Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8041I01.3 | 
| Conread position: | 65-772 | 
| Cow position: | chr3:31207487-31206780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 710 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 472, 691 | 
| Conread position: | 367-760 | 
| Cow position: | chr3:59630194-59630585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 14, 142 | 
| Conread position: | 398-764 | 
| Cow position: | chr3:3985591-3985240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 22 | 
| Conread position: | 406-618 | 
| Cow position: | chr3:78201912-78201697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 36, 24 | 
| Conread position: | 410-769 | 
| Cow position: | chr3:6403683-6403329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 55, 15 | 
| Conread position: | 435-772 | 
| Cow position: | chr3:23920196-23920524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 176, 28 | 
| Conread position: | 440-763 | 
| Cow position: | chr3:61170044-61169707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 42, 19 | 
| Conread position: | 442-769 | 
| Cow position: | chr3:55819977-55819658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 54 | 
| Conread position: | 446-698 | 
| Cow position: | chr3:3401767-3401523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 8, 38 | 
| Conread position: | 447-630 | 
| Cow position: | chr3:82121405-82121588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 48, 59 | 
| Conread position: | 447-667 | 
| Cow position: | chr3:24724283-24724507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 449-697 | 
| Cow position: | chr3:79730741-79730493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 41, 24 | 
| Conread position: | 449-698 | 
| Cow position: | chr3:44534313-44534555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 144, 44 | 
| Conread position: | 449-769 | 
| Cow position: | chr3:25691022-25690700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 132, 38 | 
| Conread position: | 450-682 | 
| Cow position: | chr3:4086626-4086872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 452-726 | 
| Cow position: | chr3:54903787-54903520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 159, 231 | 
| Conread position: | 453-610 | 
| Cow position: | chr3:66564005-66563847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 15, 51 | 
| Conread position: | 453-735 | 
| Cow position: | chr3:6299677-6299397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 45, 22 | 
| Conread position: | 454-680 | 
| Cow position: | chr3:62186376-62186145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 37, 30 | 
| Conread position: | 454-710 | 
| Cow position: | chr3:13240856-13241112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 38, 10 | 
| Conread position: | 454-711 | 
| Cow position: | chr3:7581500-7581754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 21, 31 | 
| Conread position: | 456-717 | 
| Cow position: | chr3:35624328-35624587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 456-771 | 
| Cow position: | chr3:53738964-53739280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 37, 136 | 
| Conread position: | 457-714 | 
| Cow position: | chr3:71393659-71393395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 457-761 | 
| Cow position: | chr3:59605053-59604760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 36 | 
| Conread position: | 458-692 | 
| Cow position: | chr3:8775535-8775300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 33, 145 | 
| Conread position: | 462-764 | 
| Cow position: | chr3:23734879-23735188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 149, 118 | 
| Conread position: | 463-769 | 
| Cow position: | chr3:32787671-32787367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 126, 92 | 
| Conread position: | 464-637 | 
| Cow position: | chr3:53836502-53836670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 143, 107 | 
| Conread position: | 464-749 | 
| Cow position: | chr3:79824713-79824995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 465-645 | 
| Cow position: | chr3:69849092-69849264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 146, 37 | 
| Conread position: | 465-679 | 
| Cow position: | chr3:20663334-20663554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 465-689 | 
| Cow position: | chr3:27286722-27286503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 144, 108 | 
| Conread position: | 465-696 | 
| Cow position: | chr3:22899527-22899763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 146, 7 | 
| Conread position: | 465-701 | 
| Cow position: | chr3:15786773-15786536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 37, 10 | 
| Conread position: | 465-715 | 
| Cow position: | chr3:3556755-3556504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 23 | 
| Conread position: | 465-763 | 
| Cow position: | chr3:55318691-55318989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 224, 121 | 
| Conread position: | 465-764 | 
| Cow position: | chr3:72342462-72342157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 273 | 
| Conread position: | 465-769 | 
| Cow position: | chr3:33330046-33329721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 9, 288 | 
| Conread position: | 465-769 | 
| Cow position: | chr3:48253084-48252792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 18 | 
| Conread position: | 466-680 | 
| Cow position: | chr3:19044563-19044772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 145, 36 | 
| Conread position: | 466-709 | 
| Cow position: | chr3:31555143-31554915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 16, 128 | 
| Conread position: | 466-727 | 
| Cow position: | chr3:30941008-30940749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 118, 23 | 
| Conread position: | 466-727 | 
| Cow position: | chr3:38864325-38864073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 14, 89 | 
| Conread position: | 466-764 | 
| Cow position: | chr3:50615064-50615357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 145, 17 | 
| Conread position: | 466-764 | 
| Cow position: | chr3:70676433-70676137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 9, 18 | 
| Conread position: | 467-677 | 
| Cow position: | chr3:635384-635174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 30, 72 | 
| Conread position: | 467-685 | 
| Cow position: | chr3:15955728-15955510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 115, 35 | 
| Conread position: | 467-694 | 
| Cow position: | chr3:31793677-31793904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 144, 35 | 
| Conread position: | 467-709 | 
| Cow position: | chr3:18831622-18831386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 9 | 
| Conread position: | 467-769 | 
| Cow position: | chr3:73467829-73467531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 15, 29 | 
| Conread position: | 468-610 | 
| Cow position: | chr3:75974874-75975017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 468-630 | 
| Cow position: | chr3:55271794-55271948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 143, 32 | 
| Conread position: | 468-658 | 
| Cow position: | chr3:33460395-33460593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 29, 16 | 
| Conread position: | 468-659 | 
| Cow position: | chr3:70319599-70319790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 119, 49 | 
| Conread position: | 468-683 | 
| Cow position: | chr3:36668964-36669173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 22, 84 | 
| Conread position: | 468-685 | 
| Cow position: | chr3:41510779-41510565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 144, 16 | 
| Conread position: | 468-708 | 
| Cow position: | chr3:5551601-5551847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 468-769 | 
| Cow position: | chr3:26992777-26992474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 144, 277 | 
| Conread position: | 468-769 | 
| Cow position: | chr3:52419149-52418854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 93, 21 | 
| Conread position: | 469-677 | 
| Cow position: | chr3:76300978-76300767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 469-679 | 
