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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8041D21.3
        

               
Conread position:
               
149-474
               

               
Cow position:
               
chr27:27896936-27897255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
186, 16
               

               
Conread position:
               
180-346
               

               
Cow position:
               
chr27:22035092-22035273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
185-277
               

               
Cow position:
               
chr27:22655101-22655193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-279
               

               
Cow position:
               
chr27:28984665-28984759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-282
               

               
Cow position:
               
chr27:14633114-14633018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
185-297
               

               
Cow position:
               
chr27:16984063-16983951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-300
               

               
Cow position:
               
chr27:7971846-7971731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-303
               

               
Cow position:
               
chr27:23595546-23595431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
185-303
               

               
Cow position:
               
chr27:24999460-24999576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
185-306
               

               
Cow position:
               
chr27:299107-299228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-306
               

               
Cow position:
               
chr27:1903339-1903218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
185-306
               

               
Cow position:
               
chr27:12191173-12191294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-306
               

               
Cow position:
               
chr27:15454489-15454367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
185-306
               

               
Cow position:
               
chr27:21350739-21350860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-306
               

               
Cow position:
               
chr27:26313923-26314042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
185-346
               

               
Cow position:
               
chr27:30417950-30417784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
185-347
               

               
Cow position:
               
chr27:13843480-13843312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
185-351
               

               
Cow position:
               
chr27:14670105-14670285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
185-352
               

               
Cow position:
               
chr27:4881884-4881702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
185-352
               

               
Cow position:
               
chr27:4983325-4983507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
185-352
               

               
Cow position:
               
chr27:9988983-9988808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
185-352
               

               
Cow position:
               
chr27:13902018-13902200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
185-352
               

               
Cow position:
               
chr27:18544274-18544092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
185-352
               

               
Cow position:
               
chr27:23511395-23511216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
185-353
               

               
Cow position:
               
chr27:1123294-1123128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
185-353
               

               
Cow position:
               
chr27:26856935-26857097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
185-354
               

               
Cow position:
               
chr27:27737657-27737829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr27:815641-815458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr27:6074192-6074013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr27:7212446-7212625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr27:7958559-7958741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 151
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr27:9978102-9977920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 46
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr27:18922726-18922543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
116, 85
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr27:24477676-24477505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 97
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr27:26785706-26785883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
133, 62
               

               
Conread position:
               
185-358
               

               
Cow position:
               
chr27:27449161-27449341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
185-369
               

               
Cow position:
               
chr27:7289833-7290026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
123, 155
               

               
Conread position:
               
185-369
               

               
Cow position:
               
chr27:13182407-13182221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
185-369
               

               
Cow position:
               
chr27:17476319-17476133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr27:15342856-15343068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
185-396
               

               
Cow position:
               
chr27:15871438-15871218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 203
               

               
Conread position:
               
185-396
               

               
Cow position:
               
chr27:24227517-24227740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
122, 186
               

               
Conread position:
               
185-468
               

               
Cow position:
               
chr27:11255789-11255485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 272
               

               
Conread position:
               
185-477
               

               
Cow position:
               
chr27:8961993-8962296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 209
               

               
Conread position:
               
185-477
               

               
Cow position:
               
chr27:23502737-23502447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
178, 52
               

               
Conread position:
               
185-478
               

               
Cow position:
               
chr27:15867663-15867354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
117, 75
               

               
Conread position:
               
185-478
               

               
Cow position:
               
chr27:30362519-30362204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
116, 204
               

               
Conread position:
               
185-530
               

               
Cow position:
               
chr27:9090525-9090903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
185-563
               

               
Cow position:
               
chr27:17645922-17646314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
180, 121
               

               
Conread position:
               
185-565
               

               
Cow position:
               
chr27:30177292-30177699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
44, 313
               

               
Conread position:
               
185-573
               

               
Cow position:
               
chr27:26581170-26581592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
185-594
               

               
Cow position:
               
chr27:4385789-4386238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
185-595
               

               
Cow position:
               
chr27:6674511-6674103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
185-637
               

               
Cow position:
               
chr27:15925611-15925124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
185-657
               

               
Cow position:
               
chr27:26427852-26428366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 281
               

               
Conread position:
               
185-658
               

               
Cow position:
               
chr27:24445880-24446376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
119, 284
               

               
Conread position:
               
185-662
               

               
Cow position:
               
chr27:16513606-16514092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
185-662
               

               
Cow position:
               
chr27:22440418-22439894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
86, 168
               

               
Conread position:
               
185-662
               

               
Cow position:
               
chr27:27019827-27020338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
185-662
               

               
Cow position:
               
chr27:29831412-29831951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
185-662
               

               
Cow position:
               
chr27:30868464-30868994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
119, 85
               

