Cow genome map

Conread name: Ss1.1-Pig4-TMW8041D21.3

Conread position: 165-358
Cow position: chr19:19499903-19499700 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 139, 114

Conread position: 165-662
Cow position: chr19:46181160-46180672 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 330
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 111, 43

Conread position: 179-566
Cow position: chr19:30533604-30534022 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 285
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 5, 91

Conread position: 184-353
Cow position: chr19:31266107-31265933 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 184-358
Cow position: chr19:42240621-42240438 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 121, 17

Conread position: 184-478
Cow position: chr19:1504814-1505116 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 53

Conread position: 184-478
Cow position: chr19:47727900-47727586 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 101

Conread position: 185-277
Cow position: chr19:29476966-29477058 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 185-293
Cow position: chr19:30237704-30237812 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 185-297
Cow position: chr19:11487936-11487824 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 185-297
Cow position: chr19:19804863-19804751 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 185-297
Cow position: chr19:35416297-35416188 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 185-299
Cow position: chr19:37333197-37333311 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 16

Conread position: 185-302
Cow position: chr19:4195398-4195514 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 185-303
Cow position: chr19:7978889-7978774 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 185-303
Cow position: chr19:21587609-21587728 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 185-303
Cow position: chr19:23005696-23005578 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 185-303
Cow position: chr19:24358554-24358437 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 185-303
Cow position: chr19:25655716-25655598 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 26

Conread position: 185-303
Cow position: chr19:31378946-31378822 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 185-303
Cow position: chr19:33286919-33287037 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 185-303
Cow position: chr19:39056914-39057032 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 185-306
Cow position: chr19:12608228-12608107 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 185-306
Cow position: chr19:14929003-14928880 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 185-306
Cow position: chr19:31396221-31396101 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 185-306
Cow position: chr19:32178040-32177920 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 185-306
Cow position: chr19:39077997-39078118 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 185-306
Cow position: chr19:39661873-39661754 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 185-306
Cow position: chr19:53463499-53463379 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 185-307
Cow position: chr19:1580911-1580792 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 185-307
Cow position: chr19:52773507-52773385 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 185-346
Cow position: chr19:6892108-6891941 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 131, 0

Conread position: 185-352
Cow position: chr19:43189742-43189562 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 185-353
Cow position: chr19:1901332-1901149 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 185-353
Cow position: chr19:14253304-14253486 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 119, 16

Conread position: 185-353
Cow position: chr19:21114976-21115155 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 185-353
Cow position: chr19:25041659-25041479 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 185-353
Cow position: chr19:34956028-34955845 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 185-353
Cow position: chr19:39245569-39245747 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 185-358
Cow position: chr19:11817260-11817077 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 116, 85

Conread position: 185-365
Cow position: chr19:24956759-24956582 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 30

Conread position: 185-392
Cow position: chr19:5934760-5934548 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 198

Conread position: 185-396
Cow position: chr19:14573039-14573264 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 89, 192

Conread position: 185-396
Cow position: chr19:20671232-20671009 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 190

Conread position: 185-396
Cow position: chr19:23785858-23786080 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 91, 26

Conread position: 185-396
Cow position: chr19:36125257-36125475 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 75

Conread position: 185-396
Cow position: chr19:39576900-39576683 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 91

Conread position: 185-432
Cow position: chr19:39876846-39876574 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 54

Conread position: 185-432
Cow position: chr19:54294914-54294642 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 185-438
Cow position: chr19:27348592-27348320 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 85

Conread position: 185-440
Cow position: chr19:33932474-33932193 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 65, 146

Conread position: 185-453
Cow position: chr19:10786689-10786401 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 10

Conread position: 185-461
Cow position: chr19:46918510-46918821 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 299

Conread position: 185-467
Cow position: chr19:4340240-4339939 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 228

Conread position: 185-470
Cow position: chr19:23403981-23403676 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 195

Conread position: 185-477
Cow position: chr19:28014150-28014466 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 116, 23

Conread position: 185-478
Cow position: chr19:7543091-7543401 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 123, 187

Conread position: 185-478
Cow position: chr19:21092449-21092756 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 131, 84

Conread position: 185-478
Cow position: chr19:39697742-39698051 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 123, 94

Conread position: 185-561
Cow position: chr19:17274047-17273650 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 120, 46

Conread position: 185-562
Cow position: chr19:25696536-25696140 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 261
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 89

Conread position: 185-564
Cow position: chr19:6515930-6516359 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 292
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 85

Conread position: 185-564
Cow position: chr19:31594968-31595393 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 295
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 120, 289

Conread position: 185-573
Cow position: chr19:5656441-5656023 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 277
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 185-577
Cow position: chr19:29115428-29115848 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 288
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 42

Conread position: 185-585
Cow position: chr19:14592723-14593170 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 301
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 123, 45

Conread position: 185-615
Cow position: chr19:16566828-16567292 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 309
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 123, 100

Conread position: 185-631
Cow position: chr19:32457312-32457801 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 338
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 119, 26

