Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8041D21.3 |
| Conread position: | 164-303 |
| Cow position: | chr29:37617813-37617946 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 165-306 |
| Cow position: | chr29:15944228-15944369 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 165-396 |
| Cow position: | chr29:465740-465497 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 167-396 |
| Cow position: | chr29:16657352-16657587 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 108, 201 |
| Conread position: | 180-306 |
| Cow position: | chr29:15289414-15289540 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-561 |
| Cow position: | chr29:39567364-39567780 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 185-293 |
| Cow position: | chr29:13017711-13017603 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-297 |
| Cow position: | chr29:38910325-38910213 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-298 |
| Cow position: | chr29:28503772-28503884 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-300 |
| Cow position: | chr29:20674129-20674011 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 185-301 |
| Cow position: | chr29:20429290-20429178 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 185-302 |
| Cow position: | chr29:13372345-13372459 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 185-302 |
| Cow position: | chr29:21196971-21196855 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-302 |
| Cow position: | chr29:38581648-38581763 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-304 |
| Cow position: | chr29:29632258-29632139 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:4875224-4875103 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:7560722-7560601 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:15940959-15940838 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:17543129-17543250 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:23240192-23240312 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:24345785-24345664 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:30028752-30028631 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:35434549-35434670 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:35484923-35485044 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-306 |
| Cow position: | chr29:35630734-35630615 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 185-306 |
| Cow position: | chr29:36192989-36192868 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-330 |
| Cow position: | chr29:28883759-28883904 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 136, 120 |
| Conread position: | 185-345 |
| Cow position: | chr29:44902023-44901852 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 185-347 |
| Cow position: | chr29:17409013-17409186 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 54 |
| Conread position: | 185-348 |
| Cow position: | chr29:4327174-4327344 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 185-351 |
| Cow position: | chr29:13101820-13101988 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 185-352 |
| Cow position: | chr29:528611-528429 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 185-352 |
| Cow position: | chr29:1307185-1307007 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 185-352 |
| Cow position: | chr29:9638633-9638456 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 119, 175 |
| Conread position: | 185-352 |
| Cow position: | chr29:18781545-18781722 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 158 |
| Conread position: | 185-352 |
| Cow position: | chr29:23119698-23119520 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 185-352 |
| Cow position: | chr29:28621591-28621419 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 99, 59 |
| Conread position: | 185-352 |
| Cow position: | chr29:34793655-34793475 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 185-353 |
| Cow position: | chr29:2744593-2744414 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 185-353 |
| Cow position: | chr29:4480495-4480314 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 185-358 |
| Cow position: | chr29:21528981-21529149 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 123, 44 |
| Conread position: | 185-358 |
| Cow position: | chr29:26017832-26017647 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 185-358 |
| Cow position: | chr29:28868310-28868499 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 185-358 |
| Cow position: | chr29:29066106-29066289 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 120, 27 |
| Conread position: | 185-363 |
| Cow position: | chr29:45005937-45005755 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 89 |
| Conread position: | 185-365 |
| Cow position: | chr29:32308645-32308453 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 185-369 |
| Cow position: | chr29:13127431-13127248 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 122 |
| Conread position: | 185-369 |
| Cow position: | chr29:36356533-36356722 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 120, 40 |
| Conread position: | 185-380 |
| Cow position: | chr29:21592382-21592583 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 8, 175 |
| Conread position: | 185-380 |
| Cow position: | chr29:35077042-35077248 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 185-393 |
| Cow position: | chr29:13108017-13108233 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 185-396 |
| Cow position: | chr29:7666350-7666128 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 83 |
| Conread position: | 185-400 |
| Cow position: | chr29:10058848-10058635 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 139, 188 |
| Conread position: | 185-404 |
| Cow position: | chr29:6014776-6015016 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 185-441 |
| Cow position: | chr29:6925701-6925976 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 185-441 |
| Cow position: | chr29:31926611-31926324 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 205 |
| Conread position: | 185-466 |
| Cow position: | chr29:26263534-26263824 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 118, 75 |
| Conread position: | 185-468 |
| Cow position: | chr29:9686330-9686012 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 45, 295 |
| Conread position: | 185-573 |
| Cow position: | chr29:10156610-10156196 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 123, 85 |
| Conread position: | 185-577 |
| Cow position: | chr29:22935963-22936385 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 185-633 |