               
Conread position:
               
185-665
               

               
Cow position:
               
chr27:15315765-15315277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
185-666
               

               
Cow position:
               
chr27:11435056-11435574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
185-668
               

               
Cow position:
               
chr27:21977861-21978392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 282
               

               
Conread position:
               
185-672
               

               
Cow position:
               
chr27:22549506-22550023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
186-306
               

               
Cow position:
               
chr27:29400092-29399974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
186-352
               

               
Cow position:
               
chr27:27521729-27521910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
186-353
               

               
Cow position:
               
chr27:12240041-12240219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr27:15866496-15866305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 68
               

               
Conread position:
               
186-396
               

               
Cow position:
               
chr27:15272181-15271965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 203
               

               
Conread position:
               
186-396
               

               
Cow position:
               
chr27:20641068-20641283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 183
               

               
Conread position:
               
186-452
               

               
Cow position:
               
chr27:26919638-26919924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
186-630
               

               
Cow position:
               
chr27:1768363-1768833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
119, 51
               

               
Conread position:
               
186-656
               

               
Cow position:
               
chr27:28189942-28190428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
115, 284
               

               
Conread position:
               
186-661
               

               
Cow position:
               
chr27:27606069-27606536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
118, 153
               

               
Conread position:
               
186-662
               

               
Cow position:
               
chr27:23128729-23128222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
187-299
               

               
Cow position:
               
chr27:1173269-1173381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
187-303
               

               
Cow position:
               
chr27:26653579-26653463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
187-351
               

               
Cow position:
               
chr27:28207072-28206893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
187-358
               

               
Cow position:
               
chr27:15858817-15858998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
187-358
               

               
Cow position:
               
chr27:21408274-21408464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
187-455
               

               
Cow position:
               
chr27:8291736-8292025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 271
               

               
Conread position:
               
187-478
               

               
Cow position:
               
chr27:23070089-23070401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
188-306
               

               
Cow position:
               
chr27:15927045-15926927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
188-306
               

               
Cow position:
               
chr27:25411242-25411364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
188-353
               

               
Cow position:
               
chr27:2900968-2901144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
188-353
               

               
Cow position:
               
chr27:30677172-30677007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
188-461
               

               
Cow position:
               
chr27:16238169-16237883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
82, 123
               

               
Conread position:
               
188-656
               

               
Cow position:
               
chr27:13876001-13875496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
188-662
               

               
Cow position:
               
chr27:25809250-25809759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
189-306
               

               
Cow position:
               
chr27:12429684-12429564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
190-297
               

               
Cow position:
               
chr27:11422557-11422665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
192-671
               

               
Cow position:
               
chr27:31372711-31373224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
194-369
               

               
Cow position:
               
chr27:28931523-28931710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
195-624
               

               
Cow position:
               
chr27:6550717-6550250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
108, 188
               

               
Conread position:
               
196-354
               

               
Cow position:
               
chr27:20092352-20092521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
197-668
               

               
Cow position:
               
chr27:18507896-18507396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
108, 170
               

               
Conread position:
               
198-306
               

               
Cow position:
               
chr27:2957667-2957563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
203-672
               

               
Cow position:
               
chr27:28921641-28922148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
204-672
               

               
Cow position:
               
chr27:26508904-26509410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 255
               

               
Conread position:
               
208-668
               

               
Cow position:
               
chr27:12516450-12515945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
217-672
               

               
Cow position:
               
chr27:28518529-28518043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
219-662
               

               
Cow position:
               
chr27:10980106-10979617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
86, 246
               

               
Conread position:
               
247-671
               

               
Cow position:
               
chr27:30765246-30764780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 323
               

               
Conread position:
               
263-666
               

               
Cow position:
               
chr27:30915200-30914759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
316-662
               

               
Cow position:
               
chr27:26087413-26087077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
329-665
               

               
Cow position:
               
chr27:18558471-18558112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
348-648
               

               
Cow position:
               
chr27:26188908-26188598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
349-648
               

               
Cow position:
               
chr27:23554239-23554558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 189
               

               
Conread position:
               
349-663
               

               
Cow position:
               
chr27:28896959-28896632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
349-672
               

               
Cow position:
               
chr27:26226204-26226540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 219
               

               
Conread position:
               
363-662
               

               
Cow position:
               
chr27:6925162-6924839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
380-647
               

               
Cow position:
               
chr27:19660987-19660700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
388-666
               

               
Cow position:
               
chr27:26793744-26794031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
392-666
               

               
Cow position:
               
chr27:16965612-16965327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
476-662
               

               
Cow position:
               
chr27:21991091-21990900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
478-662
               

               
Cow position:
               
chr27:26245604-26245789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
478-672
               