| Cow position: | chr3:53428716-53428922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 141, 25 | 
| Conread position: | 469-696 | 
| Cow position: | chr3:65308247-65308476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 160 | 
| Conread position: | 469-706 | 
| Cow position: | chr3:80329519-80329281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 20, 119 | 
| Conread position: | 469-714 | 
| Cow position: | chr3:41129916-41129671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 144, 20 | 
| Conread position: | 469-715 | 
| Cow position: | chr3:80709667-80709908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 144, 42 | 
| Conread position: | 469-724 | 
| Cow position: | chr3:51329027-51329281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 21, 194 | 
| Conread position: | 469-725 | 
| Cow position: | chr3:57776997-57776749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 142, 18 | 
| Conread position: | 469-728 | 
| Cow position: | chr3:59391922-59392173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 143, 173 | 
| Conread position: | 469-730 | 
| Cow position: | chr3:1788144-1787878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 469-761 | 
| Cow position: | chr3:36375333-36375626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 102 | 
| Conread position: | 469-769 | 
| Cow position: | chr3:21014758-21015053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 19 | 
| Conread position: | 470-602 | 
| Cow position: | chr3:32689996-32690125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 470-606 | 
| Cow position: | chr3:18177473-18177336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 470-622 | 
| Cow position: | chr3:23733267-23733420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 32, 55 | 
| Conread position: | 470-645 | 
| Cow position: | chr3:30682825-30682997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 32, 89 | 
| Conread position: | 470-661 | 
| Cow position: | chr3:82424880-82425066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 10, 33 | 
| Conread position: | 470-676 | 
| Cow position: | chr3:81255611-81255818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 11, 126 | 
| Conread position: | 470-680 | 
| Cow position: | chr3:3163913-3164116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 123, 61 | 
| Conread position: | 470-685 | 
| Cow position: | chr3:65022509-65022283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 470-687 | 
| Cow position: | chr3:44782542-44782330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 7, 35 | 
| Conread position: | 470-696 | 
| Cow position: | chr3:6724404-6724177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 141, 0 | 
| Conread position: | 470-696 | 
| Cow position: | chr3:73589565-73589793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 76, 32 | 
| Conread position: | 470-714 | 
| Cow position: | chr3:30026578-30026327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 470-728 | 
| Cow position: | chr3:175145-174893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 144, 65 | 
| Conread position: | 470-729 | 
| Cow position: | chr3:55116772-55117035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 15, 88 | 
| Conread position: | 470-729 | 
| Cow position: | chr3:56948895-56949143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 142, 19 | 
| Conread position: | 470-764 | 
| Cow position: | chr3:72474124-72473825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 120 | 
| Conread position: | 470-767 | 
| Cow position: | chr3:53271032-53270739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 23 | 
| Conread position: | 470-769 | 
| Cow position: | chr3:20043397-20043683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 142, 14 | 
| Conread position: | 470-769 | 
| Cow position: | chr3:68587220-68586928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 14 | 
| Conread position: | 470-771 | 
| Cow position: | chr3:30462976-30463264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 471-646 | 
| Cow position: | chr3:12621176-12621350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 140, 12 | 
| Conread position: | 471-654 | 
| Cow position: | chr3:77665358-77665531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 141, 23 | 
| Conread position: | 471-667 | 
| Cow position: | chr3:82175711-82175514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 11, 160 | 
| Conread position: | 471-716 | 
| Cow position: | chr3:91278-91033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 29, 52 | 
| Conread position: | 471-722 | 
| Cow position: | chr3:3584543-3584299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 15, 107 | 
| Conread position: | 471-758 | 
| Cow position: | chr3:11276399-11276662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 21, 32 | 
| Conread position: | 471-765 | 
| Cow position: | chr3:47753437-47753135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 11, 31 | 
| Conread position: | 471-769 | 
| Cow position: | chr3:55434533-55434238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 19, 226 | 
| Conread position: | 471-769 | 
| Cow position: | chr3:79813820-79813513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 472-593 | 
| Cow position: | chr3:28096664-28096786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 472-620 | 
| Cow position: | chr3:33302-33457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 472-673 | 
| Cow position: | chr3:62434935-62435149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 472-679 | 
| Cow position: | chr3:70333028-70333226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 25, 110 | 
| Conread position: | 472-684 | 
| Cow position: | chr3:21246821-21247024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 139, 120 | 
| Conread position: | 472-689 | 
| Cow position: | chr3:33289877-33290096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 18, 133 | 
| Conread position: | 472-697 | 
| Cow position: | chr3:55248788-55248565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 109, 30 | 
| Conread position: | 472-711 | 
| Cow position: | chr3:7678865-7678622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 88, 163 | 
| Conread position: | 472-716 | 
| Cow position: | chr3:66631146-66631394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 121, 17 | 
| Conread position: | 472-722 | 
| Cow position: | chr3:37647588-37647332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 108, 30 | 
| Conread position: | 472-722 | 
| Cow position: | chr3:84378276-84378527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 138, 0 | 
| Conread position: | 472-725 | 
| Cow position: | chr3:65237224-65236973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 30, 12 | 
| Conread position: | 472-749 | 
| Cow position: | chr3:80072343-80072054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 139, 70 | 
| Conread position: | 472-769 | 
| Cow position: | chr3:45211505-45211202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 283 | 
| Conread position: | 472-772 | 
| Cow position: | chr3:55734155-55733854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 116, 28 | 
| Conread position: | 473-588 | 
| Cow position: | chr3:72910876-72910991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 473-637 | 
| Cow position: | chr3:18301371-18301534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 138, 21 | 
| Conread position: | 473-661 | 
| Cow position: | chr3:56394275-56394087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 23, 56 | 
| Conread position: | 473-661 | 
| Cow position: | chr3:57790813-57790626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 30, 96 | 
| Conread position: | 473-664 | 
| Cow position: | chr3:35079306-35079498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 138, 0 | 
| Conread position: | 473-680 | 
| Cow position: | chr3:58614666-58614450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 473-680 | 
| Cow position: | chr3:79398344-79398136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 473-689 | 
| Cow position: | chr3:56583045-56582833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 473-690 | 
| Cow position: | chr3:53192076-53192306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 103, 223 | 
| Conread position: | 473-696 | 
