Conread position:
               1-239
               

               Cow position:
               chr21:23672716-23672952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 133
               

               Conread position:
               1-244
               

               Cow position:
               chr21:47764149-47763908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 172
               

               Conread position:
               1-244
               

               Cow position:
               chr21:48527376-48527623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 148
               

               Conread position:
               1-247
               

               Cow position:
               chr21:24642486-24642728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               65, 164
               

               Conread position:
               1-250
               

               Cow position:
               chr21:30256298-30256053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               1-252
               

               Cow position:
               chr21:471643-471889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               1-256
               

               Cow position:
               chr21:26244886-26245145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               1-258
               

               Cow position:
               chr21:7581940-7581678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               50, 243
               

               Conread position:
               1-258
               

               Cow position:
               chr21:27624675-27624926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               1-260
               

               Cow position:
               chr21:16696335-16696600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               1-276
               

               Cow position:
               chr21:33562980-33563254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               1-276
               

               Cow position:
               chr21:39401560-39401837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               67, 103
               

               Conread position:
               1-299
               

               Cow position:
               chr21:10561618-10561309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               66, 60
               

               Conread position:
               1-300
               

               Cow position:
               chr21:3361047-3360743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               1-308
               

               Cow position:
               chr21:10633674-10633364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 136
               

               Conread position:
               1-327
               

               Cow position:
               chr21:734562-734896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 101
               

               Conread position:
               1-366
               

               Cow position:
               chr21:28429409-28429785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               66, 214
               

               Conread position:
               1-371
               

               Cow position:
               chr21:24765256-24765629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               1-389
               

               Cow position:
               chr21:18780005-18779620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               65, 110
               

               Conread position:
               2-130
               

               Cow position:
               chr21:6102292-6102163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 12
               

               Conread position:
               2-161
               

               Cow position:
               chr21:11198181-11198018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               2-163
               

               Cow position:
               chr21:24222571-24222405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               2-163
               

               Cow position:
               chr21:46143925-46144091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               2-173
               

               Cow position:
               chr21:6017586-6017767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2-181
               

               Cow position:
               chr21:2260394-2260216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               2-182
               

               Cow position:
               chr21:1591519-1591705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               2-182
               

               Cow position:
               chr21:20418717-20418531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-185
               

               Cow position:
               chr21:46552138-46551948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 43
               

               Conread position:
               2-195
               

               Cow position:
               chr21:10151762-10151969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               2-196
               

               Cow position:
               chr21:44214091-44214291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 43
               

               Conread position:
               2-206
               

               Cow position:
               chr21:33982839-33982634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               2-207
               

               Cow position:
               chr21:17559962-17559748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 207
               

               Conread position:
               2-207
               

               Cow position:
               chr21:23535682-23535886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               2-207
               

               Cow position:
               chr21:33414118-33413911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               2-207
               

               Cow position:
               chr21:38121068-38121276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               2-213
               

               Cow position:
               chr21:22860966-22861182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 159
               

               Conread position:
               2-219
               

               Cow position:
               chr21:41155830-41156059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               2-220
               

               Cow position:
               chr21:30848981-30848751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               2-220
               

               Cow position:
               chr21:43259190-43259409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               75, 44
               

               Conread position:
               2-236
               

               Cow position:
               chr21:6758314-6758548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               196, 226
               

               Conread position:
               2-244
               

               Cow position:
               chr21:29002191-29001939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               2-250
               

               Cow position:
               chr21:42135653-42135393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               2-256
               

               Cow position:
               chr21:42414133-42413867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 7
               

               Conread position:
               2-301
               

               Cow position:
               chr21:17643013-17642720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               3-153
               

               Cow position:
               chr21:10727245-10727399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               3-173
               

               Cow position:
               chr21:36789759-36789937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-184
               

               Cow position:
               chr21:20260353-20260165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               3-194
               

               Cow position:
               chr21:36696122-36695927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               3-196
               

