• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8041I01.3
        

               
Conread position:
               
418-668
               

               
Cow position:
               
chr27:22748005-22748254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
429-769
               

               
Cow position:
               
chr27:16088480-16088834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
433-714
               

               
Cow position:
               
chr27:7304915-7304632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
444-764
               

               
Cow position:
               
chr27:15240769-15241082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
167, 26
               

               
Conread position:
               
447-762
               

               
Cow position:
               
chr27:31151094-31151396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
448-712
               

               
Cow position:
               
chr27:12658645-12658377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
448-764
               

               
Cow position:
               
chr27:30261187-30260869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
163, 283
               

               
Conread position:
               
449-684
               

               
Cow position:
               
chr27:29249297-29249534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
449-687
               

               
Cow position:
               
chr27:19293103-19292866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
147, 13
               

               
Conread position:
               
450-711
               

               
Cow position:
               
chr27:30415193-30414934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
450-764
               

               
Cow position:
               
chr27:16103519-16103828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 125
               

               
Conread position:
               
450-769
               

               
Cow position:
               
chr27:15865317-15865636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
452-763
               

               
Cow position:
               
chr27:18558070-18558378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 207
               

               
Conread position:
               
454-710
               

               
Cow position:
               
chr27:15926507-15926764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
455-697
               

               
Cow position:
               
chr27:4414099-4413863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
456-685
               

               
Cow position:
               
chr27:1067292-1067511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
458-769
               

               
Cow position:
               
chr27:2886119-2885807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
461-722
               

               
Cow position:
               
chr27:7343702-7343448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
153, 7
               

               
Conread position:
               
464-658
               

               
Cow position:
               
chr27:18813819-18813623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
464-666
               

               
Cow position:
               
chr27:15434059-15434249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
464-673
               

               
Cow position:
               
chr27:3498281-3498482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
149, 38
               

               
Conread position:
               
464-749
               

               
Cow position:
               
chr27:22035641-22035370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
464-762
               

               
Cow position:
               
chr27:29831980-29831680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
465-668
               

               
Cow position:
               
chr27:9253390-9253187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
465-690
               

               
Cow position:
               
chr27:11349012-11349224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
465-696
               

               
Cow position:
               
chr27:13204194-13204413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
147, 18
               

               
Conread position:
               
465-706
               

               
Cow position:
               
chr27:6330357-6330608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
465-710
               

               
Cow position:
               
chr27:26481469-26481227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
465-723
               

               
Cow position:
               
chr27:18435404-18435152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 37
               

               
Conread position:
               
465-729
               

               
Cow position:
               
chr27:8791015-8790754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 17
               

               
Conread position:
               
465-769
               

               
Cow position:
               
chr27:29613766-29613463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
465-769
               

               
Cow position:
               
chr27:30582469-30582764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
283, 21
               

               
Conread position:
               
466-645
               

               
Cow position:
               
chr27:21054183-21054363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
466-700
               

               
Cow position:
               
chr27:27531855-27532098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
466-737
               

               
Cow position:
               
chr27:12191761-12191483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
467-586
               

               
Cow position:
               
chr27:5806735-5806615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
467-706
               

               
Cow position:
               
chr27:25428180-25427945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
467-714
               

               
Cow position:
               
chr27:20719008-20719260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
467-727
               

               
Cow position:
               
chr27:14343708-14343470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
180, 72
               

               
Conread position:
               
467-728
               

               
Cow position:
               
chr27:31452068-31452330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
467-769
               

               
Cow position:
               
chr27:10979587-10979888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 267
               

               
Conread position:
               
468-680
               

               
Cow position:
               
chr27:24559847-24559637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
126, 66
               

               
Conread position:
               
468-686
               

               
Cow position:
               
chr27:18987945-18988167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
468-698
               

               
Cow position:
               
chr27:21341327-21341562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
468-719
               

               
Cow position:
               
chr27:3518230-3518482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
468-725
               

               
Cow position:
               
chr27:24303670-24303929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
468-766
               

               
Cow position:
               
chr27:31373243-31372956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
469-623
               

               
Cow position:
               
chr27:20055755-20055901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
142, 32
               

               
Conread position:
               
469-659
               

               
Cow position:
               
chr27:19991877-19992071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
469-661
               

               
Cow position:
               
chr27:10581265-10581452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 32
               

               
Conread position:
               
469-687
               

               
Cow position:
               
chr27:20485771-20486002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
469-699
               

               
Cow position:
               
chr27:27255697-27255945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
469-716
               

               
Cow position:
               
chr27:29991727-29991473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
469-767
               

               
Cow position:
               
chr27:1768890-1768599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
469-769
               

               
Cow position:
               
chr27:23929707-23930001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
470-697
               

               
Cow position:
               
chr27:7221523-7221298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
470-708
               

               
Cow position:
               
chr27:19818343-19818586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
470-716
               

               
Cow position:
               
chr27:11480905-11480662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 14
               

               
Conread position:
               
470-721
               

               
Cow position:
               
chr27:20828970-20828731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
144, 6
               

               
Conread position:
               
470-726
               

               
Cow position:
               
chr27:26245817-26245561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
20, 193
               

               
Conread position:
               
470-764
               

               
Cow position:
               
chr27:17995217-17994923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 263
               

               
Conread position:
               
470-769
               

               
Cow position:
               
chr27:19546790-19546486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
471-579
               

               
Cow position:
               
chr27:22708726-22708836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
471-682
               

               
Cow position:
               
chr27:23232643-23232857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
471-727
               

               
Cow position:
               
chr27:26883528-26883270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
138, 49
               

               
Conread position:
               
471-764
               

               
Cow position:
               
chr27:25151820-25152102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 156
               

               
Conread position:
               
471-764
               

               
Cow position:
               
chr27:28922164-28921877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 182
               

               
Conread position:
               
471-764
               

               
Cow position:
               
chr27:30914738-30915027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 200
               

               
Conread position:
               
471-769
               

               
Cow position:
               
chr27:6924812-6925114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
472-587
               

               
Cow position:
               
chr27:6888504-6888384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
472-613
               

               
Cow position:
               
chr27:17173006-17173142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
472-618
               

               
Cow position:
               
chr27:28472961-28472814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
472-649
               

               
Cow position:
               
chr27:17912793-17912613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
472-678
               

               
Cow position:
               
chr27:13236708-13236498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
472-769
               