| Cow position: | chr29:87334-86835 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 84, 28 |
| Conread position: | 185-634 |
| Cow position: | chr29:961599-962075 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 185-648 |
| Cow position: | chr29:16609419-16609934 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 346 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 120, 30 |
| Conread position: | 185-654 |
| Cow position: | chr29:24952365-24952877 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 336 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 185-660 |
| Cow position: | chr29:16175592-16175109 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 277 |
| Conread position: | 185-661 |
| Cow position: | chr29:6635783-6636275 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 114, 197 |
| Conread position: | 185-662 |
| Cow position: | chr29:7041154-7040670 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 321 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 185-662 |
| Cow position: | chr29:19125039-19125528 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 335 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 138, 94 |
| Conread position: | 185-662 |
| Cow position: | chr29:23874136-23874660 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 354 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 185-662 |
| Cow position: | chr29:32800028-32799505 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 289 |
| Conread position: | 185-662 |
| Cow position: | chr29:35291777-35292284 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 335 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 121 |
| Conread position: | 185-666 |
| Cow position: | chr29:4120531-4121058 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 45 |
| Conread position: | 185-666 |
| Cow position: | chr29:35281182-35281674 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 350 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 123, 91 |
| Conread position: | 185-668 |
| Cow position: | chr29:34745975-34745456 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 356 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 118, 85 |
| Conread position: | 185-672 |
| Cow position: | chr29:20626256-20626778 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 349 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 123, 85 |
| Conread position: | 186-306 |
| Cow position: | chr29:11136208-11136089 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 186-306 |
| Cow position: | chr29:28689290-28689410 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-358 |
| Cow position: | chr29:686511-686329 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 119, 83 |
| Conread position: | 186-400 |
| Cow position: | chr29:17607096-17607321 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 118, 184 |
| Conread position: | 186-400 |
| Cow position: | chr29:40903039-40902819 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 117, 94 |
| Conread position: | 186-668 |
| Cow position: | chr29:29056863-29057385 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 424 |
| Conread position: | 187-303 |
| Cow position: | chr29:5977440-5977324 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-306 |
| Cow position: | chr29:15738663-15738545 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 187-306 |
| Cow position: | chr29:19756129-19756248 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-306 |
| Cow position: | chr29:29589233-29589117 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 187-307 |
| Cow position: | chr29:4084747-4084867 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-353 |
| Cow position: | chr29:36530545-36530725 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 115, 8 |
| Conread position: | 187-630 |
| Cow position: | chr29:21443663-21443170 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 332 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 188-299 |
| Cow position: | chr29:44233267-44233156 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-303 |
| Cow position: | chr29:5948105-5947990 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-306 |
| Cow position: | chr29:9332826-9332944 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-358 |
| Cow position: | chr29:2071886-2071707 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 111, 87 |
| Conread position: | 188-365 |
| Cow position: | chr29:26559835-26559655 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 113, 49 |
| Conread position: | 188-370 |
| Cow position: | chr29:29974726-29974919 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 117, 23 |
| Conread position: | 188-440 |
| Cow position: | chr29:12798614-12798883 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 107, 58 |
| Conread position: | 188-561 |
| Cow position: | chr29:6293782-6293381 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 112, 38 |
| Conread position: | 188-668 |
| Cow position: | chr29:9709381-9709897 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 343 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 189-303 |
| Cow position: | chr29:12005081-12004968 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 189-306 |
| Cow position: | chr29:4328117-4328233 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 189-306 |
| Cow position: | chr29:7408206-7408089 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 189-396 |
| Cow position: | chr29:26519778-26519564 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 189-668 |
| Cow position: | chr29:17109655-17110157 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 335 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 191-347 |
| Cow position: | chr29:856718-856562 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 127, 79 |
| Conread position: | 200-641 |
| Cow position: | chr29:4625299-4624819 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 314 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 104, 256 |
| Conread position: | 201-369 |
| Cow position: | chr29:26734728-26734905 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 228-407 |
| Cow position: | chr29:34360072-34359894 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 135 |
| Conread position: | 241-469 |
| Cow position: | chr29:30367288-30367068 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 241-662 |
| Cow position: | chr29:41530585-41531049 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 248-577 |