               Cow position:
               chr21:31253512-31253698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               3-199
               

               Cow position:
               chr21:37706449-37706248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               3-199
               

               Cow position:
               chr21:40168659-40168459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               64, 186
               

               Conread position:
               3-206
               

               Cow position:
               chr21:9416216-9416426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               3-206
               

               Cow position:
               chr21:17890271-17890478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-207
               

               Cow position:
               chr21:29069361-29069151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 190
               

               Conread position:
               3-208
               

               Cow position:
               chr21:17455354-17455563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               52, 109
               

               Conread position:
               3-208
               

               Cow position:
               chr21:19196194-19195987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               3-220
               

               Cow position:
               chr21:45473784-45473567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               3-249
               

               Cow position:
               chr21:2810194-2809942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               60, 135
               

               Conread position:
               3-252
               

               Cow position:
               chr21:47005-47262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               3-267
               

               Cow position:
               chr21:395838-396103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               64, 118
               

               Conread position:
               4-178
               

               Cow position:
               chr21:41107791-41107621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               4-181
               

               Cow position:
               chr21:10090024-10089842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 156
               

               Conread position:
               4-183
               

               Cow position:
               chr21:19766825-19767006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               4-222
               

               Cow position:
               chr21:36909904-36910123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               132, 78
               

               Conread position:
               5-168
               

               Cow position:
               chr21:40899311-40899476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               5-186
               

               Cow position:
               chr21:17008950-17009136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               63, 54
               

               Conread position:
               5-199
               

               Cow position:
               chr21:36763019-36763228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 197
               

               Conread position:
               5-207
               

               Cow position:
               chr21:14452206-14452411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               5-207
               

               Cow position:
               chr21:20165611-20165817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               5-207
               

               Cow position:
               chr21:29978790-29978583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               5-211
               

               Cow position:
               chr21:8206738-8206951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 164
               

               Conread position:
               5-220
               

               Cow position:
               chr21:957642-957860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               64, 181
               

               Conread position:
               5-231
               

               Cow position:
               chr21:11360009-11360239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               5-233
               

               Cow position:
               chr21:13585086-13584860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               5-257
               

               Cow position:
               chr21:28924084-28924340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               63, 15
               

               Conread position:
               6-170
               

               Cow position:
               chr21:724915-724746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               6-205
               

               Cow position:
               chr21:41621095-41621300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               6-207
               

               Cow position:
               chr21:17690165-17690371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               6-207
               

               Cow position:
               chr21:31159373-31159572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 122
               

               Conread position:
               6-208
               

               Cow position:
               chr21:5898428-5898224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               6-210
               

               Cow position:
               chr21:22210273-22210067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               6-211
               

               Cow position:
               chr21:10673099-10673302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               6-220
               

               Cow position:
               chr21:46849156-46848938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 59
               

               Conread position:
               6-238
               

               Cow position:
               chr21:28237741-28237499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 112
               

               Conread position:
               6-243
               

               Cow position:
               chr21:45355807-45356048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               7-211
               

               Cow position:
               chr21:31662437-31662648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               7-224
               

               Cow position:
               chr21:42022254-42022467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               7-232
               

               Cow position:
               chr21:47714031-47713809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               7-245
               

               Cow position:
               chr21:37345125-37344889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               7-260
               

               Cow position:
               chr21:42841628-42841370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               60, 188
               

               Conread position:
               9-167
               

               Cow position:
               chr21:37384459-37384619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               9-183
               

               Cow position:
               chr21:9940216-9940036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               9-244
               

               Cow position:
               chr21:38720226-38720459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 77
               

               Conread position:
               9-257
               

               Cow position:
               chr21:10538276-10538029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 21
               

               Conread position:
               10-186
               

               Cow position:
               chr21:47760744-47760923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 51
               

               Conread position:
               10-204
               

               Cow position:
               chr21:40192326-40192131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               58, 82
               

