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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8041I01.3
        

               
Conread position:
               
146-767
               

               
Cow position:
               
chr29:7104109-7103487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
467, 0
               

               
Conread position:
               
419-769
               

               
Cow position:
               
chr29:4624725-4625067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
432-760
               

               
Cow position:
               
chr29:25284207-25284524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
441-769
               

               
Cow position:
               
chr29:28734798-28735115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
141, 43
               

               
Conread position:
               
446-769
               

               
Cow position:
               
chr29:6337895-6337591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 37
               

               
Conread position:
               
447-764
               

               
Cow position:
               
chr29:3583865-3584176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 147
               

               
Conread position:
               
448-763
               

               
Cow position:
               
chr29:37618556-37618237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
448-769
               

               
Cow position:
               
chr29:16609998-16609672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
449-720
               

               
Cow position:
               
chr29:19949553-19949285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
449-723
               

               
Cow position:
               
chr29:17804766-17804509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
163, 19
               

               
Conread position:
               
451-675
               

               
Cow position:
               
chr29:35189850-35189628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
453-722
               

               
Cow position:
               
chr29:19910198-19909930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
454-680
               

               
Cow position:
               
chr29:16598686-16598470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
456-692
               

               
Cow position:
               
chr29:24319723-24319964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
457-686
               

               
Cow position:
               
chr29:24181875-24181644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
458-769
               

               
Cow position:
               
chr29:9709923-9709625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
459-712
               

               
Cow position:
               
chr29:34359591-34359836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
460-667
               

               
Cow position:
               
chr29:29264843-29265053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
464-655
               

               
Cow position:
               
chr29:11685400-11685208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
464-696
               

               
Cow position:
               
chr29:17085451-17085682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
464-769
               

               
Cow position:
               
chr29:19250573-19250278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
464-772
               

               
Cow position:
               
chr29:8004691-8004996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
465-659
               

               
Cow position:
               
chr29:24605123-24604933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
465-689
               

               
Cow position:
               
chr29:30021350-30021126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
465-714
               

               
Cow position:
               
chr29:37437902-37438153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
465-764
               

               
Cow position:
               
chr29:1325673-1325375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
465-769
               

               
Cow position:
               
chr29:26270299-26269996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
465-769
               

               
Cow position:
               
chr29:28739856-28739554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
465-770
               

               
Cow position:
               
chr29:23845072-23844764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 281
               

               
Conread position:
               
466-638
               

               
Cow position:
               
chr29:10839168-10838999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
466-725
               

               
Cow position:
               
chr29:20230054-20230320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
466-764
               

               
Cow position:
               
chr29:21196423-21196717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 111
               

               
Conread position:
               
466-769
               

               
Cow position:
               
chr29:26334162-26334458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
467-695
               

               
Cow position:
               
chr29:8046795-8047023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
467-697
               

               
Cow position:
               
chr29:22579699-22579470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
467-705
               

               
Cow position:
               
chr29:3661900-3662144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
467-706
               

               
Cow position:
               
chr29:22729789-22729558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
467-721
               

               
Cow position:
               
chr29:32307340-32307576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
467-730
               

               
Cow position:
               
chr29:36357353-36357095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
467-735
               

               
Cow position:
               
chr29:40350850-40351120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
467-765
               

               
Cow position:
               
chr29:2262753-2263063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
106, 209
               

               
Conread position:
               
468-621
               

               
Cow position:
               
chr29:31835493-31835347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
142, 6
               

               
Conread position:
               
468-692
               

               
Cow position:
               
chr29:31658514-31658729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 77
               

               
Conread position:
               
468-709
               

               
Cow position:
               
chr29:6819846-6819601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
469-654
               

               
Cow position:
               
chr29:18605444-18605618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
469-683
               

               
Cow position:
               
chr29:34675781-34675996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
469-692
               

               
Cow position:
               
chr29:353569-353794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 185
               

               
Conread position:
               
469-697
               

               
Cow position:
               
chr29:12648184-12647960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
469-697
               

               
Cow position:
               
chr29:26990729-26990492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 75
               

               
Conread position:
               
469-714
               

               
Cow position:
               
chr29:20673579-20673828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
469-730
               

               
Cow position:
               
chr29:15944790-15944525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 198
               

               
Conread position:
               
469-763
               

               
Cow position:
               
chr29:30441165-30440867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 150
               

               
Conread position:
               
470-637
               

               
Cow position:
               
chr29:20644142-20643974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 52
               

               
Conread position:
               
470-659
               

               
Cow position:
               
chr29:16438548-16438742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
470-691
               

               
Cow position:
               
chr29:8628870-8629094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
470-714
               

               
Cow position:
               
chr29:1933344-1933589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
470-762
               

               
Cow position:
               
chr29:44378181-44378478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 190
               

               
Conread position:
               
470-769
               

               
Cow position:
               
chr29:32894482-32894198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 92
               

               
Conread position:
               
471-680
               

               
Cow position:
               
chr29:28949209-28948990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
114, 199
               

               
Conread position:
               
471-714
               

               
Cow position:
               
chr29:25874247-25874489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
471-718
               

               
Cow position:
               
chr29:9378855-9378615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
471-723
               

               
Cow position:
               
chr29:39329361-39329630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
471-729
               

               
Cow position:
               
chr29:39038044-39038306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
471-735
               

               
Cow position:
               
chr29:7285675-7285422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
141, 31
               

               
Conread position:
               
471-763
               

               
Cow position:
               
chr29:18878254-18878562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
471-764
               

               
Cow position:
               
chr29:20243581-20243874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
471-766
               

               
Cow position:
               
chr29:8669576-8669298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
471-770
               

               
Cow position:
               
chr29:7109567-7109264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 278
               

               
Conread position:
               
472-723
               

               
Cow position:
               
chr29:5666857-5667108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 22
               

               
Conread position:
               
472-763
               

               
Cow position:
               
chr29:31929207-31928921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
472-769
               

               
Cow position:
               
chr29:16196077-16195772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
473-626
               

               
Cow position:
               
chr29:29363823-29363669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
473-660
               

               
Cow position:
               
chr29:23678923-23678745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 96
               

               
Conread position:
               
473-666
               

               
Cow position:
               
chr29:38732380-38732183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
473-669
               

               
Cow position:
               
chr29:42646269-42646077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
473-669
               

               
Cow position:
               
chr29:42798175-42797983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
473-693
               