| Cow position: | chr3:63202118-63201895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 138, 10 | 
| Conread position: | 473-699 | 
| Cow position: | chr3:24516007-24516236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 473-700 | 
| Cow position: | chr3:28323405-28323191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 138, 10 | 
| Conread position: | 473-707 | 
| Cow position: | chr3:44594818-44594592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 138, 11 | 
| Conread position: | 473-710 | 
| Cow position: | chr3:80733649-80733889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 473-711 | 
| Cow position: | chr3:61857707-61857471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 115, 37 | 
| Conread position: | 473-714 | 
| Cow position: | chr3:16547867-16547626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 76, 10 | 
| Conread position: | 473-714 | 
| Cow position: | chr3:32570057-32569813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 125, 143 | 
| Conread position: | 473-724 | 
| Cow position: | chr3:83889448-83889197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 198 | 
| Conread position: | 473-728 | 
| Cow position: | chr3:79272377-79272631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 138, 100 | 
| Conread position: | 473-764 | 
| Cow position: | chr3:55177557-55177838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 141, 11 | 
| Conread position: | 473-769 | 
| Cow position: | chr3:35153803-35153523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 140, 28 | 
| Conread position: | 474-607 | 
| Cow position: | chr3:26373833-26373967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 19, 121 | 
| Conread position: | 474-612 | 
| Cow position: | chr3:9000121-8999981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 474-623 | 
| Cow position: | chr3:14000360-14000500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 137, 32 | 
| Conread position: | 474-627 | 
| Cow position: | chr3:79316890-79316735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 98, 41 | 
| Conread position: | 474-643 | 
| Cow position: | chr3:2258080-2257909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 16, 122 | 
| Conread position: | 474-644 | 
| Cow position: | chr3:73410481-73410316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 7, 21 | 
| Conread position: | 474-666 | 
| Cow position: | chr3:11608015-11607830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 137, 105 | 
| Conread position: | 474-677 | 
| Cow position: | chr3:8147323-8147528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 13, 87 | 
| Conread position: | 474-680 | 
| Cow position: | chr3:49741097-49741307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 84, 187 | 
| Conread position: | 474-696 | 
| Cow position: | chr3:45314551-45314322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 474-697 | 
| Cow position: | chr3:54988657-54988423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 474-703 | 
| Cow position: | chr3:79893297-79893526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 113 | 
| Conread position: | 474-706 | 
| Cow position: | chr3:38828951-38828727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 23, 75 | 
| Conread position: | 474-707 | 
| Cow position: | chr3:20158269-20158032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 90, 15 | 
| Conread position: | 474-709 | 
| Cow position: | chr3:18249154-18248917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 474-709 | 
| Cow position: | chr3:42355865-42355629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 6, 57 | 
| Conread position: | 474-711 | 
| Cow position: | chr3:26505397-26505624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 474-712 | 
| Cow position: | chr3:59933578-59933333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 95, 145 | 
| Conread position: | 474-714 | 
| Cow position: | chr3:74620789-74621029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 14, 109 | 
| Conread position: | 474-714 | 
| Cow position: | chr3:78066955-78067197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 105, 10 | 
| Conread position: | 474-715 | 
| Cow position: | chr3:55541216-55540973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 117, 10 | 
| Conread position: | 474-723 | 
| Cow position: | chr3:75107970-75107725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 24, 15 | 
| Conread position: | 474-723 | 
| Cow position: | chr3:81136251-81136004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 16, 34 | 
| Conread position: | 474-724 | 
| Cow position: | chr3:24596232-24596469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 14, 53 | 
| Conread position: | 474-724 | 
| Cow position: | chr3:48468374-48468119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 0 | 
| Conread position: | 474-728 | 
| Cow position: | chr3:54049831-54050085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 136, 113 | 
| Conread position: | 474-747 | 
| Cow position: | chr3:39247832-39248093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 19, 57 | 
| Conread position: | 474-748 | 
| Cow position: | chr3:39605818-39606095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 108, 10 | 
| Conread position: | 474-762 | 
| Cow position: | chr3:10591312-10591604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 23, 88 | 
| Conread position: | 474-764 | 
| Cow position: | chr3:17235006-17235297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 87, 162 | 
| Conread position: | 474-767 | 
| Cow position: | chr3:1830376-1830665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 35 | 
| Conread position: | 474-767 | 
| Cow position: | chr3:2025400-2025095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 21 | 
| Conread position: | 474-767 | 
| Cow position: | chr3:13301653-13301938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 10 | 
| Conread position: | 474-769 | 
| Cow position: | chr3:11199777-11200073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 16, 255 | 
| Conread position: | 474-769 | 
| Cow position: | chr3:22668612-22668322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 16, 133 | 
| Conread position: | 474-769 | 
| Cow position: | chr3:44234906-44234627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 16, 84 | 
| Conread position: | 474-769 | 
| Cow position: | chr3:59035242-59034945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 474-772 | 
| Cow position: | chr3:12705347-12705641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 7, 97 | 
| Conread position: | 475-669 | 
| Cow position: | chr3:83454960-83455146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 12, 28 | 
| Conread position: | 475-670 | 
| Cow position: | chr3:75871678-75871482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 136, 0 | 
| Conread position: | 475-676 | 
| Cow position: | chr3:48772032-48772239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 475-679 | 
| Cow position: | chr3:75183515-75183303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 91, 34 | 
| Conread position: | 475-680 | 
| Cow position: | chr3:16362321-16362511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 136, 20 | 
| Conread position: | 475-696 | 
| Cow position: | chr3:49363306-49363087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 30, 89 | 
| Conread position: | 475-709 | 
| Cow position: | chr3:25065419-25065186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 15, 52 | 
| Conread position: | 475-716 | 
| Cow position: | chr3:59828193-59828435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 9 | 
| Conread position: | 475-732 | 
| Cow position: | chr3:78092317-78092569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 137, 17 | 
| Conread position: | 475-764 | 
| Cow position: | chr3:19711142-19711422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 131, 26 | 
| Conread position: | 475-764 | 
| Cow position: | chr3:23471270-23471554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 9 | 
| Conread position: | 475-764 | 
| Cow position: | chr3:52651885-52652169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 136, 26 | 
| Conread position: | 475-764 | 
| Cow position: | chr3:81087439-81087720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 136, 191 | 