Conread position: 185-662
Cow position: chr19:730061-729560 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 365

Conread position: 185-662
Cow position: chr19:3246365-3245867 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 324
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 139, 107

Conread position: 185-663
Cow position: chr19:13267517-13267017 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 338
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 89, 289

Conread position: 185-665
Cow position: chr19:21198796-21199341 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 378
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 290

Conread position: 185-672
Cow position: chr19:255122-254599 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 349
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 123, 272

Conread position: 185-672
Cow position: chr19:6688336-6687801 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 519

Conread position: 186-302
Cow position: chr19:742507-742391 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 186-306
Cow position: chr19:3222473-3222590 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 186-306
Cow position: chr19:3511092-3511212 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 186-306
Cow position: chr19:8033409-8033530 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 186-306
Cow position: chr19:19963712-19963831 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 186-306
Cow position: chr19:25168621-25168503 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 186-306
Cow position: chr19:25999305-25999422 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 186-358
Cow position: chr19:30936222-30936053 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 43

Conread position: 186-358
Cow position: chr19:37633682-37633495 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 186-482
Cow position: chr19:630615-630913 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 57, 122

Conread position: 186-556
Cow position: chr19:51401340-51400930 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 228

Conread position: 186-630
Cow position: chr19:44144235-44143783 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 307
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 108, 44

Conread position: 186-649
Cow position: chr19:11171548-11171040 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 330
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 117, 99

Conread position: 186-662
Cow position: chr19:1355283-1355794 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 333
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 118, 217

Conread position: 186-662
Cow position: chr19:12697997-12698505 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 347
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 122, 40

Conread position: 186-662
Cow position: chr19:15437779-15438293 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 228

Conread position: 186-662
Cow position: chr19:43431648-43431134 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 351
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 45

Conread position: 187-306
Cow position: chr19:14473107-14472988 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 187-306
Cow position: chr19:23393641-23393759 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 187-306
Cow position: chr19:36221607-36221726 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 187-353
Cow position: chr19:3489168-3489345 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 187-353
Cow position: chr19:38755969-38756144 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 19

Conread position: 187-353
Cow position: chr19:39338866-39338695 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 26

Conread position: 187-358
Cow position: chr19:8375630-8375452 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 187-358
Cow position: chr19:22765288-22765474 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 187-559
Cow position: chr19:42726025-42726421 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 271

Conread position: 187-656
Cow position: chr19:23304834-23304307 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 362
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 61, 297

Conread position: 187-660
Cow position: chr19:12601483-12601988 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 342
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 116, 428

Conread position: 187-661
Cow position: chr19:24061968-24062461 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 332
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 121, 215

Conread position: 187-662
Cow position: chr19:33747524-33748040 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 331
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 108, 285

Conread position: 188-306
Cow position: chr19:13755563-13755680 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 188-306
Cow position: chr19:24669696-24669578 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 188-306
Cow position: chr19:38596288-38596405 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 188-351
Cow position: chr19:42777571-42777733 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 118

Conread position: 188-358
Cow position: chr19:19490264-19490096 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 38

Conread position: 188-358
Cow position: chr19:37502984-37502810 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 105

Conread position: 188-534
Cow position: chr19:4445948-4445559 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 265
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 273

Conread position: 189-394
Cow position: chr19:43703029-43702820 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 148

Conread position: 189-457
Cow position: chr19:39623108-39622833 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 116, 36

Conread position: 189-656
Cow position: chr19:20661744-20661230 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 337
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 81, 443

Conread position: 192-358
Cow position: chr19:38392473-38392655 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 192-358
Cow position: chr19:39751161-39751338 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 111, 48

Conread position: 192-668
Cow position: chr19:2577252-2577755 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 155

Conread position: 193-306
Cow position: chr19:33912955-33912843 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 193-306
Cow position: chr19:46822116-46822229 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 193-355
Cow position: chr19:34287490-34287652 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 77

Conread position: 194-392
Cow position: chr19:12019135-12019356 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 154

Conread position: 197-403
Cow position: chr19:28038941-28038735 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 109

Conread position: 198-303
Cow position: chr19:27180574-27180472 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 198-659
Cow position: chr19:47859611-47859129 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 333
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 108

Conread position: 201-661
Cow position: chr19:53543194-53542700 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 333
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 101, 74

Conread position: 211-648
Cow position: chr19:24192099-24192536 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 293
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 97, 237

Conread position: 213-358
Cow position: chr19:24936119-24935961 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 241-571
Cow position: chr19:30551786-30552116 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 72

Conread position: 247-664
Cow position: chr19:36844980-36845435 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 313
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 31

Conread position: 250-666
Cow position: chr19:5913216-5912763 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 53, 238

Conread position: 252-662
Cow position: chr19:12748029-12747589 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 127

Conread position: 262-672
Cow position: chr19:55589978-55590432 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 303
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 209

Conread position: 271-662
Cow position: chr19:30471582-30471169 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 281
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 138