               
Cow position:
               
chr29:24026926-24026697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 216
               

               
Conread position:
               
473-728
               

               
Cow position:
               
chr29:25268357-25268098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
473-765
               

               
Cow position:
               
chr29:36522129-36522430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
474-579
               

               
Cow position:
               
chr29:2720833-2720939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
474-632
               

               
Cow position:
               
chr29:16164213-16164372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
474-638
               

               
Cow position:
               
chr29:14614815-14614979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
137, 75
               

               
Conread position:
               
474-645
               

               
Cow position:
               
chr29:24119274-24119449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
474-653
               

               
Cow position:
               
chr29:37316180-37316359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 28
               

               
Conread position:
               
474-675
               

               
Cow position:
               
chr29:16735447-16735245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
474-679
               

               
Cow position:
               
chr29:22018961-22019171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
474-680
               

               
Cow position:
               
chr29:19665750-19665958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
474-681
               

               
Cow position:
               
chr29:23954853-23954645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
474-685
               

               
Cow position:
               
chr29:8798790-8799004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
474-687
               

               
Cow position:
               
chr29:25288698-25288914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
94, 168
               

               
Conread position:
               
474-689
               

               
Cow position:
               
chr29:4647987-4648202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
474-690
               

               
Cow position:
               
chr29:29187733-29187950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
474-697
               

               
Cow position:
               
chr29:20087160-20087381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
137, 10
               

               
Conread position:
               
474-698
               

               
Cow position:
               
chr29:29578750-29578975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
474-708
               

               
Cow position:
               
chr29:42887191-42886965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 15
               

               
Conread position:
               
474-721
               

               
Cow position:
               
chr29:25949930-25950184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
474-722
               

               
Cow position:
               
chr29:22720422-22720677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
28, 104
               

               
Conread position:
               
474-723
               

               
Cow position:
               
chr29:29475033-29475283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
139, 15
               

               
Conread position:
               
474-725
               

               
Cow position:
               
chr29:27009646-27009388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
474-749
               

               
Cow position:
               
chr29:26275820-26275557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
474-769
               

               
Cow position:
               
chr29:16657911-16657620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
474-769
               

               
Cow position:
               
chr29:20770561-20770273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
474-769
               

               
Cow position:
               
chr29:25475153-25474850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
474-769
               

               
Cow position:
               
chr29:35677320-35677617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
474-769
               

               
Cow position:
               
chr29:41531073-41530777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
474-771
               

               
Cow position:
               
chr29:17154979-17154695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
475-583
               

               
Cow position:
               
chr29:28733889-28733997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
475-680
               

               
Cow position:
               
chr29:34356190-34355985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
475-684
               

               
Cow position:
               
chr29:4327804-4327605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
475-695
               

               
Cow position:
               
chr29:26211273-26211053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 119
               

               
Conread position:
               
475-697
               

               
Cow position:
               
chr29:8634870-8634653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
475-697
               

               
Cow position:
               
chr29:14577075-14576858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
475-722
               

               
Cow position:
               
chr29:7310883-7310651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
136, 93
               

               
Conread position:
               
475-724
               

               
Cow position:
               
chr29:26998801-26998565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
475-729
               

               
Cow position:
               
chr29:4070839-4070595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
475-731
               

               
Cow position:
               
chr29:29588704-29588961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
14, 124
               

               
Conread position:
               
475-763
               

               
Cow position:
               
chr29:34744410-34744686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
475-764
               

               
Cow position:
               
chr29:22175911-22175622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 167
               

               
Conread position:
               
475-769
               

               
Cow position:
               
chr29:10018789-10018506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
475-769
               

               
Cow position:
               
chr29:11397693-11397994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
101, 250
               

               
Conread position:
               
476-589
               

               
Cow position:
               
chr29:28616940-28616826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
476-612
               

               
Cow position:
               
chr29:659500-659367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
476-623
               

               
Cow position:
               
chr29:26777229-26777081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
476-626
               

               
Cow position:
               
chr29:6515652-6515502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
135, 122
               

               
Conread position:
               
476-635
               

               
Cow position:
               
chr29:34483406-34483567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
476-645
               

               
Cow position:
               
chr29:6441794-6441629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 19
               

               
Conread position:
               
476-653
               

               
Cow position:
               
chr29:22448093-22447914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
476-653
               

               
Cow position:
               
chr29:40112597-40112425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
476-659
               

               
Cow position:
               
chr29:38775833-38775657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
476-667
               

               
Cow position:
               
chr29:8605719-8605906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
476-673
               

               
Cow position:
               
chr29:30088834-30089032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 167
               

               
Conread position:
               
476-678
               

               
Cow position:
               
chr29:23262098-23262303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 135
               

               
Conread position:
               
476-679
               

               
Cow position:
               
chr29:5740070-5740269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
476-680
               

               
Cow position:
               
chr29:30681373-30681168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
476-684
               

               
Cow position:
               
chr29:29312324-29312535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
476-685
               

               
Cow position:
               
chr29:26563602-26563812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
476-686
               

               
Cow position:
               
chr29:25432672-25432464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
476-687
               

               
Cow position:
               
chr29:41014789-41014574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
476-692
               

               
Cow position:
               
chr29:29579899-29579675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
476-695
               

               
Cow position:
               
chr29:28087893-28087670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
134, 84
               

               
Conread position:
               
476-696
               

               
Cow position:
               
chr29:39534445-39534668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
476-697
               

               
Cow position:
               
chr29:4813561-4813338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
476-697
               

               
Cow position:
               
chr29:21018525-21018747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
476-698
               

               
Cow position:
               
chr29:14375659-14375883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
476-709
               

               
Cow position:
               
chr29:21932900-21933134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
476-711
               

               
Cow position:
               
chr29:33511508-33511744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
476-714
               

               
Cow position:
               
chr29:5830798-5831038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
476-714
               

               
Cow position:
               
chr29:8815919-8816158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 195
               

               
Conread position:
               
476-714
               

               
Cow position:
               
chr29:16272965-16272724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
476-719
               

               
Cow position:
               
chr29:34832174-34832408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
81, 137
               

               
Conread position:
               
476-722
               

               
Cow position:
               
chr29:12680375-12680130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
476-730
               

               
Cow position:
               
chr29:23637456-23637713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
476-731
               

               
Cow position:
               
chr29:363471-363214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
476-757
               

               
Cow position:
               
chr29:20910471-20910751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
135, 214
               

