Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8041D21.3 |
| Conread position: | 98-189 |
| Cow position: | chr24:29180664-29180575 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 164-279 |
| Cow position: | chr24:29073042-29072927 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-277 |
| Cow position: | chr24:13117618-13117711 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-277 |
| Cow position: | chr24:6080458-6080550 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 78 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-277 |
| Cow position: | chr24:39216969-39216877 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-283 |
| Cow position: | chr24:16897184-16897087 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-293 |
| Cow position: | chr24:9070779-9070671 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-297 |
| Cow position: | chr24:6160428-6160316 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-297 |
| Cow position: | chr24:32456084-32456194 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 185-297 |
| Cow position: | chr24:32609294-32609406 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-297 |
| Cow position: | chr24:33379711-33379823 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-302 |
| Cow position: | chr24:20225393-20225510 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-303 |
| Cow position: | chr24:23616351-23616468 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:3631173-3631294 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:14279543-14279665 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:15666754-15666632 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:19658203-19658325 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:27543820-27543699 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:27754352-27754471 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 185-306 |
| Cow position: | chr24:28353815-28353928 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:33238893-33238771 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:33621830-33621709 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:36710796-36710917 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr24:37205220-37205102 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 185-309 |
| Cow position: | chr24:39219190-39219067 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-346 |
| Cow position: | chr24:16541188-16541025 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 185-352 |
| Cow position: | chr24:6141300-6141126 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 185-352 |
| Cow position: | chr24:29180557-29180722 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-352 |
| Cow position: | chr24:32360872-32360690 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 185-352 |
| Cow position: | chr24:35572143-35572322 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 120, 73 |
| Conread position: | 185-352 |
| Cow position: | chr24:36722387-36722559 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 185-353 |
| Cow position: | chr24:19466277-19466095 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 120, 106 |
| Conread position: | 185-353 |
| Cow position: | chr24:29360322-29360162 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-353 |
| Cow position: | chr24:37975413-37975236 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 185-357 |
| Cow position: | chr24:13625945-13626121 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 185-358 |
| Cow position: | chr24:5754497-5754678 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 185-358 |
| Cow position: | chr24:20874336-20874520 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 26 |
| Conread position: | 185-358 |
| Cow position: | chr24:23556672-23556487 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 34 |
| Conread position: | 185-358 |
| Cow position: | chr24:33098831-33098652 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 63 |
| Conread position: | 185-369 |
| Cow position: | chr24:21264850-21264660 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 185-369 |
| Cow position: | chr24:31302676-31302865 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 185-369 |
| Cow position: | chr24:39483132-39483328 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 185-396 |
| Cow position: | chr24:20024263-20024490 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 185-396 |
| Cow position: | chr24:25320648-25320870 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 185-396 |
| Cow position: | chr24:28062602-28062826 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 185-403 |
| Cow position: | chr24:6340673-6340897 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 123, 181 |
| Conread position: | 185-439 |
| Cow position: | chr24:814606-814331 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 119, 45 |
| Conread position: | 185-440 |
| Cow position: | chr24:27270452-27270724 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 185-446 |
| Cow position: | chr24:10308933-10309207 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 133, 45 |
| Conread position: | 185-467 |
| Cow position: | chr24:18405648-18405347 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 110, 89 |
| Conread position: | 185-478 |
| Cow position: | chr24:36555172-36554859 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 119, 85 |
| Conread position: | 185-565 |
| Cow position: | chr24:24250380-24250802 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 185-573 |
| Cow position: | chr24:29673175-29673609 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 120, 410 |
| Conread position: | 185-604 |
| Cow position: | chr24:31309080-31309512 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 150, 45 |
| Conread position: | 185-625 |
| Cow position: | chr24:32054327-32054791 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 180 |
| Conread position: | 185-633 |
| Cow position: | chr24:24002634-24003100 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 119, 100 |
| Conread position: | 185-648 |
| Cow position: | chr24:18741913-18741404 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 334 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 185-648 |
| Cow position: | chr24:44987718-44987211 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 289 |
| Conread position: | 185-656 |