Conread position: 344-672
Cow position: chr19:55394761-55395106 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 18

Conread position: 348-672
Cow position: chr19:43035101-43035440 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 15

Conread position: 349-645
Cow position: chr19:21816822-21817137 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 349-653
Cow position: chr19:25526145-25526458 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 25

Conread position: 349-671
Cow position: chr19:38111332-38111667 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 14

Conread position: 351-664
Cow position: chr19:25041376-25041055 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 18

Conread position: 363-656
Cow position: chr19:34166243-34166550 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 87

Conread position: 399-653
Cow position: chr19:35870707-35870966 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 47, 73

Conread position: 400-662
Cow position: chr19:24453595-24453320 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 34

Conread position: 477-658
Cow position: chr19:25927408-25927226 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 103

Conread position: 478-666
Cow position: chr19:11211276-11211081 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 480-672
Cow position: chr19:12945302-12945106 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 101

Conread position: 480-672
Cow position: chr19:39664572-39664376 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 100

Conread position: 480-672
Cow position: chr19:51294279-51294087 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 46

Conread position: 482-666
Cow position: chr19:7794663-7794842 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 136, 58

Conread position: 485-666
Cow position: chr19:41718955-41718770 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 83

Conread position: 488-649
Cow position: chr19:33913543-33913705 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 488-665
Cow position: chr19:51621164-51620986 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 0

Conread position: 488-672
Cow position: chr19:19468400-19468585 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 130, 75

Conread position: 488-672
Cow position: chr19:22871239-22871059 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 129, 90

Conread position: 489-661
Cow position: chr19:2221058-2220885 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 489-662
Cow position: chr19:25382670-25382494 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 489-672
Cow position: chr19:31763508-31763694 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 134

Conread position: 491-653
Cow position: chr19:39698305-39698466 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 127, 84

Conread position: 491-653
Cow position: chr19:55247650-55247807 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 127, 84

Conread position: 491-653
Cow position: chr19:55301117-55300955 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 21

Conread position: 491-662
Cow position: chr19:4586528-4586361 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 84

Conread position: 491-662
Cow position: chr19:23416863-23416691 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 127, 11

Conread position: 491-662
Cow position: chr19:40127147-40126977 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 88

Conread position: 491-662
Cow position: chr19:52356271-52356440 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 83

Conread position: 491-666
Cow position: chr19:8185222-8185397 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 88

Conread position: 491-672
Cow position: chr19:14253651-14253833 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 491-672
Cow position: chr19:28924776-28924959 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 92

Conread position: 496-655
Cow position: chr19:51637064-51637226 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 496-672
Cow position: chr19:4537240-4537069 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 496-672
Cow position: chr19:23297758-23297935 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 497-648
Cow position: chr19:5522130-5521984 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 82

Conread position: 497-648
Cow position: chr19:38021469-38021616 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 28

Conread position: 497-649
Cow position: chr19:35444482-35444329 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 497-650
Cow position: chr19:42868040-42868194 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 497-656
Cow position: chr19:15076175-15076009 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 38

Conread position: 497-656
Cow position: chr19:43373064-43373230 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 497-659
Cow position: chr19:35073028-35072866 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 82

Conread position: 497-662
Cow position: chr19:4486125-4485960 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 497-662
Cow position: chr19:12761078-12760912 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 497-662
Cow position: chr19:14588430-14588593 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 134

Conread position: 497-662
Cow position: chr19:35245967-35246133 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 497-662
Cow position: chr19:38732164-38732326 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 82

Conread position: 497-663
Cow position: chr19:7558570-7558735 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 43

Conread position: 497-664
Cow position: chr19:17354883-17355049 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 121, 61

Conread position: 497-664
Cow position: chr19:27968671-27968504 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 112

Conread position: 497-664
Cow position: chr19:43413808-43413969 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 121, 78

Conread position: 497-668
Cow position: chr19:42544553-42544724 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 74

Conread position: 497-671
Cow position: chr19:29139227-29139402 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 0

Conread position: 497-671
Cow position: chr19:30007217-30007382 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 43

Conread position: 497-671
Cow position: chr19:30227545-30227719 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 121, 150

Conread position: 497-672
Cow position: chr19:23378701-23378875 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 91

Conread position: 498-666
Cow position: chr19:55742259-55742089 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 499-662
Cow position: chr19:37467034-37466873 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 123, 89

Conread position: 500-662
Cow position: chr19:23831371-23831537 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 500-672
Cow position: chr19:42776460-42776632 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 21

Conread position: 501-666
Cow position: chr19:24068255-24068089 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 501-667
Cow position: chr19:12497038-12497199 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 10

Conread position: 502-625
Cow position: chr19:45923235-45923358 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 505-662
Cow position: chr19:49290424-49290270 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 74

Conread position: 507-665
Cow position: chr19:19738035-19738194 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 510-665
Cow position: chr19:42217278-42217121 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 92

Conread position: 528-662
Cow position: chr19:38637731-38637596 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 0

Show alignments to all cow chromosomes.