Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8041D21.3 |
| Conread position: | 151-306 |
| Cow position: | chr23:1883041-1883196 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-353 |
| Cow position: | chr23:35929662-35929848 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 117 |
| Conread position: | 185-279 |
| Cow position: | chr23:28916222-28916316 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-296 |
| Cow position: | chr23:479209-479320 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-297 |
| Cow position: | chr23:14245192-14245304 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-297 |
| Cow position: | chr23:29441318-29441206 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-301 |
| Cow position: | chr23:7311554-7311670 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-301 |
| Cow position: | chr23:18802591-18802475 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-302 |
| Cow position: | chr23:12896925-12896802 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 185-303 |
| Cow position: | chr23:1905710-1905828 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-303 |
| Cow position: | chr23:1922385-1922268 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 185-303 |
| Cow position: | chr23:4579355-4579235 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 185-303 |
| Cow position: | chr23:13945439-13945557 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-303 |
| Cow position: | chr23:39793132-39793254 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 185-304 |
| Cow position: | chr23:9231854-9231736 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:772333-772452 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:5870505-5870380 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:7374555-7374677 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:9712795-9712916 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:16058281-16058402 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:16072912-16073033 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:17796635-17796514 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:19002386-19002266 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:20752695-20752815 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:21789089-21788968 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:25363025-25363146 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:27529606-27529489 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:28118418-28118300 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 185-306 |
| Cow position: | chr23:39762050-39762169 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 185-315 |
| Cow position: | chr23:34315286-34315159 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 63, 77 |
| Conread position: | 185-344 |
| Cow position: | chr23:14642515-14642356 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 85 |
| Conread position: | 185-351 |
| Cow position: | chr23:9132984-9132803 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 185-352 |
| Cow position: | chr23:1321509-1321338 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 47 |
| Conread position: | 185-352 |
| Cow position: | chr23:4273863-4274045 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 185-352 |
| Cow position: | chr23:7392601-7392425 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 185-352 |
| Cow position: | chr23:22574376-22574200 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 116, 75 |
| Conread position: | 185-352 |
| Cow position: | chr23:29175671-29175845 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 117, 53 |
| Conread position: | 185-352 |
| Cow position: | chr23:30633698-30633516 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 185-352 |
| Cow position: | chr23:38708891-38709073 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 185-353 |
| Cow position: | chr23:20586030-20585854 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 185-353 |
| Cow position: | chr23:32309363-32309541 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 185-357 |
| Cow position: | chr23:9595147-9594965 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-358 |
| Cow position: | chr23:7402388-7402568 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 185-358 |
| Cow position: | chr23:20744907-20744725 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 185-358 |
| Cow position: | chr23:28052959-28053142 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 120, 173 |
| Conread position: | 185-363 |
| Cow position: | chr23:406476-406294 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 100 |
| Conread position: | 185-369 |
| Cow position: | chr23:27403028-27403221 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 157 |
| Conread position: | 185-396 |
| Cow position: | chr23:18322735-18322515 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 185-396 |
| Cow position: | chr23:39309432-39309214 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 102, 49 |
| Conread position: | 185-396 |
| Cow position: | chr23:40502820-40502607 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 45 |
| Conread position: | 185-400 |
| Cow position: | chr23:34356340-34356548 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 174, 85 |
| Conread position: | 185-446 |
| Cow position: | chr23:10844008-10844272 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 169, 45 |
| Conread position: | 185-467 |
| Cow position: | chr23:37065523-37065840 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 119, 6 |
| Conread position: | 185-473 |
| Cow position: | chr23:6720595-6720286 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 185-478 |
| Cow position: | chr23:14164722-14164397 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 292 |
| Conread position: | 185-478 |
| Cow position: | chr23:25669384-25669092 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 118, 13 |
| Conread position: | 185-565 |
| Cow position: | chr23:36129216-36128807 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 185-566 |
| Cow position: | chr23:10014230-10014634 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 45 |
| Conread position: | 185-573 |
| Cow position: | chr23:40781010-40781444 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 185-602 |
| Cow position: | chr23:9268272-9268721 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 119, 85 |
| Conread position: | 185-637 |
| Cow position: | chr23:34416251-34416741 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 315 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 274 |
| Conread position: | 185-646 |
| Cow position: | chr23:7175305-7175799 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 330 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 185-656 |