               
Cow position:
               
chr27:20514556-20514846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
473-637
               

               
Cow position:
               
chr27:23527766-23527606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 96
               

               
Conread position:
               
473-646
               

               
Cow position:
               
chr27:1779120-1778951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
473-656
               

               
Cow position:
               
chr27:26317801-26317980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
473-702
               

               
Cow position:
               
chr27:18791780-18791549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 29
               

               
Conread position:
               
473-711
               

               
Cow position:
               
chr27:29431205-29431433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
473-712
               

               
Cow position:
               
chr27:672397-672625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 161
               

               
Conread position:
               
473-762
               

               
Cow position:
               
chr27:30869017-30868722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 29
               

               
Conread position:
               
473-764
               

               
Cow position:
               
chr27:15238477-15238763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
141, 22
               

               
Conread position:
               
473-769
               

               
Cow position:
               
chr27:8062618-8062329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
474-574
               

               
Cow position:
               
chr27:25368086-25368186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
474-659
               

               
Cow position:
               
chr27:22583475-22583664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
474-661
               

               
Cow position:
               
chr27:1292478-1292666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
137, 129
               

               
Conread position:
               
474-666
               

               
Cow position:
               
chr27:16505172-16504986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
137, 82
               

               
Conread position:
               
474-676
               

               
Cow position:
               
chr27:14203438-14203237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
6, 62
               

               
Conread position:
               
474-688
               

               
Cow position:
               
chr27:30458896-30458692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
474-693
               

               
Cow position:
               
chr27:12284731-12284945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
474-693
               

               
Cow position:
               
chr27:29308076-29308294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
474-693
               

               
Cow position:
               
chr27:29458062-29458295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
474-694
               

               
Cow position:
               
chr27:6282566-6282785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
474-694
               

               
Cow position:
               
chr27:12907881-12907662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 63
               

               
Conread position:
               
474-698
               

               
Cow position:
               
chr27:21419449-21419235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
474-711
               

               
Cow position:
               
chr27:13255059-13254828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
474-714
               

               
Cow position:
               
chr27:19314666-19314432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
137, 155
               

               
Conread position:
               
474-716
               

               
Cow position:
               
chr27:26173232-26173471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
136, 169
               

               
Conread position:
               
474-721
               

               
Cow position:
               
chr27:20869950-20869703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 111
               

               
Conread position:
               
474-722
               

               
Cow position:
               
chr27:9338251-9337997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
114, 164
               

               
Conread position:
               
474-723
               

               
Cow position:
               
chr27:13251766-13251994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
474-725
               

               
Cow position:
               
chr27:18507381-18507633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
474-728
               

               
Cow position:
               
chr27:26434076-26433817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
474-729
               

               
Cow position:
               
chr27:23147899-23148153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
474-753
               

               
Cow position:
               
chr27:10323580-10323846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
474-764
               

               
Cow position:
               
chr27:27438771-27438488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
474-769
               

               
Cow position:
               
chr27:6290208-6290497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 46
               

               
Conread position:
               
474-769
               

               
Cow position:
               
chr27:7346408-7346691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
474-769
               

               
Cow position:
               
chr27:17331230-17331524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
475-630
               

               
Cow position:
               
chr27:22181795-22181960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
475-641
               

               
Cow position:
               
chr27:22614589-22614760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
475-651
               

               
Cow position:
               
chr27:11986561-11986381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
475-655
               

               
Cow position:
               
chr27:11492167-11492349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
475-670
               

               
Cow position:
               
chr27:23069839-23070022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
475-673
               

               
Cow position:
               
chr27:21143341-21143136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
475-680
               

               
Cow position:
               
chr27:18491304-18491494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
475-685
               

               
Cow position:
               
chr27:1810353-1810144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
138, 146
               

               
Conread position:
               
475-705
               

               
Cow position:
               
chr27:2012341-2012107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
475-709
               

               
Cow position:
               
chr27:23527053-23527280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
475-711
               

               
Cow position:
               
chr27:7801800-7802040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 116
               

               
Conread position:
               
475-732
               

               
Cow position:
               
chr27:15315258-15315507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
475-741
               

               
Cow position:
               
chr27:30483570-30483298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
475-761
               

               
Cow position:
               
chr27:20553040-20552753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
475-764
               

               
Cow position:
               
chr27:23560296-23560010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
475-769
               

               
Cow position:
               
chr27:15867128-15867421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 89
               

               
Conread position:
               
475-769
               

               
Cow position:
               
chr27:23859897-23860193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
475-772
               

               
Cow position:
               
chr27:21408836-21408533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
475-772
               

               
Cow position:
               
chr27:26852847-26852564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 172
               

               
Conread position:
               
476-579
               

               
Cow position:
               
chr27:28290577-28290683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
476-579
               

               
Cow position:
               
chr27:30998567-30998667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
476-586
               

               
Cow position:
               
chr27:11080582-11080693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
476-588
               

               
Cow position:
               
chr27:31359082-31358970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
476-599
               

               
Cow position:
               
chr27:28058171-28058296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
476-625
               

               
Cow position:
               
chr27:6660842-6660987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 91
               

               
Conread position:
               
476-628
               

               
Cow position:
               
chr27:15162775-15162929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr27:4195289-4195463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
476-659
               

               
Cow position:
               
chr27:11077568-11077754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
476-673
               

               
Cow position:
               
chr27:23477682-23477877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
476-673
               

               
Cow position:
               
chr27:27606558-27606365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
476-674
               

               
Cow position:
               
chr27:11940512-11940294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
476-674
               

               
Cow position:
               
chr27:15350614-15350415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
476-680
               

               
Cow position:
               
chr27:21201925-21202131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
476-690
               

               
Cow position:
               
chr27:29526697-29526910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 142
               

               
Conread position:
               
476-691
               

               
Cow position:
               
chr27:23941214-23940999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
476-692
               

               
Cow position:
               
chr27:11708096-11707882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 93
               

               
Conread position:
               
476-693
               

               
Cow position:
               
chr27:11133826-11134037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
476-695
               

               
Cow position:
               
chr27:19483367-19483148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
476-699
               

               
Cow position:
               
chr27:9504289-9504510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
134, 186
               

               
Conread position:
               
476-700
               

               
Cow position:
               
chr27:26400981-26400763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 88
               

               
Conread position:
               