| Conread position: | 475-764 | 
| Cow position: | chr3:83491273-83490999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 9 | 
| Conread position: | 475-769 | 
| Cow position: | chr3:3656713-3656421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 54 | 
| Conread position: | 475-769 | 
| Cow position: | chr3:32310214-32310512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 476-572 | 
| Cow position: | chr3:16795270-16795174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 97 | 
| Alignm identity: | 82 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 476-577 | 
| Cow position: | chr3:4321453-4321556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 476-586 | 
| Cow position: | chr3:15861115-15861226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 476-587 | 
| Cow position: | chr3:49823517-49823405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 476-588 | 
| Cow position: | chr3:47735418-47735305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 476-588 | 
| Cow position: | chr3:51012250-51012362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 476-615 | 
| Cow position: | chr3:15780626-15780770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 92, 19 | 
| Conread position: | 476-621 | 
| Cow position: | chr3:15780908-15781051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 476-627 | 
| Cow position: | chr3:70632338-70632191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 136, 29 | 
| Conread position: | 476-637 | 
| Cow position: | chr3:5823358-5823506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 135, 55 | 
| Conread position: | 476-638 | 
| Cow position: | chr3:7408637-7408471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 476-640 | 
| Cow position: | chr3:53591297-53591463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 476-659 | 
| Cow position: | chr3:84250629-84250817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 109, 26 | 
| Conread position: | 476-661 | 
| Cow position: | chr3:17331914-17331735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 136, 26 | 
| Conread position: | 476-661 | 
| Cow position: | chr3:66120897-66120721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 90, 48 | 
| Conread position: | 476-661 | 
| Cow position: | chr3:66884836-66885017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 116, 25 | 
| Conread position: | 476-661 | 
| Cow position: | chr3:68624414-68624230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 134, 19 | 
| Conread position: | 476-668 | 
| Cow position: | chr3:59588840-59588644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 106, 0 | 
| Conread position: | 476-673 | 
| Cow position: | chr3:8975043-8974845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 476-675 | 
| Cow position: | chr3:29413273-29413059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 90, 11 | 
| Conread position: | 476-678 | 
| Cow position: | chr3:31352688-31352879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 136, 48 | 
| Conread position: | 476-685 | 
| Cow position: | chr3:58558476-58558268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 134, 18 | 
| Conread position: | 476-689 | 
| Cow position: | chr3:59317897-59317687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 92 | 
| Conread position: | 476-692 | 
| Cow position: | chr3:46271589-46271807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 14, 125 | 
| Conread position: | 476-695 | 
| Cow position: | chr3:70402835-70402623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 21, 92 | 
| Conread position: | 476-696 | 
| Cow position: | chr3:73305311-73305088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 476-701 | 
| Cow position: | chr3:4120175-4120393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 135, 93 | 
| Conread position: | 476-707 | 
| Cow position: | chr3:32317631-32317864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 12, 113 | 
| Conread position: | 476-708 | 
| Cow position: | chr3:22924185-22924409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 137, 26 | 
| Conread position: | 476-712 | 
| Cow position: | chr3:41863817-41863586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 19 | 
| Conread position: | 476-712 | 
| Cow position: | chr3:67966293-67966533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 14, 172 | 
| Conread position: | 476-714 | 
| Cow position: | chr3:31297960-31298203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 476-714 | 
| Cow position: | chr3:42671730-42671489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 18, 179 | 
| Conread position: | 476-714 | 
| Cow position: | chr3:73525039-73525278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 476-714 | 
| Cow position: | chr3:79902694-79902456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 14, 119 | 
| Conread position: | 476-722 | 
| Cow position: | chr3:50768873-50768631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 136, 8 | 
| Conread position: | 476-724 | 
| Cow position: | chr3:27082845-27083099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 138, 102 | 
| Conread position: | 476-725 | 
| Cow position: | chr3:18426504-18426758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 136, 97 | 
| Conread position: | 476-725 | 
| Cow position: | chr3:40212840-40213084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 13 | 
| Conread position: | 476-728 | 
| Cow position: | chr3:26488880-26489134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 14, 67 | 
| Conread position: | 476-728 | 
| Cow position: | chr3:83727048-83727305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 14, 123 | 
| Conread position: | 476-739 | 
| Cow position: | chr3:81713262-81713526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 120, 26 | 
| Conread position: | 476-744 | 
| Cow position: | chr3:76156181-76155919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 134, 26 | 
| Conread position: | 476-761 | 
| Cow position: | chr3:14801941-14801657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 16, 53 | 
| Conread position: | 476-762 | 
| Cow position: | chr3:64197021-64196738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 136, 97 | 
| Conread position: | 476-764 | 
| Cow position: | chr3:9662975-9663259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 25 | 
| Conread position: | 476-764 | 
| Cow position: | chr3:15671956-15672248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 14, 155 | 
| Conread position: | 476-764 | 
| Cow position: | chr3:27274719-27274442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 134, 17 | 
| Conread position: | 476-764 | 
| Cow position: | chr3:27696768-27697064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 86, 162 | 
| Conread position: | 476-764 | 
| Cow position: | chr3:39873512-39873785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 238, 81 | 
| Conread position: | 476-764 | 
| Cow position: | chr3:46005819-46006102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 86, 168 | 
| Conread position: | 476-764 | 
| Cow position: | chr3:53209813-53210108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 79, 26 | 
| Conread position: | 476-764 | 
| Cow position: | chr3:53318604-53318317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 18 | 
| Conread position: | 476-765 | 
| Cow position: | chr3:51033570-51033279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 16, 59 | 
| Conread position: | 476-769 | 
| Cow position: | chr3:4319912-4319619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 23 | 
| Conread position: | 476-769 | 
| Cow position: | chr3:18143917-18144214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 14, 46 | 
| Conread position: | 476-769 | 
| Cow position: | chr3:30008708-30009006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 14, 81 | 
| Conread position: | 476-769 | 
| Cow position: | chr3:55712626-55712339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 8 | 
| Conread position: | 476-769 | 
| Cow position: | chr3:60933611-60933322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 137, 10 | 
| Conread position: | 476-769 | 
| Cow position: | chr3:64527041-64526755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 476-769 | 