| Cow position: | chr23:344493-343982 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 343 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 116, 39 |
| Conread position: | 185-656 |
| Cow position: | chr23:9734101-9734616 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 344 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 85, 303 |
| Conread position: | 185-656 |
| Cow position: | chr23:25864997-25864498 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 339 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 124, 47 |
| Conread position: | 185-661 |
| Cow position: | chr23:5162109-5162643 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 370 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 185-662 |
| Cow position: | chr23:6223692-6224170 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 185-662 |
| Cow position: | chr23:10852737-10853249 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 47 |
| Conread position: | 185-662 |
| Cow position: | chr23:24509385-24509886 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 340 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 111, 90 |
| Conread position: | 185-662 |
| Cow position: | chr23:26741768-26741288 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 315 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 123, 137 |
| Conread position: | 185-662 |
| Cow position: | chr23:33601838-33601331 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 352 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 118, 75 |
| Conread position: | 185-662 |
| Cow position: | chr23:38455503-38454961 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 370 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 123, 208 |
| Conread position: | 185-665 |
| Cow position: | chr23:21336807-21336260 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 361 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 185-666 |
| Cow position: | chr23:13520140-13520650 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 355 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 119, 64 |
| Conread position: | 185-666 |
| Cow position: | chr23:25675987-25675491 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 341 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 174, 30 |
| Conread position: | 185-668 |
| Cow position: | chr23:8698128-8698633 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 325 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 119, 51 |
| Conread position: | 185-672 |
| Cow position: | chr23:1337632-1337096 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 369 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 63, 116 |
| Conread position: | 185-672 |
| Cow position: | chr23:40777945-40778475 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 360 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 186-302 |
| Cow position: | chr23:39780295-39780411 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-461 |
| Cow position: | chr23:11844973-11845262 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 186-653 |
| Cow position: | chr23:11128916-11129429 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 186-667 |
| Cow position: | chr23:22298333-22297823 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 84 |
| Conread position: | 187-277 |
| Cow position: | chr23:39389948-39390038 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 77 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-306 |
| Cow position: | chr23:221754-221873 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-306 |
| Cow position: | chr23:8959283-8959399 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 187-306 |
| Cow position: | chr23:26003748-26003867 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-353 |
| Cow position: | chr23:361227-361051 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 187-396 |
| Cow position: | chr23:18367380-18367598 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 108, 71 |
| Conread position: | 187-565 |
| Cow position: | chr23:353894-353499 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 187-576 |
| Cow position: | chr23:10554327-10553891 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 117, 92 |
| Conread position: | 187-593 |
| Cow position: | chr23:18698342-18697893 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 83, 294 |
| Conread position: | 187-656 |
| Cow position: | chr23:22804408-22804918 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 345 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 187-662 |
| Cow position: | chr23:533917-534429 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 345 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 118, 50 |
| Conread position: | 188-306 |
| Cow position: | chr23:496914-496795 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 188-478 |
| Cow position: | chr23:8911163-8911463 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 120, 271 |
| Conread position: | 191-478 |
| Cow position: | chr23:1670606-1670903 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 113, 36 |
| Conread position: | 191-672 |
| Cow position: | chr23:36172234-36172744 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 333 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 175 |
| Conread position: | 193-306 |
| Cow position: | chr23:4529202-4529089 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 194-306 |
| Cow position: | chr23:1640502-1640614 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 198-358 |
| Cow position: | chr23:1545910-1546081 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 204-347 |
| Cow position: | chr23:13674213-13674063 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 100, 32 |
| Conread position: | 204-662 |
| Cow position: | chr23:4726503-4726994 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 104, 44 |
| Conread position: | 224-396 |
| Cow position: | chr23:2316527-2316699 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 247-648 |
| Cow position: | chr23:20195174-20194742 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 144 |
| Conread position: | 248-672 |
| Cow position: | chr23:39302460-39302906 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 296 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 202 |
| Conread position: | 249-663 |
| Cow position: | chr23:16583163-16582703 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 307 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 54, 185 |
| Conread position: | 252-662 |
| Cow position: | chr23:26795155-26794711 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 48, 148 |
| Conread position: | 290-672 |
| Cow position: | chr23:11081070-11081470 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 337-668 |
| Cow position: | chr23:9226135-9226482 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 26 |