476-706
               

               
Cow position:
               
chr27:11356825-11357063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 98
               

               
Conread position:
               
476-707
               

               
Cow position:
               
chr27:20548547-20548776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
476-709
               

               
Cow position:
               
chr27:23582610-23582842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
476-714
               

               
Cow position:
               
chr27:15870895-15871133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
135, 118
               

               
Conread position:
               
476-714
               

               
Cow position:
               
chr27:20653524-20653283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
476-714
               

               
Cow position:
               
chr27:24007200-24007440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
476-718
               

               
Cow position:
               
chr27:4264964-4264716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
476-722
               

               
Cow position:
               
chr27:27405332-27405086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
476-722
               

               
Cow position:
               
chr27:30374844-30374588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 25
               

               
Conread position:
               
476-723
               

               
Cow position:
               
chr27:6241458-6241211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
476-724
               

               
Cow position:
               
chr27:10598723-10598971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
476-725
               

               
Cow position:
               
chr27:10404385-10404133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 200
               

               
Conread position:
               
476-725
               

               
Cow position:
               
chr27:26121493-26121743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
476-728
               

               
Cow position:
               
chr27:27003523-27003279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
476-731
               

               
Cow position:
               
chr27:19607927-19607668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 196
               

               
Conread position:
               
476-759
               

               
Cow position:
               
chr27:20336823-20337116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
476-764
               

               
Cow position:
               
chr27:7649857-7649564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
476-764
               

               
Cow position:
               
chr27:15865968-15866236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
476-764
               

               
Cow position:
               
chr27:19500497-19500215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
476-767
               

               
Cow position:
               
chr27:14269594-14269318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
476-767
               

               
Cow position:
               
chr27:26413542-26413230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
55, 281
               

               
Conread position:
               
476-769
               

               
Cow position:
               
chr27:7851125-7851413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
476-769
               

               
Cow position:
               
chr27:17472550-17472834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
476-769
               

               
Cow position:
               
chr27:20354335-20354609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
476-776
               

               
Cow position:
               
chr27:5545314-5545614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
477-650
               

               
Cow position:
               
chr27:26939815-26939985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
477-658
               

               
Cow position:
               
chr27:20487076-20487257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
477-659
               

               
Cow position:
               
chr27:19774804-19774988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
477-659
               

               
Cow position:
               
chr27:19779614-19779794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
477-659
               

               
Cow position:
               
chr27:21660876-21661053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
477-685
               

               
Cow position:
               
chr27:26314384-26314180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
135, 29
               

               
Conread position:
               
477-687
               

               
Cow position:
               
chr27:4398746-4398546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
477-688
               

               
Cow position:
               
chr27:2064270-2064481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
131, 110
               

               
Conread position:
               
477-694
               

               
Cow position:
               
chr27:28016001-28015783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
477-695
               

               
Cow position:
               
chr27:13801542-13801762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
477-714
               

               
Cow position:
               
chr27:1981077-1981316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
477-721
               

               
Cow position:
               
chr27:29319141-29319390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
477-728
               

               
Cow position:
               
chr27:31170335-31170078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
105, 184
               

               
Conread position:
               
477-758
               

               
Cow position:
               
chr27:2957156-2957419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
134, 18
               

               
Conread position:
               
477-761
               

               
Cow position:
               
chr27:10658915-10659200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
477-764
               

               
Cow position:
               
chr27:19669068-19668775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
134, 151
               

               
Conread position:
               
477-769
               

               
Cow position:
               
chr27:1353317-1353612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
477-769
               

               
Cow position:
               
chr27:20078602-20078889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
131, 185
               

               
Conread position:
               
477-769
               

               
Cow position:
               
chr27:26428389-26428108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
477-771
               

               
Cow position:
               
chr27:26509417-26509134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
477-778
               

               
Cow position:
               
chr27:29598011-29597716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
478-610
               

               
Cow position:
               
chr27:24967140-24967006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
478-672
               

               
Cow position:
               
chr27:18121313-18121116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
478-678
               

               
Cow position:
               
chr27:4544612-4544412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
478-691
               

               
Cow position:
               
chr27:31505538-31505322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
478-692
               

               
Cow position:
               
chr27:14005153-14005359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
478-697
               

               
Cow position:
               
chr27:15237551-15237768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
478-714
               

               
Cow position:
               
chr27:22427097-22426860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
478-722
               

               
Cow position:
               
chr27:26163141-26163386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 219
               

               
Conread position:
               
478-728
               

               
Cow position:
               
chr27:24495520-24495758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
478-764
               

               
Cow position:
               
chr27:17397711-17397431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
134, 23
               

               
Conread position:
               
478-764
               

               
Cow position:
               
chr27:19932804-19933085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 235
               

               
Conread position:
               
478-764
               

               
Cow position:
               
chr27:26226546-26226270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
478-764
               

               
Cow position:
               
chr27:27554944-27554663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
478-769
               

               
Cow position:
               
chr27:12564691-12564398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
478-769
               

               
Cow position:
               
chr27:13869358-13869649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 242
               

               
Conread position:
               
479-639
               

               
Cow position:
               
chr27:21981544-21981383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
479-645
               

               
Cow position:
               
chr27:18215418-18215261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
479-680
               

               
Cow position:
               
chr27:20266485-20266287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
479-709
               

               
Cow position:
               
chr27:6162665-6162443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
479-714
               

               
Cow position:
               
chr27:14817969-14818205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
479-757
               

               
Cow position:
               
chr27:26437381-26437105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 103
               

               
Conread position:
               
479-769
               

               
Cow position:
               
chr27:28896617-28896905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 190
               

               
Conread position:
               
479-769
               

               
Cow position:
               
chr27:29798691-29798979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 178
               

               
Conread position:
               
480-659
               

               
Cow position:
               
chr27:12948054-12947877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
480-685
               

               
Cow position:
               
chr27:26087060-26087255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
480-691
               

               
Cow position:
               
chr27:28232192-28231989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
480-711
               

               
Cow position:
               
chr27:31169365-31169141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
480-725
               

               
Cow position:
               
chr27:27740554-27740308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
480-735
               

               
Cow position:
               
chr27:22245385-22245619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
480-769
               

               
Cow position:
               
chr27:2592274-2592573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
481-671
               

               
Cow position:
               
chr27:1674556-1674374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
481-679
               

