Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8041D21.3 |
| Conread position: | 98-189 |
| Cow position: | chr11:40467354-40467444 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 108-237 |
| Cow position: | chr11:50497250-50497125 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 149-352 |
| Cow position: | chr11:13894472-13894267 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 157-306 |
| Cow position: | chr11:62490066-62490216 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 162-486 |
| Cow position: | chr11:43913860-43914204 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 33, 119 |
| Conread position: | 165-441 |
| Cow position: | chr11:53130457-53130760 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 181-308 |
| Cow position: | chr11:21832308-21832182 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 184-396 |
| Cow position: | chr11:17112966-17112747 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 184-662 |
| Cow position: | chr11:17321322-17321850 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 353 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 120, 76 |
| Conread position: | 185-277 |
| Cow position: | chr11:26121330-26121238 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-277 |
| Cow position: | chr11:40133189-40133097 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-279 |
| Cow position: | chr11:27724297-27724203 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-293 |
| Cow position: | chr11:71705741-71705634 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 185-297 |
| Cow position: | chr11:17508828-17508940 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-297 |
| Cow position: | chr11:32198603-32198713 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 185-297 |
| Cow position: | chr11:46329162-46329273 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 185-297 |
| Cow position: | chr11:67848027-67847916 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 185-300 |
| Cow position: | chr11:8827443-8827556 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 185-302 |
| Cow position: | chr11:23251942-23251825 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 185-302 |
| Cow position: | chr11:41599066-41598949 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-302 |
| Cow position: | chr11:50236307-50236189 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 185-302 |
| Cow position: | chr11:70601439-70601323 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 185-302 |
| Cow position: | chr11:80826678-80826565 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 185-303 |
| Cow position: | chr11:25744984-25745100 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 185-303 |
| Cow position: | chr11:40402171-40402053 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-303 |
| Cow position: | chr11:44031661-44031779 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-304 |
| Cow position: | chr11:54856296-54856415 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:2821196-2821316 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:6156885-6156764 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:15062128-15062241 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:15373299-15373420 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:15503763-15503883 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:16251592-16251466 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:31900710-31900831 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:32749769-32749890 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:39115160-39115276 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:40250939-40250819 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:41812250-41812129 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:42292173-42292053 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:43593654-43593775 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:43897797-43897920 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:44637099-44636978 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:46247107-46247229 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:47566292-47566170 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:64029594-64029474 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:66231006-66231127 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:76114314-76114437 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 185-306 |
| Cow position: | chr11:81066920-81066799 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-307 |
| Cow position: | chr11:65970116-65970238 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-314 |
| Cow position: | chr11:3703982-3704110 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 185-345 |
| Cow position: | chr11:59702146-59702317 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 185-347 |
| Cow position: | chr11:47586685-47586510 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 185-350 |
| Cow position: | chr11:78819769-78819940 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-351 |
| Cow position: | chr11:1486207-1486028 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 185-351 |
| Cow position: | chr11:41577343-41577174 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 88 |
| Conread position: | 185-351 |
| Cow position: | chr11:81614967-81614799 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 129, 51 |
| Conread position: | 185-352 |
| Cow position: | chr11:18086676-18086499 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 108, 82 |
| Conread position: | 185-352 |
| Cow position: | chr11:19787810-19787981 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 131, 52 |
| Conread position: | 185-352 |
| Cow position: | chr11:23250222-23250395 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 185-352 |
| Cow position: | chr11:26551080-26551258 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 185-352 |
| Cow position: | chr11:27907217-27907392 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 185-352 |
| Cow position: | chr11:28848315-28848134 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 185-352 |
| Cow position: | chr11:53925423-53925605 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 185-353 |
| Cow position: | chr11:32067369-32067197 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 116, 52 |
| Conread position: | 185-353 |