               
Conread position:
               
476-757
               

               
Cow position:
               
chr29:23577564-23577849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
476-757
               

               
Cow position:
               
chr29:25814615-25814896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
20, 185
               

               
Conread position:
               
476-757
               

               
Cow position:
               
chr29:28204483-28204208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 189
               

               
Conread position:
               
476-760
               

               
Cow position:
               
chr29:1008039-1007755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
476-762
               

               
Cow position:
               
chr29:42630336-42630058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
476-764
               

               
Cow position:
               
chr29:18754642-18754930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
476-764
               

               
Cow position:
               
chr29:22068524-22068811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 18
               

               
Conread position:
               
476-764
               

               
Cow position:
               
chr29:38347815-38348096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
179, 45
               

               
Conread position:
               
476-764
               

               
Cow position:
               
chr29:43183101-43183375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
476-769
               

               
Cow position:
               
chr29:5063361-5063077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
476-769
               

               
Cow position:
               
chr29:20925128-20924834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 268
               

               
Conread position:
               
476-769
               

               
Cow position:
               
chr29:23874681-23874387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 259
               

               
Conread position:
               
476-769
               

               
Cow position:
               
chr29:36249258-36248964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 127
               

               
Conread position:
               
476-772
               

               
Cow position:
               
chr29:3237128-3237428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 271
               

               
Conread position:
               
477-586
               

               
Cow position:
               
chr29:3704001-3704111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
477-658
               

               
Cow position:
               
chr29:30123286-30123466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
477-683
               

               
Cow position:
               
chr29:962124-961916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
477-683
               

               
Cow position:
               
chr29:14746999-14746793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
477-687
               

               
Cow position:
               
chr29:9800879-9800659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 171
               

               
Conread position:
               
477-697
               

               
Cow position:
               
chr29:32713382-32713160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
477-706
               

               
Cow position:
               
chr29:28478551-28478317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
477-707
               

               
Cow position:
               
chr29:27683748-27683963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
477-709
               

               
Cow position:
               
chr29:36781092-36781317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 97
               

               
Conread position:
               
477-714
               

               
Cow position:
               
chr29:23876621-23876852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
477-716
               

               
Cow position:
               
chr29:8163610-8163847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
477-722
               

               
Cow position:
               
chr29:11042661-11042402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
477-725
               

               
Cow position:
               
chr29:31982037-31981802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
477-725
               

               
Cow position:
               
chr29:35501449-35501683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
477-728
               

               
Cow position:
               
chr29:22534181-22533922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
477-739
               

               
Cow position:
               
chr29:27524616-27524879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
136, 39
               

               
Conread position:
               
477-740
               

               
Cow position:
               
chr29:18201005-18200740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 172
               

               
Conread position:
               
477-764
               

               
Cow position:
               
chr29:14112597-14112311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
200, 54
               

               
Conread position:
               
477-764
               

               
Cow position:
               
chr29:22518904-22519195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
477-766
               

               
Cow position:
               
chr29:4121075-4120781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
477-769
               

               
Cow position:
               
chr29:13373539-13373229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 273
               

               
Conread position:
               
477-769
               

               
Cow position:
               
chr29:32799486-32799778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
477-769
               

               
Cow position:
               
chr29:34297352-34297641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
478-672
               

               
Cow position:
               
chr29:936420-936231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
132, 95
               

               
Conread position:
               
478-675
               

               
Cow position:
               
chr29:11894917-11894719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
478-680
               

               
Cow position:
               
chr29:19061546-19061758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
478-685
               

               
Cow position:
               
chr29:14756125-14756330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
478-707
               

               
Cow position:
               
chr29:19363925-19363700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
134, 91
               

               
Conread position:
               
478-722
               

               
Cow position:
               
chr29:20626784-20626541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
478-728
               

               
Cow position:
               
chr29:29188877-29189127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
478-729
               

               
Cow position:
               
chr29:396618-396380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
478-742
               

               
Cow position:
               
chr29:5568710-5568443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
478-764
               

               
Cow position:
               
chr29:22162049-22162318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
134, 23
               

               
Conread position:
               
478-764
               

               
Cow position:
               
chr29:31786888-31786605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
136, 6
               

               
Conread position:
               
478-765
               

               
Cow position:
               
chr29:27668439-27668729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
478-769
               

               
Cow position:
               
chr29:29769135-29769421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
478-769
               

               
Cow position:
               
chr29:35292302-35292018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 6
               

               
Conread position:
               
478-769
               

               
Cow position:
               
chr29:35458554-35458843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 6
               

               
Conread position:
               
479-604
               

               
Cow position:
               
chr29:20604928-20605054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
479-653
               

               
Cow position:
               
chr29:36546567-36546739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 23
               

               
Conread position:
               
479-685
               

               
Cow position:
               
chr29:34668850-34669056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
479-695
               

               
Cow position:
               
chr29:25793358-25793147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
479-703
               

               
Cow position:
               
chr29:8979356-8979581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
75, 153
               

               
Conread position:
               
479-714
               

               
Cow position:
               
chr29:22648064-22647828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
479-714
               

               
Cow position:
               
chr29:28674485-28674723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
479-719
               

               
Cow position:
               
chr29:38754722-38754963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 107
               

               
Conread position:
               
479-764
               

               
Cow position:
               
chr29:27834209-27833924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
479-775
               

               
Cow position:
               
chr29:5046871-5046574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
480-645
               

               
Cow position:
               
chr29:33005201-33005032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
480-685
               

               
Cow position:
               
chr29:30216897-30217103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 91
               

               
Conread position:
               
480-724
               

               
Cow position:
               
chr29:9310820-9310572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 188
               

               
Conread position:
               
481-668
               

               
Cow position:
               
chr29:13091261-13091439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
481-761
               

               
Cow position:
               
chr29:29183936-29183660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
482-754
               

               
Cow position:
               
chr29:22166872-22167137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
482-769
               

               
Cow position:
               
chr29:26017288-26017572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
483-645
               

               
Cow position:
               
chr29:18577656-18577497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
483-673
               

               
Cow position:
               
chr29:17282273-17282091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
483-677
               

               
Cow position:
               
chr29:37771671-37771867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
483-690
               

               
Cow position:
               
chr29:32215914-32215713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
129, 18
               

               
Conread position:
               
483-696
               

               
Cow position:
               
chr29:38396575-38396360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
483-700
               