               
Cow position:
               
chr27:20081390-20081192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 118
               

               
Conread position:
               
481-680
               

               
Cow position:
               
chr27:6505509-6505305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
481-682
               

               
Cow position:
               
chr27:30884765-30884968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
481-684
               

               
Cow position:
               
chr27:27450142-27449943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
131, 93
               

               
Conread position:
               
481-693
               

               
Cow position:
               
chr27:27828114-27827900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
481-721
               

               
Cow position:
               
chr27:6106448-6106678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
481-764
               

               
Cow position:
               
chr27:10582112-10582392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
481-764
               

               
Cow position:
               
chr27:23594060-23594342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
481-769
               

               
Cow position:
               
chr27:16965315-16965598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
482-659
               

               
Cow position:
               
chr27:18749175-18748992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
483-645
               

               
Cow position:
               
chr27:22150952-22150791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
484-574
               

               
Cow position:
               
chr27:1789435-1789345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
484-597
               

               
Cow position:
               
chr27:634677-634566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
484-599
               

               
Cow position:
               
chr27:22325439-22325324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
484-607
               

               
Cow position:
               
chr27:20590358-20590480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
484-639
               

               
Cow position:
               
chr27:5480835-5480679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
484-642
               

               
Cow position:
               
chr27:30441446-30441605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
484-659
               

               
Cow position:
               
chr27:19074279-19074105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
127, 106
               

               
Conread position:
               
484-670
               

               
Cow position:
               
chr27:31183317-31183504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
484-671
               

               
Cow position:
               
chr27:31153808-31153628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
484-678
               

               
Cow position:
               
chr27:20127554-20127361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
127, 107
               

               
Conread position:
               
484-680
               

               
Cow position:
               
chr27:18752591-18752794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
78, 153
               

               
Conread position:
               
484-685
               

               
Cow position:
               
chr27:6679632-6679431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
484-693
               

               
Cow position:
               
chr27:20484476-20484681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
484-693
               

               
Cow position:
               
chr27:31498530-31498730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
484-695
               

               
Cow position:
               
chr27:1184429-1184224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
484-695
               

               
Cow position:
               
chr27:20327240-20327453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
484-695
               

               
Cow position:
               
chr27:26236076-26236279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
484-697
               

               
Cow position:
               
chr27:5539948-5539740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
484-697
               

               
Cow position:
               
chr27:13181648-13181866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
162, 49
               

               
Conread position:
               
484-701
               

               
Cow position:
               
chr27:16246553-16246766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
484-710
               

               
Cow position:
               
chr27:1190735-1190505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
484-712
               

               
Cow position:
               
chr27:22730948-22730711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
484-715
               

               
Cow position:
               
chr27:20540034-20539799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
484-723
               

               
Cow position:
               
chr27:19496623-19496865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 142
               

               
Conread position:
               
484-724
               

               
Cow position:
               
chr27:16249633-16249397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
484-725
               

               
Cow position:
               
chr27:4944760-4944531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
484-728
               

               
Cow position:
               
chr27:20501580-20501826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
484-729
               

               
Cow position:
               
chr27:31004687-31004932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
484-754
               

               
Cow position:
               
chr27:20812668-20812916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
484-754
               

               
Cow position:
               
chr27:31210295-31210558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
484-757
               

               
Cow position:
               
chr27:18882401-18882668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
484-759
               

               
Cow position:
               
chr27:19508757-19509030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
484-761
               

               
Cow position:
               
chr27:7212984-7212694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
484-762
               

               
Cow position:
               
chr27:25809770-25809505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr27:5553216-5553491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr27:7935412-7935138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr27:12515939-12516211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr27:15925092-15925361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr27:26794040-26793768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr27:27020351-27020084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
127, 51
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr27:28279924-28280204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr27:29185101-29184818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 243
               

               
Conread position:
               
484-766
               

               
Cow position:
               
chr27:27558762-27558476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 159
               

               
Conread position:
               
484-767
               

               
Cow position:
               
chr27:23545594-23545302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 276
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr27:13875477-13875756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 134
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr27:20749261-20748982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr27:22220295-22220581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr27:23510721-23511015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr27:29236301-29236606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr27:29380606-29380881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr27:29593884-29593603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr27:30872313-30872034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
484-781
               

               
Cow position:
               
chr27:24228060-24227757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
84, 251
               

               
Conread position:
               
485-653
               

               
Cow position:
               
chr27:26154062-26154232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
485-690
               

               
Cow position:
               
chr27:24356779-24356986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
485-722
               

               
Cow position:
               
chr27:31386885-31386650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
126, 97
               

               
Conread position:
               
485-728
               

               
Cow position:
               
chr27:26323187-26323435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
84, 212
               

               
Conread position:
               
485-763
               

               
Cow position:
               
chr27:8962496-8962237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
487-659
               

               
Cow position:
               
chr27:30991210-30991385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
487-693
               

               
Cow position:
               
chr27:22792586-22792783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 86
               

               
Conread position:
               
487-702
               

               
Cow position:
               
chr27:179148-178935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
487-725
               

               
Cow position:
               
chr27:26565542-26565773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
212, 103
               

               
Conread position:
               
487-728
               

               
Cow position:
               
chr27:27460830-27460583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
487-764
               

               
Cow position:
               
chr27:27442414-27442147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
488-644
               

               
Cow position:
               
chr27:22102893-22102741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
488-651
               

               
Cow position:
               
chr27:21101545-21101381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
488-682
               

               
Cow position:
               
chr27:29246395-29246211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
488-705
               

               
Cow position:
               
chr27:24223702-24223915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
488-761
               

               
Cow position:
               
chr27:12425036-12425306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
119, 137
               

               
Conread position:
               
488-763
               

               
Cow position:
               
chr27:23128213-23128475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 147
               

               
Conread position:
               
488-769
               

               
Cow position:
               
chr27:21990891-21991179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
112, 102
               

               
Conread position:
               
489-627
               

               
Cow position:
               
chr27:16886847-16886987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
489-635
               

               
Cow position:
               
chr27:19653828-19653678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
489-637
               

               
Cow position:
               
chr27:29399357-29399499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
122, 75
               

               
Conread position:
               
489-642
               

               
Cow position:
               
chr27:24952202-24952054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
489-655
               

               
Cow position:
               
chr27:23760229-23760068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
489-677
               

               
Cow position:
               
chr27:24205131-24205319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
119, 106
               