| Cow position: | chr11:45277493-45277312 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 123, 18 |
| Conread position: | 185-353 |
| Cow position: | chr11:60515304-60515133 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 185-353 |
| Cow position: | chr11:63065320-63065498 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 119, 30 |
| Conread position: | 185-353 |
| Cow position: | chr11:70484201-70484017 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 185-358 |
| Cow position: | chr11:5032115-5031928 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 185-358 |
| Cow position: | chr11:19238495-19238310 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 185-358 |
| Cow position: | chr11:22103424-22103600 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 105, 85 |
| Conread position: | 185-358 |
| Cow position: | chr11:27248154-27248339 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 96 |
| Conread position: | 185-358 |
| Cow position: | chr11:44234019-44234200 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 93 |
| Conread position: | 185-358 |
| Cow position: | chr11:48672370-48672551 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 185-358 |
| Cow position: | chr11:58990172-58990356 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 185-358 |
| Cow position: | chr11:61454873-61454685 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 185-358 |
| Cow position: | chr11:62979139-62979327 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 185-358 |
| Cow position: | chr11:64932636-64932451 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 87 |
| Conread position: | 185-358 |
| Cow position: | chr11:78480460-78480647 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 185-361 |
| Cow position: | chr11:42232274-42232457 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 185-370 |
| Cow position: | chr11:6633050-6633250 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 185-370 |
| Cow position: | chr11:64043911-64044100 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 132, 28 |
| Conread position: | 185-385 |
| Cow position: | chr11:53147878-53147673 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 120, 85 |
| Conread position: | 185-395 |
| Cow position: | chr11:81174552-81174774 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 119, 85 |
| Conread position: | 185-396 |
| Cow position: | chr11:33294130-33293904 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 119, 213 |
| Conread position: | 185-396 |
| Cow position: | chr11:33350040-33349815 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 208 |
| Conread position: | 185-402 |
| Cow position: | chr11:35363157-35363385 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 116, 90 |
| Conread position: | 185-418 |
| Cow position: | chr11:70619716-70619955 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 185-440 |
| Cow position: | chr11:37068642-37068368 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 185-467 |
| Cow position: | chr11:3797071-3797349 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 150, 164 |
| Conread position: | 185-467 |
| Cow position: | chr11:8339743-8339435 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 118, 204 |
| Conread position: | 185-467 |
| Cow position: | chr11:10076436-10076739 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 97, 197 |
| Conread position: | 185-467 |
| Cow position: | chr11:21852622-21852331 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 113, 178 |
| Conread position: | 185-467 |
| Cow position: | chr11:71846687-71846375 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 119, 292 |
| Conread position: | 185-478 |
| Cow position: | chr11:26483383-26483693 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 121, 30 |
| Conread position: | 185-478 |
| Cow position: | chr11:27386678-27386358 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 123, 294 |
| Conread position: | 185-478 |
| Cow position: | chr11:58588005-58588327 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 85, 256 |
| Conread position: | 185-565 |
| Cow position: | chr11:3833686-3833277 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 120, 286 |
| Conread position: | 185-571 |
| Cow position: | chr11:64638861-64638433 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 185-574 |
| Cow position: | chr11:3303498-3303893 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 120, 228 |
| Conread position: | 185-576 |
| Cow position: | chr11:34112925-34113363 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 301 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 185-577 |
| Cow position: | chr11:81931408-81931018 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 185-577 |
| Cow position: | chr11:84774779-84775172 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 120, 85 |
| Conread position: | 185-578 |
| Cow position: | chr11:20601901-20602326 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 119, 219 |
| Conread position: | 185-595 |
| Cow position: | chr11:48271857-48272317 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 311 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 118, 67 |
| Conread position: | 185-595 |
| Cow position: | chr11:54333994-54334445 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 185-648 |
| Cow position: | chr11:7460918-7460456 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 181, 47 |
| Conread position: | 185-648 |
| Cow position: | chr11:34615930-34616430 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 322 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 123, 404 |
| Conread position: | 185-648 |
| Cow position: | chr11:77705426-77705919 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 330 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 84, 287 |
| Conread position: | 185-656 |
| Cow position: | chr11:55744135-55744646 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 237 |
| Conread position: | 185-662 |
| Cow position: | chr11:17860492-17859970 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 351 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 119, 277 |
| Conread position: | 185-662 |
| Cow position: | chr11:17890061-17889544 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 343 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 90, 243 |
| Conread position: | 185-662 |
| Cow position: | chr11:18509347-18508845 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 285 |