               
Cow position:
               
chr29:12890888-12890681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
483-706
               

               
Cow position:
               
chr29:20781231-20781002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
483-727
               

               
Cow position:
               
chr29:42363807-42364049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
163, 88
               

               
Conread position:
               
483-758
               

               
Cow position:
               
chr29:17236633-17236376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
238, 21
               

               
Conread position:
               
483-769
               

               
Cow position:
               
chr29:12025267-12025540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
484-588
               

               
Cow position:
               
chr29:25975317-25975423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
484-610
               

               
Cow position:
               
chr29:36080251-36080127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
484-616
               

               
Cow position:
               
chr29:6716301-6716434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
484-623
               

               
Cow position:
               
chr29:19742684-19742549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
484-640
               

               
Cow position:
               
chr29:4741178-4741335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
484-661
               

               
Cow position:
               
chr29:7414703-7414536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
484-661
               

               
Cow position:
               
chr29:14828018-14828193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
484-666
               

               
Cow position:
               
chr29:22776288-22776108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
484-678
               

               
Cow position:
               
chr29:24065893-24065704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
484-679
               

               
Cow position:
               
chr29:24614559-24614362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
484-680
               

               
Cow position:
               
chr29:22576967-22577163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 106
               

               
Conread position:
               
484-692
               

               
Cow position:
               
chr29:684968-685169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
484-696
               

               
Cow position:
               
chr29:42406893-42406693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
128, 59
               

               
Conread position:
               
484-697
               

               
Cow position:
               
chr29:31221953-31221750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
484-707
               

               
Cow position:
               
chr29:20256432-20256217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
6, 172
               

               
Conread position:
               
484-709
               

               
Cow position:
               
chr29:28420968-28420743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 179
               

               
Conread position:
               
484-714
               

               
Cow position:
               
chr29:16200265-16200496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
484-714
               

               
Cow position:
               
chr29:40610420-40610652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
484-716
               

               
Cow position:
               
chr29:30294660-30294885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
127, 175
               

               
Conread position:
               
484-721
               

               
Cow position:
               
chr29:25944084-25944328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
484-721
               

               
Cow position:
               
chr29:44684308-44684078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 97
               

               
Conread position:
               
484-724
               

               
Cow position:
               
chr29:377225-377468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
6, 183
               

               
Conread position:
               
484-728
               

               
Cow position:
               
chr29:29923366-29923603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
129, 18
               

               
Conread position:
               
484-729
               

               
Cow position:
               
chr29:5789226-5788995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
484-729
               

               
Cow position:
               
chr29:20526950-20527196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 169
               

               
Conread position:
               
484-760
               

               
Cow position:
               
chr29:22613635-22613365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
484-761
               

               
Cow position:
               
chr29:23220281-23220564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
484-761
               

               
Cow position:
               
chr29:27827755-27827484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
484-762
               

               
Cow position:
               
chr29:23698179-23697916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
484-763
               

               
Cow position:
               
chr29:27911803-27911527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 154
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr29:24035199-24035467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
484-764
               

               
Cow position:
               
chr29:27858999-27858727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
484-766
               

               
Cow position:
               
chr29:17462568-17462853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 93
               

               
Conread position:
               
484-768
               

               
Cow position:
               
chr29:32656648-32656362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 261
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr29:3711587-3711320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 144
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr29:4520545-4520265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 99
               

               
Conread position:
               
484-769
               

               
Cow position:
               
chr29:29552058-29551782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 177
               

               
Conread position:
               
484-775
               

               
Cow position:
               
chr29:2056272-2055980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
485-658
               

               
Cow position:
               
chr29:24660887-24660723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
125, 87
               

               
Conread position:
               
485-678
               

               
Cow position:
               
chr29:28715021-28715215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 168
               

               
Conread position:
               
485-687
               

               
Cow position:
               
chr29:13558547-13558342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
485-695
               

               
Cow position:
               
chr29:22735238-22735447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 98
               

               
Conread position:
               
485-726
               

               
Cow position:
               
chr29:31934589-31934349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
485-730
               

               
Cow position:
               
chr29:33321559-33321316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
129, 188
               

               
Conread position:
               
486-661
               

               
Cow position:
               
chr29:2414539-2414717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
486-670
               

               
Cow position:
               
chr29:10191837-10192013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
486-680
               

               
Cow position:
               
chr29:37293238-37293055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
486-684
               

               
Cow position:
               
chr29:27042480-27042288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
486-701
               

               
Cow position:
               
chr29:15798160-15797947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
486-715
               

               
Cow position:
               
chr29:501411-501180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
487-580
               

               
Cow position:
               
chr29:5147843-5147750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
487-660
               

               
Cow position:
               
chr29:11050864-11050701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
487-661
               

               
Cow position:
               
chr29:33143149-33143319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
487-680
               

               
Cow position:
               
chr29:43099541-43099729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
487-684
               

               
Cow position:
               
chr29:20592324-20592128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 116
               

               
Conread position:
               
487-764
               

               
Cow position:
               
chr29:22028755-22029023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
487-764
               

               
Cow position:
               
chr29:26259684-26259412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
487-769
               

               
Cow position:
               
chr29:4492640-4492370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
487-769
               

               
Cow position:
               
chr29:28396904-28396613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
488-646
               

               
Cow position:
               
chr29:10994718-10994562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
488-676
               

               
Cow position:
               
chr29:26631255-26631061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
488-709
               

               
Cow position:
               
chr29:21666294-21666074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
488-722
               

               
Cow position:
               
chr29:22734899-22735131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
488-749
               

               
Cow position:
               
chr29:15947376-15947117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 226
               

               
Conread position:
               
488-769
               

               
Cow position:
               
chr29:8926243-8926535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
489-610
               

               
Cow position:
               
chr29:41844044-41844165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
489-644
               

               
Cow position:
               
chr29:35281678-35281516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
489-651
               

               
Cow position:
               
chr29:41094322-41094162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
122, 39
               

               
Conread position:
               
489-661
               

               
Cow position:
               
chr29:6517434-6517264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
122, 91
               

               
Conread position:
               
489-662
               

               
Cow position:
               
chr29:37794970-37794796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
489-677
               

               
Cow position:
               
chr29:44895195-44895383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
489-691
               

               
Cow position:
               
chr29:22335019-22335224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
489-694
               