               
Conread position:
               
489-678
               

               
Cow position:
               
chr27:6791102-6790918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 98
               

               
Conread position:
               
489-683
               

               
Cow position:
               
chr27:18031321-18031134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
122, 73
               

               
Conread position:
               
489-685
               

               
Cow position:
               
chr27:14443369-14443557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
489-686
               

               
Cow position:
               
chr27:20048386-20048578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 88
               

               
Conread position:
               
489-689
               

               
Cow position:
               
chr27:19411871-19411670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
489-691
               

               
Cow position:
               
chr27:11507515-11507314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
489-692
               

               
Cow position:
               
chr27:21385638-21385444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
489-695
               

               
Cow position:
               
chr27:22586711-22586918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
489-696
               

               
Cow position:
               
chr27:18688661-18688455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
489-698
               

               
Cow position:
               
chr27:20519815-20519606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
489-700
               

               
Cow position:
               
chr27:19576576-19576365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
489-709
               

               
Cow position:
               
chr27:27648566-27648350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
123, 86
               

               
Conread position:
               
489-711
               

               
Cow position:
               
chr27:19681698-19681921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
489-714
               

               
Cow position:
               
chr27:2930842-2930616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
489-714
               

               
Cow position:
               
chr27:13639238-13639011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
489-715
               

               
Cow position:
               
chr27:12187375-12187148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
489-716
               

               
Cow position:
               
chr27:15332540-15332321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
489-722
               

               
Cow position:
               
chr27:20101116-20101351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 106
               

               
Conread position:
               
489-728
               

               
Cow position:
               
chr27:14670630-14670396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
489-754
               

               
Cow position:
               
chr27:6541384-6541639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
489-761
               

               
Cow position:
               
chr27:10436979-10436713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
489-763
               

               
Cow position:
               
chr27:11435578-11435303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 133
               

               
Conread position:
               
489-764
               

               
Cow position:
               
chr27:591017-590740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
489-764
               

               
Cow position:
               
chr27:10992123-10992377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
489-764
               

               
Cow position:
               
chr27:18543737-18544014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
182, 101
               

               
Conread position:
               
489-764
               

               
Cow position:
               
chr27:20584718-20584437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
489-764
               

               
Cow position:
               
chr27:22513932-22513656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
104, 255
               

               
Conread position:
               
489-765
               

               
Cow position:
               
chr27:11561524-11561797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 33
               

               
Conread position:
               
489-769
               

               
Cow position:
               
chr27:3306535-3306795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
489-769
               

               
Cow position:
               
chr27:22171053-22171325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
489-769
               

               
Cow position:
               
chr27:28190442-28190189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
489-769
               

               
Cow position:
               
chr27:30407298-30407012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 209
               

               
Conread position:
               
489-772
               

               
Cow position:
               
chr27:24393742-24394025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 250
               

               
Conread position:
               
490-680
               

               
Cow position:
               
chr27:26980213-26980024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
490-687
               

               
Cow position:
               
chr27:30694460-30694262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
490-697
               

               
Cow position:
               
chr27:14894079-14893868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
490-711
               

               
Cow position:
               
chr27:29370231-29370451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
132, 112
               

               
Conread position:
               
490-714
               

               
Cow position:
               
chr27:13940800-13940585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
490-721
               

               
Cow position:
               
chr27:13842954-13843187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
490-749
               

               
Cow position:
               
chr27:426721-426975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
491-666
               

               
Cow position:
               
chr27:29614793-29614966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
491-673
               

               
Cow position:
               
chr27:28095703-28095520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
491-687
               

               
Cow position:
               
chr27:24358093-24358278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
491-691
               

               
Cow position:
               
chr27:31248855-31248664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
125, 80
               

               
Conread position:
               
491-707
               

               
Cow position:
               
chr27:22547635-22547434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
491-710
               

               
Cow position:
               
chr27:5466635-5466418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
120, 103
               

               
Conread position:
               
491-712
               

               
Cow position:
               
chr27:22401234-22401457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
491-714
               

               
Cow position:
               
chr27:7537431-7537656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
491-722
               

               
Cow position:
               
chr27:15453966-15454188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
491-728
               

               
Cow position:
               
chr27:20897268-20897039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
491-757
               

               
Cow position:
               
chr27:11982897-11982635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 147
               

               
Conread position:
               
491-761
               

               
Cow position:
               
chr27:6787704-6787972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 11
               

               
Conread position:
               
491-761
               

               
Cow position:
               
chr27:23918281-23918011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
491-763
               

               
Cow position:
               
chr27:26112166-26111891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
491-764
               

               
Cow position:
               
chr27:13841114-13841393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
491-764
               

               
Cow position:
               
chr27:23632360-23632616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
492-645
               

               
Cow position:
               
chr27:4487028-4486874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
492-658
               

               
Cow position:
               
chr27:26885757-26885593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
492-659
               

               
Cow position:
               
chr27:2036478-2036637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
492-659
               

               
Cow position:
               
chr27:25000215-25000043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
492-667
               

               
Cow position:
               
chr27:11528681-11528856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
492-678
               

               
Cow position:
               
chr27:2325760-2325957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
492-680
               

               
Cow position:
               
chr27:4390505-4390320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
492-698
               

               
Cow position:
               
chr27:25790054-25790248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
492-716
               

               
Cow position:
               
chr27:29388424-29388646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 82
               

               
Conread position:
               
492-728
               

               
Cow position:
               
chr27:7971313-7971550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
492-728
               

               
Cow position:
               
chr27:23507402-23507639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
492-729
               

               
Cow position:
               
chr27:16512415-16512184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
492-729
               

               
Cow position:
               
chr27:16786583-16786817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
494-602
               

               
Cow position:
               
chr27:31479028-31479137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
494-630
               

               
Cow position:
               
chr27:6751932-6752069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
494-645
               

               
Cow position:
               
chr27:27012450-27012602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
494-661
               

               
Cow position:
               
chr27:18873807-18873967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
494-675
               

               
Cow position:
               
chr27:26983917-26984095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
494-680
               

               
Cow position:
               
chr27:11454418-11454231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
494-680
               

               
Cow position:
               
chr27:12432404-12432217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
494-684
               

               
Cow position:
               
chr27:11208803-11208612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
494-690
               

               
Cow position:
               
chr27:31209187-31208989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 149
               

               
Conread position:
               