| Conread position: | 185-662 |
| Cow position: | chr11:35275957-35276434 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 188 |
| Conread position: | 185-662 |
| Cow position: | chr11:43524284-43524793 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 329 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 123, 227 |
| Conread position: | 185-662 |
| Cow position: | chr11:53778278-53778803 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 361 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 119, 37 |
| Conread position: | 185-662 |
| Cow position: | chr11:55347927-55348405 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 119, 45 |
| Conread position: | 185-662 |
| Cow position: | chr11:64334519-64335013 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 123, 273 |
| Conread position: | 185-664 |
| Cow position: | chr11:1380356-1380864 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 240 |
| Conread position: | 185-665 |
| Cow position: | chr11:10095004-10095529 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 436 |
| Conread position: | 185-665 |
| Cow position: | chr11:19890546-19891024 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 332 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 185-665 |
| Cow position: | chr11:38235899-38236431 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 356 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 320 |
| Conread position: | 185-667 |
| Cow position: | chr11:865958-866469 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 354 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 283 |
| Conread position: | 185-667 |
| Cow position: | chr11:21894488-21893961 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 357 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 185-672 |
| Cow position: | chr11:26067518-26066997 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 347 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 117, 417 |
| Conread position: | 185-672 |
| Cow position: | chr11:67345983-67345466 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 349 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 85, 294 |
| Conread position: | 186-302 |
| Cow position: | chr11:8495700-8495815 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 186-302 |
| Cow position: | chr11:41239609-41239496 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 186-302 |
| Cow position: | chr11:44036378-44036494 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-302 |
| Cow position: | chr11:51029014-51029131 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 186-306 |
| Cow position: | chr11:19592467-19592351 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 186-352 |
| Cow position: | chr11:393717-393892 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 186-352 |
| Cow position: | chr11:7718898-7718730 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 186-358 |
| Cow position: | chr11:64090423-64090237 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 122, 55 |
| Conread position: | 186-358 |
| Cow position: | chr11:68571009-68570827 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 186-365 |
| Cow position: | chr11:83357058-83357247 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 186-380 |
| Cow position: | chr11:75286745-75286539 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 168 |
| Conread position: | 186-396 |
| Cow position: | chr11:46451281-46451494 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 186-400 |
| Cow position: | chr11:37118147-37118374 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 189 |
| Conread position: | 186-577 |
| Cow position: | chr11:62376774-62376375 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 116, 84 |
| Conread position: | 186-644 |
| Cow position: | chr11:40467461-40466958 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 118, 294 |
| Conread position: | 186-665 |
| Cow position: | chr11:25792030-25791506 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 348 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 118, 280 |
| Conread position: | 186-666 |
| Cow position: | chr11:7873824-7874328 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 79, 191 |
| Conread position: | 186-666 |
| Cow position: | chr11:30165163-30165698 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 356 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 54, 290 |
| Conread position: | 187-300 |
| Cow position: | chr11:33001663-33001776 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-305 |
| Cow position: | chr11:66897136-66897022 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 187-306 |
| Cow position: | chr11:1849499-1849383 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 187-346 |
| Cow position: | chr11:24967129-24967291 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 73 |
| Conread position: | 187-346 |
| Cow position: | chr11:26638460-26638621 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 187-353 |
| Cow position: | chr11:2911157-2910980 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 187-358 |
| Cow position: | chr11:3393546-3393362 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 121, 67 |
| Conread position: | 187-358 |
| Cow position: | chr11:25386734-25386910 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 187-358 |
| Cow position: | chr11:39034125-39034296 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 187-358 |
| Cow position: | chr11:40818980-40818793 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 5 |
| Conread position: | 187-360 |
| Cow position: | chr11:33413897-33414085 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 187-364 |
| Cow position: | chr11:50197781-50197589 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 187-369 |
| Cow position: | chr11:2092011-2092197 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 187-565 |
| Cow position: | chr11:41809813-41809406 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 121, 88 |
| Conread position: | 187-591 |
| Cow position: | chr11:69118963-69119407 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 187-616 |
| Cow position: | chr11:37278535-37278087 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 301 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 121, 81 |
| Conread position: | 187-668 |