               
Cow position:
               
chr29:9078325-9078527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 13
               

               
Conread position:
               
489-696
               

               
Cow position:
               
chr29:35435064-35434857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
489-697
               

               
Cow position:
               
chr29:29546223-29546018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
489-699
               

               
Cow position:
               
chr29:4023201-4023001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
489-709
               

               
Cow position:
               
chr29:7624369-7624166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
489-712
               

               
Cow position:
               
chr29:36586775-36586550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
489-714
               

               
Cow position:
               
chr29:465188-465417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
489-714
               

               
Cow position:
               
chr29:3549811-3549585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
489-714
               

               
Cow position:
               
chr29:30827614-30827388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
489-716
               

               
Cow position:
               
chr29:3685315-3685539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
93, 102
               

               
Conread position:
               
489-719
               

               
Cow position:
               
chr29:42444805-42444584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
489-720
               

               
Cow position:
               
chr29:31651608-31651387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
166, 92
               

               
Conread position:
               
489-723
               

               
Cow position:
               
chr29:23155441-23155202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 203
               

               
Conread position:
               
489-724
               

               
Cow position:
               
chr29:39280423-39280193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
489-726
               

               
Cow position:
               
chr29:9721508-9721271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
489-757
               

               
Cow position:
               
chr29:16290929-16290666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 65
               

               
Conread position:
               
489-764
               

               
Cow position:
               
chr29:24624448-24624181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
489-764
               

               
Cow position:
               
chr29:30366849-30367123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
489-764
               

               
Cow position:
               
chr29:31674837-31674563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 94
               

               
Conread position:
               
489-768
               

               
Cow position:
               
chr29:415023-414742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
489-769
               

               
Cow position:
               
chr29:3826172-3825901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
489-769
               

               
Cow position:
               
chr29:8292707-8292986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 200
               

               
Conread position:
               
489-769
               

               
Cow position:
               
chr29:28805961-28805687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
223, 122
               

               
Conread position:
               
489-769
               

               
Cow position:
               
chr29:29942520-29942800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 56
               

               
Conread position:
               
490-586
               

               
Cow position:
               
chr29:13085858-13085761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
490-659
               

               
Cow position:
               
chr29:7040664-7040835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
490-680
               

               
Cow position:
               
chr29:30707108-30706917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
490-699
               

               
Cow position:
               
chr29:44901456-44901669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
121, 88
               

               
Conread position:
               
490-710
               

               
Cow position:
               
chr29:36531070-36530853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
490-712
               

               
Cow position:
               
chr29:16279182-16278972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
490-712
               

               
Cow position:
               
chr29:19176710-19176929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
490-723
               

               
Cow position:
               
chr29:1615132-1614904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
490-724
               

               
Cow position:
               
chr29:27835521-27835287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 112
               

               
Conread position:
               
490-725
               

               
Cow position:
               
chr29:25737215-25737443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
490-757
               

               
Cow position:
               
chr29:32733507-32733240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
490-762
               

               
Cow position:
               
chr29:5994884-5995164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
490-763
               

               
Cow position:
               
chr29:27926979-27926710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
490-763
               

               
Cow position:
               
chr29:31092653-31092384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
490-764
               

               
Cow position:
               
chr29:2744064-2744337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 96
               

               
Conread position:
               
490-764
               

               
Cow position:
               
chr29:11434317-11434057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
122, 48
               

               
Conread position:
               
490-764
               

               
Cow position:
               
chr29:40891503-40891761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
490-765
               

               
Cow position:
               
chr29:39131252-39131530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
23, 178
               

               
Conread position:
               
490-769
               

               
Cow position:
               
chr29:4085501-4085249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
490-769
               

               
Cow position:
               
chr29:28587649-28587379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 98
               

               
Conread position:
               
491-625
               

               
Cow position:
               
chr29:774194-774059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
491-667
               

               
Cow position:
               
chr29:37990783-37990970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
491-688
               

               
Cow position:
               
chr29:31107802-31107995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
491-692
               

               
Cow position:
               
chr29:1959751-1959941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
491-697
               

               
Cow position:
               
chr29:26052545-26052349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
491-728
               

               
Cow position:
               
chr29:26602403-26602161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
491-769
               

               
Cow position:
               
chr29:749687-749980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
491-769
               

               
Cow position:
               
chr29:13028654-13028367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 181
               

               
Conread position:
               
491-769
               

               
Cow position:
               
chr29:25092308-25092042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
491-769
               

               
Cow position:
               
chr29:36220747-36220456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
492-639
               

               
Cow position:
               
chr29:8841248-8841388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
119, 9
               

               
Conread position:
               
492-652
               

               
Cow position:
               
chr29:29296591-29296438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
492-677
               

               
Cow position:
               
chr29:10203972-10203791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
492-682
               

               
Cow position:
               
chr29:39639042-39638856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
492-693
               

               
Cow position:
               
chr29:43088509-43088314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
492-696
               

               
Cow position:
               
chr29:19420417-19420613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
492-725
               

               
Cow position:
               
chr29:28813769-28814009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
492-761
               

               
Cow position:
               
chr29:5176171-5175895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
492-761
               

               
Cow position:
               
chr29:11612050-11611777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 226
               

               
Conread position:
               
492-764
               

               
Cow position:
               
chr29:19762466-19762205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
492-764
               

               
Cow position:
               
chr29:24952890-24952623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
108, 75
               

               
Conread position:
               
492-764
               

               
Cow position:
               
chr29:30227077-30227338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 137
               

               
Conread position:
               
492-764
               

               
Cow position:
               
chr29:38581195-38580912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 180
               

               
Conread position:
               
493-696
               

               
Cow position:
               
chr29:2730079-2730286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
68, 174
               

               
Conread position:
               
493-708
               

               
Cow position:
               
chr29:14552903-14552686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
493-726
               

               
Cow position:
               
chr29:35084021-35084252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
493-729
               

               
Cow position:
               
chr29:21645519-21645285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 146
               

               
Conread position:
               
493-769
               

               
Cow position:
               
chr29:14501797-14501521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
124, 250
               

               
Conread position:
               
494-620
               

               
Cow position:
               
chr29:23209531-23209402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
494-659
               

               
Cow position:
               
chr29:25907453-25907283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
84, 73
               

               
Conread position:
               
494-691
               

               
Cow position:
               
chr29:31497336-31497139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 87
               

               
Conread position:
               