| Cow position: | chr3:67698475-67698186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 133, 219 | 
| Conread position: | 476-771 | 
| Cow position: | chr3:80565159-80564869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 19, 66 | 
| Conread position: | 476-772 | 
| Cow position: | chr3:5707015-5707310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 135, 11 | 
| Conread position: | 477-619 | 
| Cow position: | chr3:41746304-41746451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 19, 45 | 
| Conread position: | 477-620 | 
| Cow position: | chr3:52635915-52635773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 16, 7 | 
| Conread position: | 477-626 | 
| Cow position: | chr3:42933678-42933528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 477-655 | 
| Cow position: | chr3:34931606-34931782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 105, 11 | 
| Conread position: | 477-668 | 
| Cow position: | chr3:64909900-64910090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 132, 105 | 
| Conread position: | 477-671 | 
| Cow position: | chr3:32248209-32248014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 477-677 | 
| Cow position: | chr3:19641261-19641057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 17, 190 | 
| Conread position: | 477-680 | 
| Cow position: | chr3:37851691-37851490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 37 | 
| Conread position: | 477-685 | 
| Cow position: | chr3:78258556-78258766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 85, 25 | 
| Conread position: | 477-686 | 
| Cow position: | chr3:24925012-24924806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 200, 125 | 
| Conread position: | 477-695 | 
| Cow position: | chr3:58101868-58101658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 132, 17 | 
| Conread position: | 477-697 | 
| Cow position: | chr3:12669335-12669113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 20, 162 | 
| Conread position: | 477-697 | 
| Cow position: | chr3:72087432-72087213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 10, 56 | 
| Conread position: | 477-702 | 
| Cow position: | chr3:11198164-11198389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 99, 18 | 
| Conread position: | 477-703 | 
| Cow position: | chr3:23818677-23818463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 135, 7 | 
| Conread position: | 477-704 | 
| Cow position: | chr3:14211791-14212010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 134, 90 | 
| Conread position: | 477-704 | 
| Cow position: | chr3:74127305-74127533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 102, 184 | 
| Conread position: | 477-708 | 
| Cow position: | chr3:44960140-44959908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 477-713 | 
| Cow position: | chr3:84137619-84137854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 87 | 
| Conread position: | 477-714 | 
| Cow position: | chr3:74087982-74088219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 130, 175 | 
| Conread position: | 477-714 | 
| Cow position: | chr3:75222700-75222463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 136, 117 | 
| Conread position: | 477-725 | 
| Cow position: | chr3:78443370-78443618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 26, 202 | 
| Conread position: | 477-725 | 
| Cow position: | chr3:79271514-79271763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 82 | 
| Conread position: | 477-756 | 
| Cow position: | chr3:61224554-61224827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 134, 97 | 
| Conread position: | 477-763 | 
| Cow position: | chr3:51608988-51609273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 114 | 
| Conread position: | 477-764 | 
| Cow position: | chr3:31225616-31225351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 137, 25 | 
| Conread position: | 477-764 | 
| Cow position: | chr3:39661259-39661543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 190 | 
| Conread position: | 477-764 | 
| Cow position: | chr3:59333952-59333683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 36, 24 | 
| Conread position: | 477-764 | 
| Cow position: | chr3:68648369-68648078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 107, 17 | 
| Conread position: | 477-767 | 
| Cow position: | chr3:58134487-58134779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 117 | 
| Conread position: | 477-769 | 
| Cow position: | chr3:48241801-48241524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 34 | 
| Conread position: | 477-769 | 
| Cow position: | chr3:53592491-53592786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 136, 265 | 
| Conread position: | 477-772 | 
| Cow position: | chr3:71238346-71238061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 34 | 
| Conread position: | 478-606 | 
| Cow position: | chr3:57056101-57055972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 478-645 | 
| Cow position: | chr3:75908104-75907940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 14, 24 | 
| Conread position: | 478-653 | 
| Cow position: | chr3:22903564-22903732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 134, 89 | 
| Conread position: | 478-654 | 
| Cow position: | chr3:43016249-43016431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 56, 6 | 
| Conread position: | 478-655 | 
| Cow position: | chr3:42484120-42483945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 134, 24 | 
| Conread position: | 478-655 | 
| Cow position: | chr3:48537560-48537381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 478-661 | 
| Cow position: | chr3:57641998-57641813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 21, 119 | 
| Conread position: | 478-668 | 
| Cow position: | chr3:19611159-19611346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 132, 89 | 
| Conread position: | 478-671 | 
| Cow position: | chr3:12637697-12637512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 136, 17 | 
| Conread position: | 478-676 | 
| Cow position: | chr3:2016625-2016433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 133, 31 | 
| Conread position: | 478-680 | 
| Cow position: | chr3:19709300-19709104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 20, 89 | 
| Conread position: | 478-680 | 
| Cow position: | chr3:83934921-83934719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 16, 105 | 
| Conread position: | 478-687 | 
| Cow position: | chr3:76168436-76168645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 24 | 
| Conread position: | 478-695 | 
| Cow position: | chr3:18699914-18700132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 0 | 
| Conread position: | 478-700 | 
| Cow position: | chr3:76056093-76056311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 84 | 
| Conread position: | 478-705 | 
| Cow position: | chr3:29334217-29334447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 29 | 
| Conread position: | 478-706 | 
| Cow position: | chr3:42589294-42589077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 19, 6 | 
| Conread position: | 478-710 | 
| Cow position: | chr3:81616258-81616490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 134, 23 | 
| Conread position: | 478-711 | 
| Cow position: | chr3:58452239-58452011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 140 | 
| Conread position: | 478-711 | 
| Cow position: | chr3:84928300-84928066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 112, 9 | 
| Conread position: | 478-714 | 
| Cow position: | chr3:27553727-27553489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 12, 32 | 
| Conread position: | 478-719 | 
| Cow position: | chr3:8813908-8814157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 38 | 
| Conread position: | 478-722 | 
| Cow position: | chr3:20841687-20841921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 9 | 
| Conread position: | 478-722 | 
| Cow position: | chr3:22165220-22165463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 19, 104 | 
| Conread position: | 478-723 | 
| Cow position: | chr3:44720692-44720453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 133, 115 | 
| Conread position: | 478-725 | 
| Cow position: | chr3:26337822-26338078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 478-728 | 