               
Cow position:
               
chr27:27740348-27740546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
480-660
               

               
Cow position:
               
chr27:29308284-29308102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
480-662
               

               
Cow position:
               
chr27:10323778-10323601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
138, 60
               

               
Conread position:
               
480-663
               

               
Cow position:
               
chr27:16103748-16103567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 56
               

               
Conread position:
               
480-666
               

               
Cow position:
               
chr27:20048575-20048388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
480-672
               

               
Cow position:
               
chr27:28015794-28015988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
480-672
               

               
Cow position:
               
chr27:31498720-31498530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
92, 77
               

               
Conread position:
               
485-662
               

               
Cow position:
               
chr27:29246215-29246387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
485-665
               

               
Cow position:
               
chr27:9504489-9504307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
485-666
               

               
Cow position:
               
chr27:27827914-27828103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
489-662
               

               
Cow position:
               
chr27:26980034-26980208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 90
               

               
Conread position:
               
489-667
               

               
Cow position:
               
chr27:8062422-8062600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
491-640
               

               
Cow position:
               
chr27:24709483-24709333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 88
               

               
Conread position:
               
491-648
               

               
Cow position:
               
chr27:13318048-13318206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
491-661
               

               
Cow position:
               
chr27:18791583-18791756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
491-662
               

               
Cow position:
               
chr27:7412319-7412150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
491-665
               

               
Cow position:
               
chr27:30455920-30455747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
126, 108
               

               
Conread position:
               
491-666
               

               
Cow position:
               
chr27:11982720-11982895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
491-668
               

               
Cow position:
               
chr27:11480710-11480887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 109
               

               
Conread position:
               
491-668
               

               
Cow position:
               
chr27:29249518-29249336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
495-666
               

               
Cow position:
               
chr27:2036642-2036479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
496-663
               

               
Cow position:
               
chr27:19452923-19452755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
496-665
               

               
Cow position:
               
chr27:9956510-9956680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
496-666
               

               
Cow position:
               
chr27:27438585-27438755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
497-644
               

               
Cow position:
               
chr27:23060193-23060341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
497-648
               

               
Cow position:
               
chr27:232474-232322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
497-648
               

               
Cow position:
               
chr27:26909671-26909817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
497-651
               

               
Cow position:
               
chr27:17908339-17908494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr27:21951058-21951217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr27:11993946-11994107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
153, 120
               

               
Conread position:
               
497-658
               

               
Cow position:
               
chr27:16705171-16705014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
121, 94
               

               
Conread position:
               
497-660
               

               
Cow position:
               
chr27:18435213-18435371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
497-661
               

               
Cow position:
               
chr27:26111995-26112160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
497-662
               

               
Cow position:
               
chr27:426890-426727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 78
               

               
Conread position:
               
497-662
               

               
Cow position:
               
chr27:1353503-1353338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
121, 154
               

               
Conread position:
               
497-662
               

               
Cow position:
               
chr27:11528851-11528686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 100
               

               
Conread position:
               
497-662
               

               
Cow position:
               
chr27:20612444-20612278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
497-662
               

               
Cow position:
               
chr27:22583667-22583500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
497-662
               

               
Cow position:
               
chr27:26118420-26118254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
497-662
               

               
Cow position:
               
chr27:26121680-26121515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
497-662
               

               
Cow position:
               
chr27:26236246-26236087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
497-662
               

               
Cow position:
               
chr27:26437201-26437363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
75, 85
               

               
Conread position:
               
497-666
               

               
Cow position:
               
chr27:2592462-2592288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
497-666
               

               
Cow position:
               
chr27:5553390-5553223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
163, 120
               

               
Conread position:
               
497-672
               

               
Cow position:
               
chr27:10581453-10581281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
497-672
               

               
Cow position:
               
chr27:17397534-17397704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
497-672
               

               
Cow position:
               
chr27:28931881-28932057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
121, 80
               

               
Conread position:
               
499-662
               

               
Cow position:
               
chr27:24303865-24303700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 139
               

               
Conread position:
               
500-662
               

               
Cow position:
               
chr27:19074105-19074266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
500-672
               

               
Cow position:
               
chr27:19779794-19779625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
118, 75
               

               
Conread position:
               
500-672
               

               
Cow position:
               
chr27:28254155-28253983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
506-653
               

               
Cow position:
               
chr27:26154232-26154083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
508-668
               

               
Cow position:
               
chr27:26467650-26467810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
512-672
               

               
Cow position:
               
chr27:21054365-21054204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
515-672
               

               
Cow position:
               
chr27:16275777-16275933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
515-672
               

               
Cow position:
               
chr27:27012601-27012441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               
Show alignments to all cow chromosomes.