494-713
               

               
Cow position:
               
chr29:5302025-5302245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
102, 159
               

               
Conread position:
               
494-723
               

               
Cow position:
               
chr29:44937794-44938017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
494-725
               

               
Cow position:
               
chr29:17110154-17109931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
494-728
               

               
Cow position:
               
chr29:2188154-2188388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
117, 93
               

               
Conread position:
               
494-748
               

               
Cow position:
               
chr29:35259182-35258933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
494-764
               

               
Cow position:
               
chr29:23389365-23389621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
494-769
               

               
Cow position:
               
chr29:36952111-36952370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
238, 78
               

               
Conread position:
               
495-604
               

               
Cow position:
               
chr29:7452441-7452334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
495-639
               

               
Cow position:
               
chr29:2070996-2071147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
495-670
               

               
Cow position:
               
chr29:11081194-11081370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
495-671
               

               
Cow position:
               
chr29:22652519-22652348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
495-702
               

               
Cow position:
               
chr29:17436947-17436743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
495-729
               

               
Cow position:
               
chr29:26540340-26540573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 88
               

               
Conread position:
               
495-764
               

               
Cow position:
               
chr29:19428850-19428594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
495-764
               

               
Cow position:
               
chr29:20167623-20167357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
495-764
               

               
Cow position:
               
chr29:29057379-29057114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
495-764
               

               
Cow position:
               
chr29:40583985-40583728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
495-765
               

               
Cow position:
               
chr29:26779076-26778811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
117, 70
               

               
Conread position:
               
495-769
               

               
Cow position:
               
chr29:17297338-17297064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 248
               

               
Conread position:
               
495-770
               

               
Cow position:
               
chr29:18449938-18450206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 94
               

               
Conread position:
               
495-781
               

               
Cow position:
               
chr29:1306663-1306944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
118, 69
               

               
Conread position:
               
496-654
               

               
Cow position:
               
chr29:17301970-17301803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
496-679
               

               
Cow position:
               
chr29:34274175-34274359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
496-685
               

               
Cow position:
               
chr29:20685370-20685180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
496-716
               

               
Cow position:
               
chr29:32655895-32656112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
496-723
               

               
Cow position:
               
chr29:28979317-28979526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
496-729
               

               
Cow position:
               
chr29:36329713-36329472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 110
               

               
Conread position:
               
496-752
               

               
Cow position:
               
chr29:19756636-19756381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
496-764
               

               
Cow position:
               
chr29:24293069-24292805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 51
               

               
Conread position:
               
496-769
               

               
Cow position:
               
chr29:22777982-22778247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
496-769
               

               
Cow position:
               
chr29:42771852-42771579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
496-772
               

               
Cow position:
               
chr29:44139046-44139320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
118, 87
               

               
Conread position:
               
497-669
               

               
Cow position:
               
chr29:27997050-27997223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 107
               

               
Conread position:
               
497-687
               

               
Cow position:
               
chr29:36697955-36697766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
497-725
               

               
Cow position:
               
chr29:5893044-5892812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
497-769
               

               
Cow position:
               
chr29:22936483-22936200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
498-700
               

               
Cow position:
               
chr29:26299564-26299772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
498-769
               

               
Cow position:
               
chr29:24046195-24045923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
499-668
               

               
Cow position:
               
chr29:17663562-17663733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
499-701
               

               
Cow position:
               
chr29:15796680-15796481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
499-764
               

               
Cow position:
               
chr29:36632664-36632927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
113, 79
               

               
Conread position:
               
500-695
               

               
Cow position:
               
chr29:41422714-41422906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
111, 160
               

               
Conread position:
               
500-728
               

               
Cow position:
               
chr29:29324226-29324455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
501-588
               

               
Cow position:
               
chr29:9924379-9924466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
501-634
               

               
Cow position:
               
chr29:4602935-4603079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
501-651
               

               
Cow position:
               
chr29:23734892-23735043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
501-668
               

               
Cow position:
               
chr29:16561580-16561742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
501-670
               

               
Cow position:
               
chr29:30743516-30743690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 135
               

               
Conread position:
               
501-672
               

               
Cow position:
               
chr29:42405143-42404971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
501-679
               

               
Cow position:
               
chr29:40763502-40763677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 83
               

               
Conread position:
               
501-680
               

               
Cow position:
               
chr29:35737123-35737311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
501-683
               

               
Cow position:
               
chr29:23819190-23819377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
501-689
               

               
Cow position:
               
chr29:23142138-23142327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
110, 183
               

               
Conread position:
               
501-690
               

               
Cow position:
               
chr29:26539425-26539241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
110, 76
               

               
Conread position:
               
501-694
               

               
Cow position:
               
chr29:5953662-5953857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
501-695
               

               
Cow position:
               
chr29:19187220-19187027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
111, 80
               

               
Conread position:
               
501-696
               

               
Cow position:
               
chr29:26411276-26411469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
501-698
               

               
Cow position:
               
chr29:4441011-4441207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 83
               

               
Conread position:
               
501-701
               

               
Cow position:
               
chr29:7954770-7954972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
80, 96
               

               
Conread position:
               
501-716
               

               
Cow position:
               
chr29:24187869-24188085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
501-717
               

               
Cow position:
               
chr29:3293137-3292927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
501-737
               

               
Cow position:
               
chr29:23711710-23711953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
501-739
               

               
Cow position:
               
chr29:5520290-5520528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
501-739
               

               
Cow position:
               
chr29:6756178-6755954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
501-759
               

               
Cow position:
               
chr29:4419021-4418765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 222
               

               
Conread position:
               
501-763
               

               
Cow position:
               
chr29:23812854-23813102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
113, 33
               

               
Conread position:
               
501-763
               

               
Cow position:
               
chr29:40994685-40994954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 170
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr29:5408948-5409205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr29:17222610-17222348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr29:34745467-34745726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr29:38440451-38440178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr29:40097175-40096898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
501-769
               

               
Cow position:
               
chr29:22690421-22690156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
110, 230
               

               
Conread position:
               
501-769
               

               
Cow position:
               
chr29:28195339-28195583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
502-684
               

               
Cow position:
               
chr29:4484290-4484112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
502-698
               

               
Cow position:
               
chr29:629730-629536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
502-716
               

               
Cow position:
               
chr29:7955795-7956010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 128
               

               
Conread position:
               
502-722
               

               
Cow position:
               
chr29:16652351-16652124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 151
               

               
Conread position:
               