               Conread position:
               10-207
               

               Cow position:
               chr21:21169517-21169319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               50, 121
               

               Conread position:
               10-207
               

               Cow position:
               chr21:28030263-28030463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 180
               

               Conread position:
               10-220
               

               Cow position:
               chr21:11644995-11644775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               12-202
               

               Cow position:
               chr21:37235362-37235555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               12-220
               

               Cow position:
               chr21:938006-938209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               124, 8
               

               Conread position:
               15-252
               

               Cow position:
               chr21:12801772-12801526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 180
               

               Conread position:
               15-252
               

               Cow position:
               chr21:44671731-44671967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               119, 56
               

               Conread position:
               16-169
               

               Cow position:
               chr21:13656654-13656498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 33
               

               Conread position:
               16-182
               

               Cow position:
               chr21:45915729-45915567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               16-190
               

               Cow position:
               chr21:13738543-13738711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 112
               

               Conread position:
               16-199
               

               Cow position:
               chr21:44251860-44251676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               16-207
               

               Cow position:
               chr21:12301535-12301334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               16-220
               

               Cow position:
               chr21:28989589-28989802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 144
               

               Conread position:
               16-231
               

               Cow position:
               chr21:19258805-19259020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               52, 117
               

               Conread position:
               19-183
               

               Cow position:
               chr21:34739826-34739996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               19-219
               

               Cow position:
               chr21:7768418-7768627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               20-198
               

               Cow position:
               chr21:13036915-13036740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               21-220
               

               Cow position:
               chr21:802321-802127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               113, 40
               

               Conread position:
               25-219
               

               Cow position:
               chr21:44565730-44565533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               37, 113
               

               Conread position:
               25-225
               

               Cow position:
               chr21:6387990-6388194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               28-186
               

               Cow position:
               chr21:29405222-29405066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 43
               

               Conread position:
               28-207
               

               Cow position:
               chr21:44724372-44724196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               104, 133
               

               Conread position:
               28-278
               

               Cow position:
               chr21:18940583-18940331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               29-205
               

               Cow position:
               chr21:46132569-46132749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               31-252
               

               Cow position:
               chr21:1764868-1764651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               143, 100
               

               Conread position:
               33-207
               

               Cow position:
               chr21:12739077-12739255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               37, 145
               

               Conread position:
               34-225
               

               Cow position:
               chr21:41918247-41918047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 120
               

               Conread position:
               35-222
               

               Cow position:
               chr21:36508241-36508426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               163, 95
               

               Conread position:
               35-246
               

               Cow position:
               chr21:8546018-8545811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               36-220
               

               Cow position:
               chr21:24797663-24797846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               41-196
               

               Cow position:
               chr21:23460146-23460298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               42-258
               

               Cow position:
               chr21:30157802-30157577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               50-190
               

               Cow position:
               chr21:17695646-17695508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               57-207
               

               Cow position:
               chr21:37838040-37837890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 14
               

               Conread position:
               58-235
               

               Cow position:
               chr21:24266539-24266363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               59-212
               

               Cow position:
               chr21:40475527-40475680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               60-207
               

               Cow position:
               chr21:27677510-27677657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               61-244
               

               Cow position:
               chr21:20318542-20318726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               137, 70
               

               Conread position:
               62-201
               

               Cow position:
               chr21:12207772-12207633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 126
               

               Conread position:
               63-220
               

               Cow position:
               chr21:41610198-41610360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               64-237
               

               Cow position:
               chr21:42562666-42562832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               134, 11
               

               Conread position:
               64-372
               

               Cow position:
               chr21:30119726-30120017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               65, 159
               

               Conread position:
               65-207
               

               Cow position:
               chr21:9334520-9334664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               65-258
               

               Cow position:
               chr21:42463655-42463467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               136, 64
               

               Conread position:
               65-330
               

               Cow position:
               chr21:44592176-44591906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               69, 148
               

               Conread position:
               66-197
               

               Cow position:
               chr21:8231643-8231512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               65, 89
               