| Conread position: | 345-667 |
| Cow position: | chr23:1189030-1188713 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 5 |
| Conread position: | 349-666 |
| Cow position: | chr23:3890693-3890366 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 62 |
| Conread position: | 349-672 |
| Cow position: | chr23:5437125-5436791 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 349-672 |
| Cow position: | chr23:5617449-5617787 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 363-662 |
| Cow position: | chr23:307343-307660 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 86, 36 |
| Conread position: | 399-656 |
| Cow position: | chr23:16780623-16780360 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 474-662 |
| Cow position: | chr23:4802976-4803165 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 476-666 |
| Cow position: | chr23:41108007-41107813 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 478-656 |
| Cow position: | chr23:32621299-32621484 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 478-662 |
| Cow position: | chr23:39813519-39813704 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 478-672 |
| Cow position: | chr23:29330323-29330522 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 480-662 |
| Cow position: | chr23:38045-38232 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 480-662 |
| Cow position: | chr23:35656429-35656611 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 138, 102 |
| Conread position: | 482-660 |
| Cow position: | chr23:28529930-28529751 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 484-656 |
| Cow position: | chr23:25933183-25933344 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 484-662 |
| Cow position: | chr23:18740192-18740013 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 484-672 |
| Cow position: | chr23:3270326-3270511 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 134, 16 |
| Conread position: | 485-632 |
| Cow position: | chr23:11369251-11369395 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 15, 96 |
| Conread position: | 485-661 |
| Cow position: | chr23:10844585-10844760 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 86, 15 |
| Conread position: | 485-672 |
| Cow position: | chr23:33434683-33434875 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 165 |
| Conread position: | 486-672 |
| Cow position: | chr23:30867275-30867087 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 488-662 |
| Cow position: | chr23:13380739-13380911 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 129, 147 |
| Conread position: | 488-664 |
| Cow position: | chr23:20557815-20557638 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 96, 91 |
| Conread position: | 489-662 |
| Cow position: | chr23:1655925-1656096 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 106 |
| Conread position: | 489-662 |
| Cow position: | chr23:9387997-9387828 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 127, 36 |
| Conread position: | 489-665 |
| Cow position: | chr23:18611734-18611558 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 129, 162 |
| Conread position: | 491-662 |
| Cow position: | chr23:2395565-2395395 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 127, 84 |
| Conread position: | 491-662 |
| Cow position: | chr23:4291387-4291559 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 491-662 |
| Cow position: | chr23:13137903-13137737 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 127, 87 |
| Conread position: | 491-672 |
| Cow position: | chr23:13410723-13410549 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 127, 51 |
| Conread position: | 493-665 |
| Cow position: | chr23:35527114-35527286 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 125, 151 |
| Conread position: | 493-672 |
| Cow position: | chr23:40348610-40348434 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 125, 89 |
| Conread position: | 496-662 |
| Cow position: | chr23:40965944-40965777 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 496-666 |
| Cow position: | chr23:32126343-32126511 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 496-668 |
| Cow position: | chr23:37948724-37948899 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 105 |
| Conread position: | 496-672 |
| Cow position: | chr23:12138047-12138219 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 125, 71 |
| Conread position: | 496-672 |
| Cow position: | chr23:23104450-23104278 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 122, 83 |
| Conread position: | 497-647 |
| Cow position: | chr23:1759285-1759434 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 121, 99 |
| Conread position: | 497-648 |
| Cow position: | chr23:24779504-24779352 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 497-649 |
| Cow position: | chr23:35718350-35718502 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 116, 57 |
| Conread position: | 497-656 |
| Cow position: | chr23:1480678-1480838 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-658 |
| Cow position: | chr23:21423806-21423964 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 80 |
| Conread position: | 497-662 |
| Cow position: | chr23:187217-187381 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 82 |
| Conread position: | 497-662 |
| Cow position: | chr23:3234743-3234574 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 497-662 |
| Cow position: | chr23:4416249-4416083 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-662 |
| Cow position: | chr23:9726503-9726337 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-662 |
| Cow position: | chr23:30617440-30617274 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 497-662 |
| Cow position: | chr23:35929989-35930150 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 497-664 |
| Cow position: | chr23:35239390-35239555 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 121, 15 |
| Conread position: | 497-672 |
| Cow position: | chr23:18739426-18739247 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 497-672 |
| Cow position: | chr23:40737980-40737803 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 499-666 |
| Cow position: | chr23:164800-164960 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 499-668 |
| Cow position: | chr23:33232661-33232492 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 61 |
| Conread position: | 500-666 |
| Cow position: | chr23:13836761-13836929 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 502-662 |
| Cow position: | chr23:4521841-4521679 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 507-662 |
| Cow position: | chr23:799620-799464 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 508-672 |
| Cow position: | chr23:6672586-6672415 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.