| Cow position: | chr11:5328459-5328975 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 336 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 112, 83 |
| Conread position: | 188-306 |
| Cow position: | chr11:4732003-4732121 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-306 |
| Cow position: | chr11:64047985-64048103 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-348 |
| Cow position: | chr11:11996219-11996058 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 46 |
| Conread position: | 188-352 |
| Cow position: | chr11:37974590-37974765 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 188-364 |
| Cow position: | chr11:61137533-61137354 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 188-369 |
| Cow position: | chr11:65495663-65495477 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 127, 116 |
| Conread position: | 188-567 |
| Cow position: | chr11:50072642-50073026 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 28 |
| Conread position: | 188-632 |
| Cow position: | chr11:55117138-55117599 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 308 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 120, 39 |
| Conread position: | 188-671 |
| Cow position: | chr11:77759092-77758569 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 351 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 120, 43 |
| Conread position: | 189-306 |
| Cow position: | chr11:12555698-12555815 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 189-358 |
| Cow position: | chr11:15285952-15285768 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 189-359 |
| Cow position: | chr11:35684833-35684647 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 189-479 |
| Cow position: | chr11:4323032-4323340 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 115, 273 |
| Conread position: | 189-573 |
| Cow position: | chr11:73512754-73512349 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 129, 190 |
| Conread position: | 189-648 |
| Cow position: | chr11:77751100-77750592 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 347 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 189-662 |
| Cow position: | chr11:42016970-42016456 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 346 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 109, 41 |
| Conread position: | 191-658 |
| Cow position: | chr11:86926254-86925785 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 192-306 |
| Cow position: | chr11:27326152-27326267 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 192-358 |
| Cow position: | chr11:73924890-73924713 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 192-466 |
| Cow position: | chr11:439990-439692 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 112, 155 |
| Conread position: | 193-306 |
| Cow position: | chr11:81913977-81914090 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-356 |
| Cow position: | chr11:57873540-57873707 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 193-484 |
| Cow position: | chr11:70383025-70382703 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 111, 71 |
| Conread position: | 193-662 |
| Cow position: | chr11:80555928-80556401 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 305 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 159, 125 |
| Conread position: | 198-307 |
| Cow position: | chr11:3780750-3780641 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 198-431 |
| Cow position: | chr11:37752686-37752445 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 103, 194 |
| Conread position: | 198-561 |
| Cow position: | chr11:7394839-7395212 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 126, 32 |
| Conread position: | 199-306 |
| Cow position: | chr11:47662401-47662507 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 200-396 |
| Cow position: | chr11:17278984-17278783 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 200-476 |
| Cow position: | chr11:39118462-39118734 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 201-369 |
| Cow position: | chr11:63508116-63508287 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 211-479 |
| Cow position: | chr11:18588892-18588604 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 97, 35 |
| Conread position: | 211-637 |
| Cow position: | chr11:35238516-35238958 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 213 |
| Conread position: | 223-672 |
| Cow position: | chr11:78381345-78380875 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 231-646 |
| Cow position: | chr11:83066202-83066659 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 250 |
| Conread position: | 247-597 |
| Cow position: | chr11:3282782-3283144 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 40, 136 |
| Conread position: | 248-571 |
| Cow position: | chr11:67246553-67246878 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 248-648 |
| Cow position: | chr11:13043412-13042979 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 248-666 |
| Cow position: | chr11:77745529-77745060 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 253-668 |
| Cow position: | chr11:19247466-19247015 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 201 |
| Conread position: | 261-662 |
| Cow position: | chr11:83397642-83398090 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 235 |
| Conread position: | 262-662 |
| Cow position: | chr11:31227733-31228136 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 105 |
| Conread position: | 269-648 |
| Cow position: | chr11:34467348-34467731 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 39, 193 |
| Conread position: | 317-668 |
| Cow position: | chr11:41215552-41215923 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 317-668 |
| Cow position: | chr11:68912951-68913332 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 158 |
| Conread position: | 348-657 |
| Cow position: | chr11:81406306-81405989 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 348-662 |
| Cow position: | chr11:49057255-49057566 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 15 |
| Conread position: | 348-671 |
| Cow position: | chr11:13592589-13592931 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 349-649 |
| Cow position: | chr11:63435371-63435692 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 349-662 |
| Cow position: | chr11:37804701-37804369 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 349-664 |
| Cow position: | chr11:15772866-15772528 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 349-665 |