502-730
               

               
Cow position:
               
chr29:38858019-38858247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
502-761
               

               
Cow position:
               
chr29:34358786-34359043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
502-764
               

               
Cow position:
               
chr29:11916014-11915755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
502-764
               

               
Cow position:
               
chr29:31489517-31489256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 204
               

               
Conread position:
               
502-764
               

               
Cow position:
               
chr29:40117758-40117505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
502-769
               

               
Cow position:
               
chr29:14838614-14838879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
503-762
               

               
Cow position:
               
chr29:1011401-1011637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
503-764
               

               
Cow position:
               
chr29:35405598-35405857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
109, 169
               

               
Conread position:
               
504-722
               

               
Cow position:
               
chr29:11227190-11227415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
504-725
               

               
Cow position:
               
chr29:21706206-21706425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 169
               

               
Conread position:
               
505-686
               

               
Cow position:
               
chr29:735788-735606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
505-764
               

               
Cow position:
               
chr29:21508157-21508415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 216
               

               
Conread position:
               
506-657
               

               
Cow position:
               
chr29:30920211-30920364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
506-680
               

               
Cow position:
               
chr29:935115-934941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
506-697
               

               
Cow position:
               
chr29:31211799-31211618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
506-729
               

               
Cow position:
               
chr29:30681514-30681742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
506-763
               

               
Cow position:
               
chr29:45589412-45589655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
506-769
               

               
Cow position:
               
chr29:13639180-13639440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
506-781
               

               
Cow position:
               
chr29:21443152-21443423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
508-620
               

               
Cow position:
               
chr29:35663729-35663843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
508-645
               

               
Cow position:
               
chr29:7143486-7143346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
508-679
               

               
Cow position:
               
chr29:23991642-23991813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
104, 139
               

               
Conread position:
               
508-682
               

               
Cow position:
               
chr29:22128051-22127884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
508-706
               

               
Cow position:
               
chr29:20772232-20772432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
508-714
               

               
Cow position:
               
chr29:4460313-4460107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 180
               

               
Conread position:
               
508-720
               

               
Cow position:
               
chr29:24365710-24365921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
508-747
               

               
Cow position:
               
chr29:11844000-11844242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 92
               

               
Conread position:
               
508-758
               

               
Cow position:
               
chr29:5121674-5121928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 220
               

               
Conread position:
               
509-701
               

               
Cow position:
               
chr29:23913211-23913398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
509-708
               

               
Cow position:
               
chr29:20933901-20933700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 112
               

               
Conread position:
               
509-713
               

               
Cow position:
               
chr29:19125516-19125306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 207
               

               
Conread position:
               
509-714
               

               
Cow position:
               
chr29:23114814-23115019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
101, 81
               

               
Conread position:
               
509-724
               

               
Cow position:
               
chr29:7125007-7124784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
509-736
               

               
Cow position:
               
chr29:4423264-4423479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
509-769
               

               
Cow position:
               
chr29:39111138-39111385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
231, 65
               

               
Conread position:
               
509-773
               

               
Cow position:
               
chr29:732796-732544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
510-620
               

               
Cow position:
               
chr29:5217895-5218007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
510-679
               

               
Cow position:
               
chr29:20177505-20177687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
510-680
               

               
Cow position:
               
chr29:3538500-3538660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
510-693
               

               
Cow position:
               
chr29:8001252-8001424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
511-728
               

               
Cow position:
               
chr29:40791481-40791278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
511-758
               

               
Cow position:
               
chr29:43544421-43544661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
511-764
               

               
Cow position:
               
chr29:12783771-12784021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
512-684
               

               
Cow position:
               
chr29:33393871-33393690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
512-741
               

               
Cow position:
               
chr29:18556850-18556622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
513-709
               

               
Cow position:
               
chr29:4053162-4053353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
513-722
               

               
Cow position:
               
chr29:5109001-5109210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
513-722
               

               
Cow position:
               
chr29:5769973-5769767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
513-729
               

               
Cow position:
               
chr29:19392180-19392387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 8
               

               
Conread position:
               
514-709
               

               
Cow position:
               
chr29:23825031-23825223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
514-711
               

               
Cow position:
               
chr29:22723777-22723586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
514-754
               

               
Cow position:
               
chr29:44988623-44988844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
515-729
               

               
Cow position:
               
chr29:38582150-38581940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
95, 163
               

               
Conread position:
               
516-688
               

               
Cow position:
               
chr29:30742768-30742595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
516-714
               

               
Cow position:
               
chr29:19389659-19389460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
517-669
               

               
Cow position:
               
chr29:28257320-28257168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
517-677
               

               
Cow position:
               
chr29:8926780-8926942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
517-771
               

               
Cow position:
               
chr29:17168583-17168333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
193, 95
               

               
Conread position:
               
517-772
               

               
Cow position:
               
chr29:8176835-8176578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
96, 217
               

               
Conread position:
               
518-691
               

               
Cow position:
               
chr29:11116486-11116656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
519-762
               

               
Cow position:
               
chr29:7621382-7621628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
520-714
               

               
Cow position:
               
chr29:29973838-29974032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 172
               

               
Conread position:
               
520-725
               

               
Cow position:
               
chr29:27619056-27618852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 128
               

               
Conread position:
               
520-768
               

               
Cow position:
               
chr29:5275076-5275323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
204, 223
               

               
Conread position:
               
520-769
               

               
Cow position:
               
chr29:22184436-22184188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
92, 159
               

               
Conread position:
               
524-689
               

               
Cow position:
               
chr29:7425802-7425637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 114
               

               
Conread position:
               
525-695
               

               
Cow position:
               
chr29:5043552-5043381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
526-714
               

               
Cow position:
               
chr29:3100096-3100285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
526-762
               

               
Cow position:
               
chr29:28775294-28775523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
526-769
               

               
Cow position:
               
chr29:86835-87086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
526-769
               

               
Cow position:
               
chr29:29795211-29795455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 194
               

               
Conread position:
               
527-688
               

               
Cow position:
               
chr29:42865728-42865567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
527-712
               

               
Cow position:
               
chr29:24051210-24051397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
527-714
               

               
Cow position:
               
chr29:12900382-12900569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
86, 110
               

               
Conread position:
               
528-664
               

               
Cow position:
               
chr29:29447551-29447413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
529-729
               

               
Cow position:
               
chr29:42262856-42263060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
529-768
               