494-691
               

               
Cow position:
               
chr27:21677676-21677474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
494-711
               

               
Cow position:
               
chr27:17933677-17933895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
494-714
               

               
Cow position:
               
chr27:11323081-11323302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
494-714
               

               
Cow position:
               
chr27:14249088-14249306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
494-731
               

               
Cow position:
               
chr27:23170061-23169822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
494-764
               

               
Cow position:
               
chr27:11151426-11151692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
249, 10
               

               
Conread position:
               
494-764
               

               
Cow position:
               
chr27:28932048-28931774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 90
               

               
Conread position:
               
494-769
               

               
Cow position:
               
chr27:6499812-6500083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
119, 223
               

               
Conread position:
               
495-642
               

               
Cow position:
               
chr27:31443811-31443956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
495-668
               

               
Cow position:
               
chr27:262091-262263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr27:11145637-11145807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
116, 91
               

               
Conread position:
               
495-676
               

               
Cow position:
               
chr27:21951225-21951044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
116, 89
               

               
Conread position:
               
495-683
               

               
Cow position:
               
chr27:31515798-31515608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
495-693
               

               
Cow position:
               
chr27:22267975-22268176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 175
               

               
Conread position:
               
495-695
               

               
Cow position:
               
chr27:26118252-26118453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
495-701
               

               
Cow position:
               
chr27:28301136-28300929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 155
               

               
Conread position:
               
495-710
               

               
Cow position:
               
chr27:20612276-20612489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 95
               

               
Conread position:
               
495-723
               

               
Cow position:
               
chr27:7412149-7412373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
117, 77
               

               
Conread position:
               
495-725
               

               
Cow position:
               
chr27:15669019-15668788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
495-729
               

               
Cow position:
               
chr27:5614341-5614573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
495-729
               

               
Cow position:
               
chr27:26984109-26984334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
495-744
               

               
Cow position:
               
chr27:9977441-9977692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
495-746
               

               
Cow position:
               
chr27:28018078-28018341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
495-747
               

               
Cow position:
               
chr27:27058650-27058403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
197, 0
               

               
Conread position:
               
495-763
               

               
Cow position:
               
chr27:212706-212983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 196
               

               
Conread position:
               
495-763
               

               
Cow position:
               
chr27:22439892-22440159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 229
               

               
Conread position:
               
495-769
               

               
Cow position:
               
chr27:15409270-15409009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
495-769
               

               
Cow position:
               
chr27:16705008-16705277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
495-769
               

               
Cow position:
               
chr27:30814172-30814443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
229, 50
               

               
Conread position:
               
496-658
               

               
Cow position:
               
chr27:19805940-19805780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 132
               

               
Conread position:
               
496-659
               

               
Cow position:
               
chr27:29877720-29877556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
496-695
               

               
Cow position:
               
chr27:28253992-28254191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
115, 140
               

               
Conread position:
               
496-719
               

               
Cow position:
               
chr27:11464677-11464455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 200
               

               
Conread position:
               
496-724
               

               
Cow position:
               
chr27:29494142-29493915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
496-725
               

               
Cow position:
               
chr27:28496614-28496389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
496-764
               

               
Cow position:
               
chr27:22602931-22603196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
50, 176
               

               
Conread position:
               
496-764
               

               
Cow position:
               
chr27:28002047-28001790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 72
               

               
Conread position:
               
497-692
               

               
Cow position:
               
chr27:13803337-13803529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
499-704
               

               
Cow position:
               
chr27:17102659-17102857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
499-748
               

               
Cow position:
               
chr27:7731515-7731241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
499-752
               

               
Cow position:
               
chr27:15204477-15204220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
62, 233
               

               
Conread position:
               
499-763
               

               
Cow position:
               
chr27:13411609-13411344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
500-599
               

               
Cow position:
               
chr27:23996361-23996263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
500-714
               

               
Cow position:
               
chr27:22489033-22489249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
501-627
               

               
Cow position:
               
chr27:20785882-20786009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
501-638
               

               
Cow position:
               
chr27:26467800-26467662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
501-660
               

               
Cow position:
               
chr27:178624-178781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
111, 82
               

               
Conread position:
               
501-670
               

               
Cow position:
               
chr27:30444913-30444752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
111, 49
               

               
Conread position:
               
501-678
               

               
Cow position:
               
chr27:9956673-9956495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
501-678
               

               
Cow position:
               
chr27:31157786-31157966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
501-684
               

               
Cow position:
               
chr27:24240113-24240301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
501-685
               

               
Cow position:
               
chr27:14472416-14472240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
501-685
               

               
Cow position:
               
chr27:31157571-31157755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
501-692
               

               
Cow position:
               
chr27:20324900-20325093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 191
               

               
Conread position:
               
501-705
               

               
Cow position:
               
chr27:19717659-19717878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
501-711
               

               
Cow position:
               
chr27:27389266-27389052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
501-722
               

               
Cow position:
               
chr27:27055057-27055266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 68
               

               
Conread position:
               
501-729
               

               
Cow position:
               
chr27:299613-299394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
501-748
               

               
Cow position:
               
chr27:23994654-23994414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
501-762
               

               
Cow position:
               
chr27:18646388-18646127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
111, 82
               

               
Conread position:
               
501-762
               

               
Cow position:
               
chr27:20045657-20045903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr27:1637165-1636915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr27:5744616-5744885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 241
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr27:10307542-10307282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr27:16275919-16275641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
501-765
               

               
Cow position:
               
chr27:24331475-24331742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
501-769
               

               
Cow position:
               
chr27:12596543-12596790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
502-659
               

               
Cow position:
               
chr27:26859330-26859174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 94
               

               
Conread position:
               
502-695
               

               
Cow position:
               
chr27:29892484-29892680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
502-711
               

               
Cow position:
               
chr27:15003217-15003009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 81
               

               
Conread position:
               
502-716
               

               
Cow position:
               
chr27:29693229-29693452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
502-762
               

               
Cow position:
               
chr27:22550008-22549753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
502-767
               

               
Cow position:
               
chr27:26920164-26919878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
502-769
               

               
Cow position:
               
chr27:20283406-20283667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
502-769
               

               
Cow position:
               
chr27:29816867-29816595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
503-639
               

               
Cow position:
               
chr27:20826034-20825893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
503-692
               