| Cow position: | chr3:80597923-80597670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 478-744 | 
| Cow position: | chr3:81234582-81234318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 87 | 
| Conread position: | 478-754 | 
| Cow position: | chr3:27976336-27976604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 16 | 
| Conread position: | 478-762 | 
| Cow position: | chr3:53875570-53875847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 23 | 
| Conread position: | 478-762 | 
| Cow position: | chr3:54481607-54481889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 17, 65 | 
| Conread position: | 478-764 | 
| Cow position: | chr3:55970708-55970419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 24 | 
| Conread position: | 478-764 | 
| Cow position: | chr3:57577895-57577610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 69 | 
| Conread position: | 478-764 | 
| Cow position: | chr3:59649445-59649168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 133, 23 | 
| Conread position: | 478-764 | 
| Cow position: | chr3:62046864-62046573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 24 | 
| Conread position: | 478-764 | 
| Cow position: | chr3:68145663-68145929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 133, 6 | 
| Conread position: | 478-764 | 
| Cow position: | chr3:74939775-74939470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 100, 135 | 
| Conread position: | 478-765 | 
| Cow position: | chr3:1889911-1890201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 478-769 | 
| Cow position: | chr3:3913246-3913537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 478-769 | 
| Cow position: | chr3:15153881-15153596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 16 | 
| Conread position: | 478-769 | 
| Cow position: | chr3:15953887-15954179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 266 | 
| Conread position: | 478-769 | 
| Cow position: | chr3:17957656-17957373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 14, 138 | 
| Conread position: | 478-769 | 
| Cow position: | chr3:19793093-19792801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 18, 52 | 
| Conread position: | 478-769 | 
| Cow position: | chr3:61539993-61539711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 18, 59 | 
| Conread position: | 478-769 | 
| Cow position: | chr3:65058892-65058609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 11 | 
| Conread position: | 479-574 | 
| Cow position: | chr3:57760714-57760619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 96 | 
| Alignm identity: | 80 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 479-600 | 
| Cow position: | chr3:52359330-52359211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 16, 84 | 
| Conread position: | 479-633 | 
| Cow position: | chr3:42262870-42262712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 479-658 | 
| Cow position: | chr3:13928010-13927832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 132, 23 | 
| Conread position: | 479-677 | 
| Cow position: | chr3:63780303-63780502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 37, 20 | 
| Conread position: | 479-680 | 
| Cow position: | chr3:21694418-21694218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 108, 9 | 
| Conread position: | 479-689 | 
| Cow position: | chr3:6049095-6049304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 61, 22 | 
| Conread position: | 479-692 | 
| Cow position: | chr3:31168745-31168531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 11, 129 | 
| Conread position: | 479-692 | 
| Cow position: | chr3:36411891-36412106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 38, 5 | 
| Conread position: | 479-697 | 
| Cow position: | chr3:32377005-32376791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 133, 67 | 
| Conread position: | 479-698 | 
| Cow position: | chr3:16710604-16710823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 68, 23 | 
| Conread position: | 479-701 | 
| Cow position: | chr3:7381639-7381856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 132, 72 | 
| Conread position: | 479-704 | 
| Cow position: | chr3:4071578-4071793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 132, 22 | 
| Conread position: | 479-711 | 
| Cow position: | chr3:46792576-46792348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 80 | 
| Conread position: | 479-712 | 
| Cow position: | chr3:69785428-69785663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 113, 23 | 
| Conread position: | 479-728 | 
| Cow position: | chr3:69650704-69650943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 22, 49 | 
| Conread position: | 479-740 | 
| Cow position: | chr3:19199180-19198918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 132, 59 | 
| Conread position: | 479-757 | 
| Cow position: | chr3:36160007-36160276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 133, 63 | 
| Conread position: | 479-762 | 
| Cow position: | chr3:20802445-20802709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 23, 104 | 
| Conread position: | 479-764 | 
| Cow position: | chr3:3032605-3032318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 96 | 
| Conread position: | 479-764 | 
| Cow position: | chr3:26066177-26065916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 53, 15 | 
| Conread position: | 479-764 | 
| Cow position: | chr3:45667149-45667432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 5 | 
| Conread position: | 479-764 | 
| Cow position: | chr3:55094039-55094321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 8 | 
| Conread position: | 479-764 | 
| Cow position: | chr3:75687246-75687525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 135, 23 | 
| Conread position: | 479-769 | 
| Cow position: | chr3:26982242-26981974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 133, 45 | 
| Conread position: | 479-769 | 
| Cow position: | chr3:59719043-59718751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 138, 52 | 
| Conread position: | 479-769 | 
| Cow position: | chr3:71496935-71497236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 479-769 | 
| Cow position: | chr3:78945626-78945927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 17, 224 | 
| Conread position: | 479-772 | 
| Cow position: | chr3:77081841-77082122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 245, 84 | 
| Conread position: | 480-644 | 
| Cow position: | chr3:58497852-58497687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 131, 0 | 
| Conread position: | 480-651 | 
| Cow position: | chr3:84243489-84243657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 480-669 | 
| Cow position: | chr3:26977729-26977539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 132, 48 | 
| Conread position: | 480-678 | 
| Cow position: | chr3:80910789-80910591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 132, 110 | 
| Conread position: | 480-694 | 
| Cow position: | chr3:45744103-45743885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 10, 91 | 
| Conread position: | 480-695 | 
| Cow position: | chr3:63860418-63860632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 131, 88 | 
| Conread position: | 480-706 | 
| Cow position: | chr3:19900848-19900622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 130, 148 | 
| Conread position: | 480-710 | 
| Cow position: | chr3:54297287-54297518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 18, 145 | 
| Conread position: | 480-716 | 
| Cow position: | chr3:423561-423320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 131, 19 | 
| Conread position: | 480-761 | 
| Cow position: | chr3:29891215-29891496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 134, 7 | 
| Conread position: | 480-763 | 
| Cow position: | chr3:45700993-45700720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 480-764 | 
| Cow position: | chr3:17456076-17456355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 22 | 
| Conread position: | 481-714 | 
| Cow position: | chr3:29828221-29828457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 481-716 | 
| Cow position: | chr3:52457100-52456876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 78, 49 | 