               
Cow position:
               
chr29:30713551-30713778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
530-670
               

               
Cow position:
               
chr29:28279120-28279261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
530-761
               

               
Cow position:
               
chr29:24429672-24429906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
532-769
               

               
Cow position:
               
chr29:856237-856483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 220
               

               
Conread position:
               
534-731
               

               
Cow position:
               
chr29:41082186-41082386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr29:109841-109632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
536-645
               

               
Cow position:
               
chr29:18211628-18211738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
538-686
               

               
Cow position:
               
chr29:5653099-5652950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
545-696
               

               
Cow position:
               
chr29:19059927-19060082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
547-723
               

               
Cow position:
               
chr29:25088893-25088719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
547-764
               

               
Cow position:
               
chr29:7966393-7966174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
552-763
               

               
Cow position:
               
chr29:12625834-12626043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
552-769
               

               
Cow position:
               
chr29:31814086-31813878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
553-721
               

               
Cow position:
               
chr29:11527647-11527815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
553-725
               

               
Cow position:
               
chr29:42883813-42883990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
554-726
               

               
Cow position:
               
chr29:21509993-21509818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
555-729
               

               
Cow position:
               
chr29:20260723-20260903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
59, 6
               

               
Conread position:
               
556-769
               

               
Cow position:
               
chr29:6293339-6293544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
557-763
               

               
Cow position:
               
chr29:6286020-6286222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 172
               

               
Conread position:
               
557-764
               

               
Cow position:
               
chr29:30350791-30351000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
558-762
               

               
Cow position:
               
chr29:29512002-29512204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
559-676
               

               
Cow position:
               
chr29:28242205-28242321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
559-705
               

               
Cow position:
               
chr29:16672630-16672482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
559-763
               

               
Cow position:
               
chr29:13867073-13867276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
560-680
               

               
Cow position:
               
chr29:29940779-29940656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
560-704
               

               
Cow position:
               
chr29:17022287-17022142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
560-725
               

               
Cow position:
               
chr29:40298885-40299049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
560-728
               

               
Cow position:
               
chr29:16365748-16365919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 163
               

               
Conread position:
               
560-764
               

               
Cow position:
               
chr29:18403980-18404180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
51, 95
               

               
Conread position:
               
561-769
               

               
Cow position:
               
chr29:21941738-21941529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 154
               

               
Conread position:
               
563-769
               

               
Cow position:
               
chr29:5186358-5186567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
564-680
               

               
Cow position:
               
chr29:26943042-26942926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
564-710
               

               
Cow position:
               
chr29:1219998-1220145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
564-764
               

               
Cow position:
               
chr29:17409468-17409270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 164
               

               
Conread position:
               
565-684
               

               
Cow position:
               
chr29:32301883-32301763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
565-764
               

               
Cow position:
               
chr29:29149803-29149605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
566-730
               

               
Cow position:
               
chr29:34687964-34687801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
566-761
               

               
Cow position:
               
chr29:25333330-25333526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
566-764
               

               
Cow position:
               
chr29:13372794-13372600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
566-764
               

               
Cow position:
               
chr29:32290743-32290543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 169
               

               
Conread position:
               
566-769
               

               
Cow position:
               
chr29:11647225-11647019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 137
               

               
Conread position:
               
566-779
               

               
Cow position:
               
chr29:32926234-32926016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
567-703
               

               
Cow position:
               
chr29:20604505-20604645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
567-764
               

               
Cow position:
               
chr29:5210621-5210421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
569-725
               

               
Cow position:
               
chr29:42886670-42886514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
569-764
               

               
Cow position:
               
chr29:12310136-12309944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
569-764
               

               
Cow position:
               
chr29:26653915-26654105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
569-764
               

               
Cow position:
               
chr29:28166094-28166280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
569-784
               

               
Cow position:
               
chr29:40853056-40852844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
571-743
               

               
Cow position:
               
chr29:30918675-30918503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
574-772
               

               
Cow position:
               
chr29:706834-707024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
577-722
               

               
Cow position:
               
chr29:43252551-43252697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
582-715
               

               
Cow position:
               
chr29:34517376-34517502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
582-762
               

               
Cow position:
               
chr29:27562878-27563055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
583-769
               

               
Cow position:
               
chr29:11053745-11053929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
586-701
               

               
Cow position:
               
chr29:19244348-19244464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
586-725
               

               
Cow position:
               
chr29:27819329-27819190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
586-769
               

               
Cow position:
               
chr29:9912286-9912102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
592-758
               

               
Cow position:
               
chr29:1229712-1229546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
592-762
               

               
Cow position:
               
chr29:24578968-24578796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
592-769
               

               
Cow position:
               
chr29:27873706-27873534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 139
               

               
Conread position:
               
594-763
               

               
Cow position:
               
chr29:26416454-26416287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
594-764
               

               
Cow position:
               
chr29:463549-463723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
595-740
               

               
Cow position:
               
chr29:8686432-8686287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
595-764
               

               
Cow position:
               
chr29:18012660-18012489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 153
               

               
Conread position:
               
595-769
               

               
Cow position:
               
chr29:19821385-19821217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
596-695
               

               
Cow position:
               
chr29:39285596-39285496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
596-769
               

               
Cow position:
               
chr29:28868744-28868566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 170
               

               
Conread position:
               
598-763
               

               
Cow position:
               
chr29:9638221-9638381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
599-769
               

               
Cow position:
               
chr29:39567780-39567617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
601-742
               

               
Cow position:
               
chr29:19558923-19559065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
602-769
               

               
Cow position:
               
chr29:32521965-32521799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
610-769
               

               
Cow position:
               
chr29:41365195-41365042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
612-764
               

               
Cow position:
               
chr29:868859-868710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
612-769
               

               
Cow position:
               
chr29:4051907-4052060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
615-764
               

               
Cow position:
               
chr29:36830439-36830294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
621-764
               

               
Cow position:
               
chr29:17668562-17668424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
623-764
               

               
Cow position:
               
chr29:2071496-2071638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
630-768
               

               
Cow position:
               
chr29:9454992-9455126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
630-771
               

               
Cow position:
               
chr29:11720033-11719892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 103
               

               
Conread position:
               
632-769
               

               
Cow position:
               
chr29:13487015-13486879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
650-769
               

               
Cow position:
               
chr29:24119694-24119808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               
Show alignments to all cow chromosomes.