               
Cow position:
               
chr27:30701958-30702147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
503-711
               

               
Cow position:
               
chr27:20637295-20637092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
108, 72
               

               
Conread position:
               
503-729
               

               
Cow position:
               
chr27:30455756-30455981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
503-764
               

               
Cow position:
               
chr27:21978380-21978119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
504-715
               

               
Cow position:
               
chr27:29160220-29160013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 166
               

               
Conread position:
               
504-769
               

               
Cow position:
               
chr27:30764797-30765061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
505-744
               

               
Cow position:
               
chr27:26999659-26999420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
505-772
               

               
Cow position:
               
chr27:4858854-4858610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
506-650
               

               
Cow position:
               
chr27:20561354-20561490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
506-669
               

               
Cow position:
               
chr27:29183460-29183289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
506-691
               

               
Cow position:
               
chr27:26909822-26909641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
506-694
               

               
Cow position:
               
chr27:232317-232506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
506-699
               

               
Cow position:
               
chr27:30605465-30605656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
506-706
               

               
Cow position:
               
chr27:19557159-19557349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
506-764
               

               
Cow position:
               
chr27:2644332-2644071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
94, 152
               

               
Conread position:
               
506-769
               

               
Cow position:
               
chr27:16231174-16230910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
106, 215
               

               
Conread position:
               
506-769
               

               
Cow position:
               
chr27:23108136-23107876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
507-669
               

               
Cow position:
               
chr27:23930870-23930710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
104, 123
               

               
Conread position:
               
507-728
               

               
Cow position:
               
chr27:22735827-22735606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
104, 190
               

               
Conread position:
               
507-767
               

               
Cow position:
               
chr27:23554562-23554307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 137
               

               
Conread position:
               
508-630
               

               
Cow position:
               
chr27:700326-700203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
508-672
               

               
Cow position:
               
chr27:26175898-26175738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
508-674
               

               
Cow position:
               
chr27:23177544-23177380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 75
               

               
Conread position:
               
508-712
               

               
Cow position:
               
chr27:19755861-19756066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
508-763
               

               
Cow position:
               
chr27:29841952-29841712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
508-765
               

               
Cow position:
               
chr27:20368800-20369052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
102, 114
               

               
Conread position:
               
509-664
               

               
Cow position:
               
chr27:10994459-10994616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
509-680
               

               
Cow position:
               
chr27:30997060-30996890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
509-701
               

               
Cow position:
               
chr27:13903160-13902957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 188
               

               
Conread position:
               
509-709
               

               
Cow position:
               
chr27:19452768-19452969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
509-711
               

               
Cow position:
               
chr27:435001-435203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
509-711
               

               
Cow position:
               
chr27:20517421-20517627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
509-714
               

               
Cow position:
               
chr27:7959062-7958858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
509-714
               

               
Cow position:
               
chr27:11815978-11815775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
509-716
               

               
Cow position:
               
chr27:21393724-21393533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
509-754
               

               
Cow position:
               
chr27:30266851-30267097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 235
               

               
Conread position:
               
509-759
               

               
Cow position:
               
chr27:12459057-12459300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
509-764
               

               
Cow position:
               
chr27:23452232-23452479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
509-764
               

               
Cow position:
               
chr27:28518062-28518315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 225
               

               
Conread position:
               
509-766
               

               
Cow position:
               
chr27:11994098-11993842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 41
               

               
Conread position:
               
509-769
               

               
Cow position:
               
chr27:6550228-6550482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
509-769
               

               
Cow position:
               
chr27:19660697-19660960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
509-769
               

               
Cow position:
               
chr27:22560057-22559799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
509-769
               

               
Cow position:
               
chr27:23735738-23735985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
509-769
               

               
Cow position:
               
chr27:26490136-26489880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
510-698
               

               
Cow position:
               
chr27:22254560-22254751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 162
               

               
Conread position:
               
510-725
               

               
Cow position:
               
chr27:13318207-13317987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
510-725
               

               
Cow position:
               
chr27:23863347-23863572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 172
               

               
Conread position:
               
510-728
               

               
Cow position:
               
chr27:6319693-6319904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
510-768
               

               
Cow position:
               
chr27:26188597-26188853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 161
               

               
Conread position:
               
511-661
               

               
Cow position:
               
chr27:28172947-28172795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
511-714
               

               
Cow position:
               
chr27:18739145-18739349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
511-716
               

               
Cow position:
               
chr27:24731267-24731065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 112
               

               
Conread position:
               
511-725
               

               
Cow position:
               
chr27:24693189-24693392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
511-764
               

               
Cow position:
               
chr27:10653453-10653706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
511-769
               

               
Cow position:
               
chr27:27695004-27694746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
64, 156
               

               
Conread position:
               
511-769
               

               
Cow position:
               
chr27:29086345-29086086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
100, 125
               

               
Conread position:
               
512-655
               

               
Cow position:
               
chr27:26624979-26625122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
513-697
               

               
Cow position:
               
chr27:24755764-24755943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
513-764
               

               
Cow position:
               
chr27:23890706-23890959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 217
               

               
Conread position:
               
513-769
               

               
Cow position:
               
chr27:22455020-22454753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 233
               

               
Conread position:
               
514-725
               

               
Cow position:
               
chr27:26238798-26239009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
205, 78
               

               
Conread position:
               
515-680
               

               
Cow position:
               
chr27:23060341-23060175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
515-683
               

               
Cow position:
               
chr27:14701867-14701698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
516-677
               

               
Cow position:
               
chr27:17908485-17908324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
516-711
               

               
Cow position:
               
chr27:29977024-29977220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
518-769
               

               
Cow position:
               
chr27:22553100-22552857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
519-736
               

               
Cow position:
               
chr27:24709333-24709546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
93, 174
               

               
Conread position:
               
519-754
               

               
Cow position:
               
chr27:28478363-28478592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
520-728
               

               
Cow position:
               
chr27:21666301-21666092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
520-730
               

               
Cow position:
               
chr27:6674048-6674267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 152
               

               
Conread position:
               
522-714
               

               
Cow position:
               
chr27:19485653-19485846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
524-658
               

               
Cow position:
               
chr27:22236906-22237040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 114
               

               
Conread position:
               
524-764
               

               
Cow position:
               
chr27:17646373-17646147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
525-762
               

               
Cow position:
               
chr27:29603603-29603840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
526-680
               