| Cow position: | chr24:17104908-17104403 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 337 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 185-656 |
| Cow position: | chr24:28553890-28553403 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 92 |
| Conread position: | 185-661 |
| Cow position: | chr24:39850221-39849718 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 332 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 86, 297 |
| Conread position: | 185-662 |
| Cow position: | chr24:3493550-3494056 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 185-662 |
| Cow position: | chr24:17309447-17308966 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 117, 266 |
| Conread position: | 185-662 |
| Cow position: | chr24:18485344-18484816 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 296 |
| Conread position: | 185-662 |
| Cow position: | chr24:28690350-28690861 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 259 |
| Conread position: | 185-666 |
| Cow position: | chr24:27149063-27149563 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 340 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 104, 55 |
| Conread position: | 185-668 |
| Cow position: | chr24:12851394-12851886 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 322 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 186-306 |
| Cow position: | chr24:2391848-2391968 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-306 |
| Cow position: | chr24:21252793-21252673 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-306 |
| Cow position: | chr24:43506856-43506738 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 186-352 |
| Cow position: | chr24:25664787-25664960 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 186-353 |
| Cow position: | chr24:39289673-39289847 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 186-358 |
| Cow position: | chr24:4616089-4615908 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 110, 154 |
| Conread position: | 186-358 |
| Cow position: | chr24:11839837-11840018 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 186-358 |
| Cow position: | chr24:15288514-15288701 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 186-358 |
| Cow position: | chr24:16625844-16625661 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 186-358 |
| Cow position: | chr24:30235535-30235713 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 186-440 |
| Cow position: | chr24:38347336-38347625 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 283 |
| Conread position: | 186-662 |
| Cow position: | chr24:38814631-38815149 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 338 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 118, 44 |
| Conread position: | 186-666 |
| Cow position: | chr24:32205139-32204607 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 349 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 524 |
| Conread position: | 187-302 |
| Cow position: | chr24:38479306-38479195 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 187-306 |
| Cow position: | chr24:34272460-34272579 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-396 |
| Cow position: | chr24:22193383-22193605 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 199 |
| Conread position: | 187-436 |
| Cow position: | chr24:20970134-20969862 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 187-564 |
| Cow position: | chr24:28689366-28689747 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 187-572 |
| Cow position: | chr24:44054484-44054081 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 118, 178 |
| Conread position: | 187-646 |
| Cow position: | chr24:27267296-27267772 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 322 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 187-666 |
| Cow position: | chr24:27844862-27844354 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 344 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 121, 265 |
| Conread position: | 188-352 |
| Cow position: | chr24:39159885-39159712 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 188-574 |
| Cow position: | chr24:32370252-32369826 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 83, 194 |
| Conread position: | 188-662 |
| Cow position: | chr24:27906087-27906613 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 359 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 82, 212 |
| Conread position: | 188-672 |
| Cow position: | chr24:28303691-28303178 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 340 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 91 |
| Conread position: | 189-306 |
| Cow position: | chr24:38655432-38655315 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-565 |
| Cow position: | chr24:28319543-28319129 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 193-351 |
| Cow position: | chr24:33153449-33153615 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 36 |
| Conread position: | 193-407 |
| Cow position: | chr24:3663849-3664057 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 177, 94 |
| Conread position: | 198-306 |
| Cow position: | chr24:18266503-18266395 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 198-358 |
| Cow position: | chr24:20988330-20988162 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 107, 5 |
| Conread position: | 199-396 |
| Cow position: | chr24:34315029-34315228 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 37 |
| Conread position: | 202-306 |
| Cow position: | chr24:40908689-40908793 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-597 |
| Cow position: | chr24:18970807-18970397 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 221-634 |
| Cow position: | chr24:43683765-43683313 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 303 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 12, 64 |
| Conread position: | 241-606 |
| Cow position: | chr24:18331448-18331842 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 136 |
| Conread position: | 252-641 |
| Cow position: | chr24:17294464-17294040 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 133 |
| Conread position: | 313-664 |
| Cow position: | chr24:10299887-10300256 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 95 |
| Conread position: | 335-662 |
| Cow position: | chr24:38006874-38006537 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 349-662 |
| Cow position: | chr24:19186808-19187107 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 399-662 |