| Cow position: | chr29:707203-706843 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 161 |
| Conread position: | 254-654 |
| Cow position: | chr29:13028205-13028640 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 118, 57 |
| Conread position: | 262-553 |
| Cow position: | chr29:10235359-10235044 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 125 |
| Conread position: | 269-665 |
| Cow position: | chr29:24292637-24293071 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 336 |
| Conread position: | 309-668 |
| Cow position: | chr29:30440743-30441141 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 317-662 |
| Cow position: | chr29:3711212-3711574 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 150 |
| Conread position: | 345-667 |
| Cow position: | chr29:12025605-12025271 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 345-668 |
| Cow position: | chr29:30227409-30227075 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 45, 198 |
| Conread position: | 349-640 |
| Cow position: | chr29:8669236-8669531 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 351-672 |
| Cow position: | chr29:17222284-17222625 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 360-672 |
| Cow position: | chr29:22068867-22068532 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 411-662 |
| Cow position: | chr29:18450200-18449940 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 36, 173 |
| Conread position: | 417-672 |
| Cow position: | chr29:1011633-1011385 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 476-672 |
| Cow position: | chr29:20685178-20685379 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 477-659 |
| Cow position: | chr29:30294855-30294676 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 141, 25 |
| Conread position: | 480-648 |
| Cow position: | chr29:18878468-18878298 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 21, 159 |
| Conread position: | 480-668 |
| Cow position: | chr29:24188052-24187859 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 480-672 |
| Cow position: | chr29:396426-396610 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 485-665 |
| Cow position: | chr29:33321369-33321550 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 485-668 |
| Cow position: | chr29:19949328-19949509 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 486-656 |
| Cow position: | chr29:37618329-37618500 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 487-656 |
| Cow position: | chr29:41422887-41422717 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 489-646 |
| Cow position: | chr29:43088333-43088488 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 490-658 |
| Cow position: | chr29:32656460-32656630 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 491-659 |
| Cow position: | chr29:3292976-3293138 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 127, 69 |
| Conread position: | 491-662 |
| Cow position: | chr29:16200450-16200278 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 491-662 |
| Cow position: | chr29:19363739-19363906 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 127, 16 |
| Conread position: | 491-662 |
| Cow position: | chr29:20167452-20167621 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 76, 135 |
| Conread position: | 491-668 |
| Cow position: | chr29:35084194-35084019 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 127, 76 |
| Conread position: | 491-672 |
| Cow position: | chr29:4441176-4440997 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 127, 50 |
| Conread position: | 491-672 |
| Cow position: | chr29:5046681-5046861 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 145 |
| Conread position: | 491-672 |
| Cow position: | chr29:31489347-31489532 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 491-672 |
| Cow position: | chr29:35259013-35259191 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 127, 86 |
| Conread position: | 493-672 |
| Cow position: | chr29:4648179-4648003 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 85 |
| Conread position: | 493-672 |
| Cow position: | chr29:23142304-23142124 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 496-662 |
| Cow position: | chr29:2219420-2219586 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 122, 83 |
| Conread position: | 496-662 |
| Cow position: | chr29:16735257-16735424 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 496-671 |
| Cow position: | chr29:42404980-42405156 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 497-648 |
| Cow position: | chr29:26017468-26017316 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-648 |
| Cow position: | chr29:35677509-35677357 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-662 |
| Cow position: | chr29:501231-501398 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 164 |
| Conread position: | 497-662 |
| Cow position: | chr29:14576893-14577055 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 70 |
| Conread position: | 497-662 |
| Cow position: | chr29:17297170-17297336 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-662 |
| Cow position: | chr29:22577145-22576980 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 78 |
| Conread position: | 497-664 |
| Cow position: | chr29:8163795-8163627 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-665 |
| Cow position: | chr29:5520451-5520283 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 497-666 |
| Cow position: | chr29:11894732-11894904 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-667 |
| Cow position: | chr29:15947201-15947372 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 497-672 |
| Cow position: | chr29:38732187-38732363 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 499-662 |
| Cow position: | chr29:28420791-28420955 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 500-672 |
| Cow position: | chr29:22019150-22018978 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 67 |
| Conread position: | 500-672 |
| Cow position: | chr29:24604933-24605104 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 80 |
| Conread position: | 502-667 |
| Cow position: | chr29:30920364-30920197 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 506-663 |
| Cow position: | chr29:36357169-36357327 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 508-662 |
| Cow position: | chr29:41094162-41094314 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 110, 127 |
| Conread position: | 508-671 |
| Cow position: | chr29:23735043-23734879 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
Show alignments to all cow chromosomes.