               Conread position:
               67-231
               

               Cow position:
               chr21:8213243-8213080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               67-279
               

               Cow position:
               chr21:17265966-17265751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 180
               

               Conread position:
               69-237
               

               Cow position:
               chr21:30980540-30980369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               71-197
               

               Cow position:
               chr21:712981-713109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               71-207
               

               Cow position:
               chr21:41040983-41041120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               71-249
               

               Cow position:
               chr21:13163898-13164079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               76-207
               

               Cow position:
               chr21:6736145-6736012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               76-220
               

               Cow position:
               chr21:7221296-7221152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               76-223
               

               Cow position:
               chr21:13225759-13225908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               76-278
               

               Cow position:
               chr21:26567734-26567530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 34
               

               Conread position:
               77-217
               

               Cow position:
               chr21:35647783-35647643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               57, 111
               

               Conread position:
               77-220
               

               Cow position:
               chr21:22939812-22939960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               77-273
               

               Cow position:
               chr21:46470231-46470421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               79-258
               

               Cow position:
               chr21:19360129-19359948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 163
               

               Conread position:
               83-237
               

               Cow position:
               chr21:37928700-37928856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               93-220
               

               Cow position:
               chr21:48482467-48482342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               93-252
               

               Cow position:
               chr21:28824165-28824003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 100
               

               Conread position:
               93-366
               

               Cow position:
               chr21:5130307-5130050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 96
               

               Conread position:
               102-300
               

               Cow position:
               chr21:13043950-13043748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 133
               

               Conread position:
               103-204
               

               Cow position:
               chr21:23370276-23370175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               103-234
               

               Cow position:
               chr21:25159243-25159375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               107-276
               

               Cow position:
               chr21:5137133-5136958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               112-232
               

               Cow position:
               chr21:27744105-27744226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               113-387
               

               Cow position:
               chr21:12200181-12200433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               218-369
               

               Cow position:
               chr21:10601023-10600869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-122
Cow position:	chr21:5455023-5454901 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	101
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	59, 0
Conread position:	1-130
Cow position:	chr21:22720193-22720326 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	104
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	65, 13
Conread position:	1-137
Cow position:	chr21:36756565-36756706 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	111
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	64, 39
Conread position:	1-143
Cow position:	chr21:17175117-17175255 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	114
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	63, 45
Conread position:	1-144
Cow position:	chr21:46463487-46463632 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	115
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	49, 129
Conread position:	1-147
Cow position:	chr21:33360067-33359925 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	116
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	66, 102
Conread position:	1-149
Cow position:	chr21:37014436-37014288 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	124
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	76, 48
Conread position:	1-154
Cow position:	chr21:5636752-5636597 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	119
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	114, 59
Conread position:	1-157
Cow position:	chr21:38664603-38664765 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	126
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	37, 26
Conread position:	1-161
Cow position:	chr21:18289629-18289793 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	119
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	61, 0
Conread position:	1-166
Cow position:	chr21:13840291-13840461 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	127
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	66, 157
Conread position:	1-168
Cow position:	chr21:17929872-17929700 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	123
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	63, 0
Conread position:	1-170
Cow position:	chr21:9036265-9036440 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	128
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	74, 0
Conread position:	1-171
Cow position:	chr21:44515230-44515404 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	127
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	76, 13
Conread position:	1-172
Cow position:	chr21:4281905-4281734 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	134
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	68, 48
Conread position:	1-175
Cow position:	chr21:10514770-10514951 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	128
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	68, 0
Conread position:	1-178
Cow position:	chr21:11250845-11251016 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	137
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	68, 0
Conread position:	1-179
Cow position:	chr21:43357292-43357108 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	145
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	68, 44
Conread position:	1-180
Cow position:	chr21:34391009-34390826 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	148
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	63, 0
Conread position:	1-181
Cow position:	chr21:977179-976998 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	143
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	42, 72