| Cow position: | chr24:39523547-39523275 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 191 |
| Conread position: | 411-662 |
| Cow position: | chr24:25971140-25970909 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 207, 21 |
| Conread position: | 418-648 |
| Cow position: | chr24:18810762-18810995 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 465-662 |
| Cow position: | chr24:28787831-28788033 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 476-672 |
| Cow position: | chr24:27220103-27219904 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 478-662 |
| Cow position: | chr24:12120885-12121074 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 478-662 |
| Cow position: | chr24:22079452-22079638 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 478-662 |
| Cow position: | chr24:29586989-29587175 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 478-666 |
| Cow position: | chr24:2261656-2261849 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 480-659 |
| Cow position: | chr24:4635177-4634993 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 480-661 |
| Cow position: | chr24:18695870-18696056 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 480-661 |
| Cow position: | chr24:41566104-41565926 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 138, 52 |
| Conread position: | 480-663 |
| Cow position: | chr24:27553086-27553276 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 480-665 |
| Cow position: | chr24:21606682-21606498 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 480-666 |
| Cow position: | chr24:161994-162186 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 484-662 |
| Cow position: | chr24:18702398-18702575 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 134, 5 |
| Conread position: | 486-648 |
| Cow position: | chr24:27270923-27271090 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 486-667 |
| Cow position: | chr24:19623852-19624045 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 487-666 |
| Cow position: | chr24:25947860-25947680 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 488-662 |
| Cow position: | chr24:36554695-36554526 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 130, 91 |
| Conread position: | 488-662 |
| Cow position: | chr24:39911030-39910856 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 61 |
| Conread position: | 489-662 |
| Cow position: | chr24:9300631-9300805 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 63 |
| Conread position: | 489-664 |
| Cow position: | chr24:250534-250356 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 489-672 |
| Cow position: | chr24:11836400-11836216 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 491-662 |
| Cow position: | chr24:29677910-29677734 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 491-664 |
| Cow position: | chr24:885436-885268 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 127, 24 |
| Conread position: | 491-665 |
| Cow position: | chr24:27066236-27066409 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 127, 33 |
| Conread position: | 491-666 |
| Cow position: | chr24:22419966-22420142 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 127, 153 |
| Conread position: | 491-668 |
| Cow position: | chr24:20801340-20801164 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 127, 76 |
| Conread position: | 491-668 |
| Cow position: | chr24:26001393-26001568 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 127, 84 |
| Conread position: | 491-668 |
| Cow position: | chr24:42984397-42984576 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 491-671 |
| Cow position: | chr24:16994887-16995062 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 126, 87 |
| Conread position: | 491-672 |
| Cow position: | chr24:20017422-20017240 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 492-656 |
| Cow position: | chr24:2992874-2992711 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 126, 60 |
| Conread position: | 496-651 |
| Cow position: | chr24:11736060-11735906 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 122, 71 |
| Conread position: | 496-666 |
| Cow position: | chr24:25142620-25142796 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 497-649 |
| Cow position: | chr24:32230494-32230342 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 78 |
| Conread position: | 497-653 |
| Cow position: | chr24:26588232-26588384 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 121, 77 |
| Conread position: | 497-656 |
| Cow position: | chr24:5152535-5152695 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-662 |
| Cow position: | chr24:390115-390275 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 70 |
| Conread position: | 497-662 |
| Cow position: | chr24:11028677-11028512 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 67 |
| Conread position: | 497-662 |
| Cow position: | chr24:32891032-32890870 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 82 |
| Conread position: | 497-662 |
| Cow position: | chr24:37252169-37252332 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 81 |
| Conread position: | 497-666 |
| Cow position: | chr24:23046886-23046715 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 497-666 |
| Cow position: | chr24:30235882-30236051 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 78 |
| Conread position: | 497-668 |
| Cow position: | chr24:30325772-30325601 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 86 |
| Conread position: | 497-671 |
| Cow position: | chr24:14373570-14373393 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 497-672 |
| Cow position: | chr24:34272822-34273003 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 177 |
| Conread position: | 498-662 |
| Cow position: | chr24:36286582-36286744 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 120, 77 |
| Conread position: | 499-662 |
| Cow position: | chr24:18750721-18750885 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 500-672 |
| Cow position: | chr24:18874806-18874635 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 118, 56 |
| Conread position: | 505-672 |
| Cow position: | chr24:16640930-16641098 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 505-672 |
| Cow position: | chr24:38428093-38427925 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 532-666 |
| Cow position: | chr24:35210101-35210237 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.