| Conread position: | 481-738 | 
| Cow position: | chr3:30438542-30438800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 14, 41 | 
| Conread position: | 481-753 | 
| Cow position: | chr3:63657658-63657940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 48, 138 | 
| Conread position: | 481-762 | 
| Cow position: | chr3:53703756-53704052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 136 | 
| Conread position: | 481-764 | 
| Cow position: | chr3:4268384-4268670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 130, 21 | 
| Conread position: | 481-764 | 
| Cow position: | chr3:23168873-23169154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 13, 51 | 
| Conread position: | 481-764 | 
| Cow position: | chr3:49118841-49119113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 108, 21 | 
| Conread position: | 482-602 | 
| Cow position: | chr3:623940-623819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 482-639 | 
| Cow position: | chr3:27212508-27212356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 129, 85 | 
| Conread position: | 482-685 | 
| Cow position: | chr3:35802746-35802952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 482-695 | 
| Cow position: | chr3:43388932-43389149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 482-711 | 
| Cow position: | chr3:59947858-59947627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 482-764 | 
| Cow position: | chr3:75480188-75479913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 86, 98 | 
| Conread position: | 483-676 | 
| Cow position: | chr3:46259901-46259708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 129, 115 | 
| Conread position: | 483-725 | 
| Cow position: | chr3:59299765-59299523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 24, 91 | 
| Conread position: | 483-745 | 
| Cow position: | chr3:9025891-9026157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 132 | 
| Conread position: | 483-761 | 
| Cow position: | chr3:70896226-70895962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 54, 12 | 
| Conread position: | 483-764 | 
| Cow position: | chr3:8061309-8061040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 130, 49 | 
| Conread position: | 483-764 | 
| Cow position: | chr3:39969673-39969953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 14, 91 | 
| Conread position: | 483-764 | 
| Cow position: | chr3:75853144-75853417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 12, 51 | 
| Conread position: | 483-767 | 
| Cow position: | chr3:13890674-13890385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 7, 261 | 
| Conread position: | 484-579 | 
| Cow position: | chr3:24584961-24585055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 96 | 
| Alignm identity: | 81 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 484-588 | 
| Cow position: | chr3:40794530-40794635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 484-600 | 
| Cow position: | chr3:52499009-52499124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 484-615 | 
| Cow position: | chr3:4274993-4274861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 92, 108 | 
| Conread position: | 484-620 | 
| Cow position: | chr3:59997942-59997804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 484-628 | 
| Cow position: | chr3:79877218-79877072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 484-632 | 
| Cow position: | chr3:57553710-57553851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 127, 72 | 
| Conread position: | 484-645 | 
| Cow position: | chr3:61171170-61171340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 484-652 | 
| Cow position: | chr3:51543626-51543456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 98, 18 | 
| Conread position: | 484-656 | 
| Cow position: | chr3:58929344-58929517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 484-660 | 
| Cow position: | chr3:49787744-49787572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 127, 89 | 
| Conread position: | 484-660 | 
| Cow position: | chr3:55105958-55106135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 484-666 | 
| Cow position: | chr3:20854540-20854726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 18, 67 | 
| Conread position: | 484-675 | 
| Cow position: | chr3:21959853-21959658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 90, 65 | 
| Conread position: | 484-675 | 
| Cow position: | chr3:59926821-59926619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 484-677 | 
| Cow position: | chr3:24220393-24220581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 484-678 | 
| Cow position: | chr3:11027466-11027270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 484-679 | 
| Cow position: | chr3:17531550-17531743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 128, 25 | 
| Conread position: | 484-680 | 
| Cow position: | chr3:15859194-15859385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 119, 77 | 
| Conread position: | 484-680 | 
| Cow position: | chr3:80958322-80958517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 127, 18 | 
| Conread position: | 484-683 | 
| Cow position: | chr3:72687678-72687879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 484-684 | 
| Cow position: | chr3:60371173-60370972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 13, 57 | 
| Conread position: | 484-685 | 
| Cow position: | chr3:38331422-38331623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 127, 109 | 
| Conread position: | 484-685 | 
| Cow position: | chr3:38817476-38817679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 6, 111 | 
| Conread position: | 484-688 | 
| Cow position: | chr3:58010646-58010842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 127, 40 | 
| Conread position: | 484-690 | 
| Cow position: | chr3:6265977-6265769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 98, 18 | 
| Conread position: | 484-691 | 
| Cow position: | chr3:68289870-68289663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 114, 18 | 
| Conread position: | 484-695 | 
| Cow position: | chr3:59268562-59268350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 484-695 | 
| Cow position: | chr3:61023834-61024044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 18 | 
| Conread position: | 484-696 | 
| Cow position: | chr3:51150318-51150106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 36 | 
| Conread position: | 484-696 | 
| Cow position: | chr3:79339388-79339601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 64, 87 | 
| Conread position: | 484-697 | 
| Cow position: | chr3:79105393-79105604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 79, 18 | 
| Conread position: | 484-698 | 
| Cow position: | chr3:84807138-84807352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 127, 49 | 
| Conread position: | 484-701 | 
| Cow position: | chr3:67407181-67407393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 126, 17 | 
| Conread position: | 484-704 | 
| Cow position: | chr3:79221042-79220828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 6, 52 | 
| Conread position: | 484-706 | 
| Cow position: | chr3:78071604-78071823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 127, 89 | 
| Conread position: | 484-710 | 
| Cow position: | chr3:44207691-44207920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 127, 17 | 
| Conread position: | 484-711 | 
| Cow position: | chr3:6728133-6728367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 484-711 | 
| Cow position: | chr3:53910295-53910072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 14, 45 | 
| Conread position: | 484-714 | 
| Cow position: | chr3:14770697-14770922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 6, 84 | 
| Conread position: | 484-714 | 
| Cow position: | chr3:49482525-49482756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 48 | 
| Conread position: | 484-716 | 
| Cow position: | chr3:15973758-15973524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 484-716 | 
| Cow position: | chr3:72027827-72027592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 162 | 
| Conread position: | 484-721 | 
| Cow position: | chr3:68880945-68881163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 484-722 | 