| Cow position: | chr11:6245175-6245507 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 349-672 |
| Cow position: | chr11:19592141-19591803 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 103 |
| Conread position: | 349-672 |
| Cow position: | chr11:32254365-32254023 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 249 |
| Conread position: | 349-672 |
| Cow position: | chr11:48295886-48296218 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 349-672 |
| Cow position: | chr11:84385784-84385444 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 350-672 |
| Cow position: | chr11:76889903-76890234 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 354-666 |
| Cow position: | chr11:70600962-70600640 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 40, 234 |
| Conread position: | 357-662 |
| Cow position: | chr11:52690661-52690342 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 6 |
| Conread position: | 360-662 |
| Cow position: | chr11:39462492-39462802 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 360-664 |
| Cow position: | chr11:2084004-2084332 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 378-666 |
| Cow position: | chr11:53510617-53510308 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 389-658 |
| Cow position: | chr11:43360886-43360608 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 54, 68 |
| Conread position: | 400-668 |
| Cow position: | chr11:53816766-53817044 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 435-662 |
| Cow position: | chr11:49872931-49872704 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 464-664 |
| Cow position: | chr11:68570394-68570196 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 145, 9 |
| Conread position: | 476-672 |
| Cow position: | chr11:7500742-7500942 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 476-672 |
| Cow position: | chr11:75285766-75285563 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 477-648 |
| Cow position: | chr11:2835853-2836029 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 477-672 |
| Cow position: | chr11:37564872-37565063 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 478-627 |
| Cow position: | chr11:35926909-35926760 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 140, 73 |
| Conread position: | 478-653 |
| Cow position: | chr11:30209824-30209649 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 153 |
| Conread position: | 478-663 |
| Cow position: | chr11:43914287-43914477 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 478-665 |
| Cow position: | chr11:32777675-32777859 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 107, 47 |
| Conread position: | 480-660 |
| Cow position: | chr11:47110250-47110437 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 480-662 |
| Cow position: | chr11:17517396-17517582 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 161 |
| Conread position: | 480-662 |
| Cow position: | chr11:18924743-18924930 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 480-662 |
| Cow position: | chr11:25603945-25604136 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 480-665 |
| Cow position: | chr11:46747863-46747673 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 480-666 |
| Cow position: | chr11:38334521-38334708 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 480-672 |
| Cow position: | chr11:15369385-15369581 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 192 |
| Conread position: | 480-672 |
| Cow position: | chr11:29677204-29677401 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 480-672 |
| Cow position: | chr11:35347755-35347557 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 480-672 |
| Cow position: | chr11:62742645-62742455 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 17, 99 |
| Conread position: | 480-672 |
| Cow position: | chr11:68883716-68883914 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 480-672 |
| Cow position: | chr11:70483854-70483658 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 480-672 |
| Cow position: | chr11:87172079-87171882 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 126 |
| Conread position: | 482-672 |
| Cow position: | chr11:37041975-37042166 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 184 |
| Conread position: | 485-662 |
| Cow position: | chr11:10066351-10066532 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 150 |
| Conread position: | 485-662 |
| Cow position: | chr11:36300575-36300401 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 133, 82 |
| Conread position: | 485-664 |
| Cow position: | chr11:80370117-80370299 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 485-668 |
| Cow position: | chr11:27907783-27907960 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 137, 55 |
| Conread position: | 485-668 |
| Cow position: | chr11:63499124-63498940 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 485-672 |
| Cow position: | chr11:33373968-33374158 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 186 |
| Conread position: | 485-672 |
| Cow position: | chr11:56288550-56288739 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 486-668 |
| Cow position: | chr11:37100165-37099983 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 132, 89 |
| Conread position: | 488-631 |
| Cow position: | chr11:17807953-17807809 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 489-656 |
| Cow position: | chr11:63484948-63485109 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 129, 86 |
| Conread position: | 489-662 |
| Cow position: | chr11:19579005-19578839 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 489-662 |
| Cow position: | chr11:77241712-77241885 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 489-668 |
| Cow position: | chr11:63407706-63407883 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 490-662 |
| Cow position: | chr11:16314884-16315057 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 490-662 |
| Cow position: | chr11:76896363-76896190 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 491-660 |
| Cow position: | chr11:29786486-29786312 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 491-662 |
| Cow position: | chr11:13940198-13940370 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 76, 119 |
| Conread position: | 491-662 |
| Cow position: | chr11:46427395-46427224 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 146 |