               
Cow position:
               
chr27:18912735-18912585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
526-714
               

               
Cow position:
               
chr27:18884413-18884601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
526-764
               

               
Cow position:
               
chr27:19896549-19896775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
529-772
               

               
Cow position:
               
chr27:14303529-14303762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
534-696
               

               
Cow position:
               
chr27:27747674-27747511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
534-711
               

               
Cow position:
               
chr27:14841393-14841215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
534-760
               

               
Cow position:
               
chr27:15825929-15825708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
80, 169
               

               
Conread position:
               
537-699
               

               
Cow position:
               
chr27:27551159-27550996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
537-757
               

               
Cow position:
               
chr27:24022936-24023155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
548-764
               

               
Cow position:
               
chr27:28260726-28260517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
550-728
               

               
Cow position:
               
chr27:26959804-26959626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
550-772
               

               
Cow position:
               
chr27:7973984-7974202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
553-692
               

               
Cow position:
               
chr27:16205599-16205737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
557-763
               

               
Cow position:
               
chr27:19544105-19543899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
557-776
               

               
Cow position:
               
chr27:22423331-22423542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
558-764
               

               
Cow position:
               
chr27:28271335-28271131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
56, 173
               

               
Conread position:
               
559-758
               

               
Cow position:
               
chr27:6302651-6302448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
559-763
               

               
Cow position:
               
chr27:31018007-31017814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
559-769
               

               
Cow position:
               
chr27:18923016-18922805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
560-690
               

               
Cow position:
               
chr27:29658897-29658767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
560-691
               

               
Cow position:
               
chr27:28541295-28541163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
560-712
               

               
Cow position:
               
chr27:22723877-22723723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
560-725
               

               
Cow position:
               
chr27:26090495-26090328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
560-728
               

               
Cow position:
               
chr27:30908489-30908658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
560-729
               

               
Cow position:
               
chr27:16589885-16589715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
560-729
               

               
Cow position:
               
chr27:30489593-30489423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
560-758
               

               
Cow position:
               
chr27:30359224-30359422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 171
               

               
Conread position:
               
560-764
               

               
Cow position:
               
chr27:28467631-28467430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
560-769
               

               
Cow position:
               
chr27:15642992-15643196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 33
               

               
Conread position:
               
560-769
               

               
Cow position:
               
chr27:20795610-20795818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
560-769
               

               
Cow position:
               
chr27:30988615-30988821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
561-763
               

               
Cow position:
               
chr27:20803840-20803638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
562-721
               

               
Cow position:
               
chr27:14957906-14957750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
562-764
               

               
Cow position:
               
chr27:8168611-8168411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
52, 160
               

               
Conread position:
               
563-693
               

               
Cow position:
               
chr27:16237449-16237578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
563-725
               

               
Cow position:
               
chr27:13917254-13917422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
563-762
               

               
Cow position:
               
chr27:27039016-27038820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
563-764
               

               
Cow position:
               
chr27:4155820-4156022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
563-764
               

               
Cow position:
               
chr27:4386241-4386041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
49, 169
               

               
Conread position:
               
564-698
               

               
Cow position:
               
chr27:17918894-17918761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
564-763
               

               
Cow position:
               
chr27:15343456-15343261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
564-763
               

               
Cow position:
               
chr27:27270720-27270519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
564-769
               

               
Cow position:
               
chr27:17918490-17918290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
564-769
               

               
Cow position:
               
chr27:23877023-23876816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
565-764
               

               
Cow position:
               
chr27:20037295-20037094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
566-729
               

               
Cow position:
               
chr27:23895248-23895408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
566-769
               

               
Cow position:
               
chr27:15215050-15215258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
567-692
               

               
Cow position:
               
chr27:30665252-30665126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
568-725
               

               
Cow position:
               
chr27:27673190-27673033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
568-757
               

               
Cow position:
               
chr27:1789313-1789123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
568-764
               

               
Cow position:
               
chr27:26643515-26643706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
569-703
               

               
Cow position:
               
chr27:22153688-22153820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
569-758
               

               
Cow position:
               
chr27:25276970-25277155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
569-764
               

               
Cow position:
               
chr27:1291022-1290831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
569-769
               

               
Cow position:
               
chr27:20085383-20085589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 142
               

               
Conread position:
               
570-692
               

               
Cow position:
               
chr27:16822328-16822451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
570-711
               

               
Cow position:
               
chr27:14675188-14675046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
570-761
               

               
Cow position:
               
chr27:18826381-18826570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
574-721
               

               
Cow position:
               
chr27:1173903-1173755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
574-762
               

               
Cow position:
               
chr27:27064608-27064421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
574-769
               

               
Cow position:
               
chr27:27641179-27640977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
575-764
               

               
Cow position:
               
chr27:2034342-2034533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
577-763
               

               
Cow position:
               
chr27:21453260-21453073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
577-766
               

               
Cow position:
               
chr27:26347777-26347593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
581-769
               

               
Cow position:
               
chr27:8263500-8263310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
583-715
               

               
Cow position:
               
chr27:23216476-23216345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
583-750
               

               
Cow position:
               
chr27:30998405-30998234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
586-712
               

               
Cow position:
               
chr27:19004480-19004353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
586-758
               

               
Cow position:
               
chr27:12246497-12246674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
586-769
               

               
Cow position:
               
chr27:30389454-30389270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
587-769
               

               
Cow position:
               
chr27:26581592-26581411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
594-763
               

               
Cow position:
               
chr27:30354493-30354324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
594-769
               

               
Cow position:
               
chr27:22225741-22225570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
595-763
               

               
Cow position:
               
chr27:20497058-20497229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 166
               

               
Conread position:
               
595-764
               

               
Cow position:
               
chr27:18593125-18593289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
596-769
               

               
Cow position:
               
chr27:9169785-9169620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
599-772
               

               
Cow position:
               
chr27:715357-715530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
600-771
               

               
Cow position:
               
chr27:27844146-27843968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
611-769
               

               
Cow position:
               
chr27:21975922-21976074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
616-708
               

               
Cow position:
               
chr27:5484199-5484291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
629-764
               

               
Cow position:
               
chr27:3784-3918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
630-769
               

               
Cow position:
               
chr27:28472668-28472808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
632-769
               

               
Cow position:
               
chr27:24999850-24999715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               
Show alignments to all cow chromosomes.