| Conread position: | 491-665 |
| Cow position: | chr11:13864092-13863914 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 491-666 |
| Cow position: | chr11:1980255-1980078 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 491-668 |
| Cow position: | chr11:21830197-21830021 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 127, 76 |
| Conread position: | 491-668 |
| Cow position: | chr11:26442492-26442313 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 491-672 |
| Cow position: | chr11:36917764-36917572 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 491-672 |
| Cow position: | chr11:42084663-42084480 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 491-672 |
| Cow position: | chr11:53773694-53773877 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 491-672 |
| Cow position: | chr11:66939580-66939398 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 491-672 |
| Cow position: | chr11:81066037-81065857 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 69 |
| Conread position: | 491-672 |
| Cow position: | chr11:86895389-86895566 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 127, 76 |
| Conread position: | 492-671 |
| Cow position: | chr11:47784788-47784972 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 492-672 |
| Cow position: | chr11:41278199-41278379 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 126, 176 |
| Conread position: | 493-668 |
| Cow position: | chr11:73573660-73573836 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 124, 154 |
| Conread position: | 496-666 |
| Cow position: | chr11:6320115-6319942 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 496-672 |
| Cow position: | chr11:5961323-5961500 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 496-672 |
| Cow position: | chr11:30322475-30322300 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 122, 71 |
| Conread position: | 496-672 |
| Cow position: | chr11:79666244-79666069 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 122, 87 |
| Conread position: | 497-632 |
| Cow position: | chr11:34136259-34136394 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 121, 105 |
| Conread position: | 497-645 |
| Cow position: | chr11:62889875-62889726 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-646 |
| Cow position: | chr11:21173419-21173270 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 497-648 |
| Cow position: | chr11:35109520-35109371 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 497-648 |
| Cow position: | chr11:46884392-46884544 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-648 |
| Cow position: | chr11:60720437-60720285 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-662 |
| Cow position: | chr11:8670030-8670200 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 497-662 |
| Cow position: | chr11:26057632-26057464 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 497-662 |
| Cow position: | chr11:35733065-35732900 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 88 |
| Conread position: | 497-662 |
| Cow position: | chr11:44619973-44620136 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 121, 138 |
| Conread position: | 497-662 |
| Cow position: | chr11:45350493-45350327 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 121, 148 |
| Conread position: | 497-662 |
| Cow position: | chr11:49396507-49396343 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 82 |
| Conread position: | 497-662 |
| Cow position: | chr11:66041297-66041455 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 81 |
| Conread position: | 497-662 |
| Cow position: | chr11:66099844-66099674 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 497-662 |
| Cow position: | chr11:69417420-69417586 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-664 |
| Cow position: | chr11:12555287-12555119 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-666 |
| Cow position: | chr11:62620395-62620563 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 121, 90 |
| Conread position: | 497-672 |
| Cow position: | chr11:83028012-83028185 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 119 |
| Conread position: | 498-668 |
| Cow position: | chr11:3739973-3740153 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 498-672 |
| Cow position: | chr11:17553061-17552886 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 499-659 |
| Cow position: | chr11:33369171-33369332 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 499-660 |
| Cow position: | chr11:57767210-57767370 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 499-670 |
| Cow position: | chr11:38223767-38223601 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 119, 46 |
| Conread position: | 499-672 |
| Cow position: | chr11:4621410-4621242 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 119, 78 |
| Conread position: | 499-672 |
| Cow position: | chr11:67208273-67208443 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 161, 118 |
| Conread position: | 500-634 |
| Cow position: | chr11:35139930-35140065 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 500-648 |
| Cow position: | chr11:43641408-43641557 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 500-668 |
| Cow position: | chr11:3896679-3896509 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 500-672 |
| Cow position: | chr11:46314032-46314207 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 500-672 |
| Cow position: | chr11:62606438-62606612 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 501-661 |
| Cow position: | chr11:44176618-44176775 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 505-666 |
| Cow position: | chr11:36361616-36361453 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 506-672 |
| Cow position: | chr11:21590413-21590582 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 507-662 |
| Cow position: | chr11:51683244-51683399 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 60 |
| Conread position: | 507-666 |
| Cow position: | chr11:44016272-44016432 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 508-664 |
| Cow position: | chr11:17369560-17369711 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 110, 85 |
| Conread position: | 508-665 |
| Cow position: | chr11:33271460-33271615 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 517-665 |
| Cow position: | chr11:26823148-26823298 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.