| Cow position: | chr3:41874095-41873853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 129, 110 | 
| Conread position: | 484-724 | 
| Cow position: | chr3:5040114-5040357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 99 | 
| Conread position: | 484-724 | 
| Cow position: | chr3:76270074-76269846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 130, 17 | 
| Conread position: | 484-725 | 
| Cow position: | chr3:68156915-68156671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 90, 47 | 
| Conread position: | 484-728 | 
| Cow position: | chr3:12090865-12090619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 154 | 
| Conread position: | 484-728 | 
| Cow position: | chr3:48810450-48810699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 484-729 | 
| Cow position: | chr3:82019656-82019894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 130, 17 | 
| Conread position: | 484-743 | 
| Cow position: | chr3:18393212-18393463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 29, 85 | 
| Conread position: | 484-744 | 
| Cow position: | chr3:54067982-54067729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 127, 44 | 
| Conread position: | 484-752 | 
| Cow position: | chr3:54551522-54551790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 129, 161 | 
| Conread position: | 484-757 | 
| Cow position: | chr3:17694814-17695085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 127, 190 | 
| Conread position: | 484-759 | 
| Cow position: | chr3:14725503-14725220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 167, 18 | 
| Conread position: | 484-761 | 
| Cow position: | chr3:3889390-3889655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 11 | 
| Conread position: | 484-761 | 
| Cow position: | chr3:30266508-30266787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 127, 17 | 
| Conread position: | 484-761 | 
| Cow position: | chr3:46341674-46341378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 12, 183 | 
| Conread position: | 484-762 | 
| Cow position: | chr3:18687089-18686822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 84 | 
| Conread position: | 484-763 | 
| Cow position: | chr3:18067319-18067049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 46 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:210510-210229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 252 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:24468196-24468466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 47 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:29813414-29813157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 8, 19 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:57704518-57704235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 128, 17 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:71247201-71246937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:71478777-71478505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 128, 10 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:75050437-75050707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 17 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:75777881-75778149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 126, 77 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:81039560-81039832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 50, 17 | 
| Conread position: | 484-764 | 
| Cow position: | chr3:83787630-83787349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 127, 109 | 
| Conread position: | 484-766 | 
| Cow position: | chr3:34871756-34871475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 148 | 
| Conread position: | 484-767 | 
| Cow position: | chr3:18059892-18059611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 97 | 
| Conread position: | 484-769 | 
| Cow position: | chr3:14465527-14465805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 128, 44 | 
| Conread position: | 484-769 | 
| Cow position: | chr3:14601525-14601804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 128, 10 | 
| Conread position: | 484-769 | 
| Cow position: | chr3:18180150-18179853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 78, 18 | 
| Conread position: | 484-769 | 
| Cow position: | chr3:28908030-28908296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 130, 15 | 
| Conread position: | 484-769 | 
| Cow position: | chr3:30180271-30179989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 84 | 
| Conread position: | 484-769 | 
| Cow position: | chr3:36569851-36570139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 101, 18 | 
| Conread position: | 484-769 | 
| Cow position: | chr3:44837178-44837476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 106, 0 | 
| Conread position: | 485-687 | 
| Cow position: | chr3:23640527-23640330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 9, 90 | 
| Conread position: | 485-689 | 
| Cow position: | chr3:3262633-3262842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 17, 190 | 
| Conread position: | 485-763 | 
| Cow position: | chr3:23203044-23203322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 16 | 
| Conread position: | 485-763 | 
| Cow position: | chr3:56678158-56678440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 262 | 
| Conread position: | 485-764 | 
| Cow position: | chr3:48900143-48900428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 185 | 
| Conread position: | 485-767 | 
| Cow position: | chr3:13899266-13899536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 11, 157 | 
| Conread position: | 486-644 | 
| Cow position: | chr3:78115404-78115563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 486-645 | 
| Cow position: | chr3:35005395-35005563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 486-661 | 
| Cow position: | chr3:25101709-25101529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 486-693 | 
| Cow position: | chr3:50350791-50350988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 12, 87 | 
| Conread position: | 486-695 | 
| Cow position: | chr3:32436826-32436619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 12, 115 | 
| Conread position: | 486-698 | 
| Cow position: | chr3:27246782-27246983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 125, 16 | 
| Conread position: | 486-722 | 
| Cow position: | chr3:2036491-2036251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 18, 130 | 
| Conread position: | 486-764 | 
| Cow position: | chr3:48459141-48459420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 13, 102 | 
| Conread position: | 486-764 | 
| Cow position: | chr3:79884294-79884569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 208 | 
| Conread position: | 486-769 | 
| Cow position: | chr3:21081194-21081468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 76, 42 | 
| Conread position: | 487-615 | 
| Cow position: | chr3:56023208-56023080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 126, 107 | 
| Conread position: | 487-632 | 
| Cow position: | chr3:55972898-55973036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 124, 68 | 
| Conread position: | 487-642 | 
| Cow position: | chr3:4469609-4469765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 126, 0 | 
| Conread position: | 487-644 | 
| Cow position: | chr3:66354866-66354708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 98, 33 | 
| Conread position: | 487-655 | 
| Cow position: | chr3:31489891-31489738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 125, 42 | 
| Conread position: | 487-661 | 
| Cow position: | chr3:40957943-40958114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 125, 96 | 
| Conread position: | 487-661 | 
| Cow position: | chr3:59699466-59699638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 124, 107 | 
| Conread position: | 487-661 | 
| Cow position: | chr3:62998810-62998979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 487-671 | 
| Cow position: | chr3:63069176-63069363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 487-678 | 
| Cow position: | chr3:4102115-4102309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 8, 148 | 
| Conread position: | 487-680 | 
| Cow position: | chr3:15795407-15795213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 21, 108 | 
| Conread position: | 487-682 | 
| Cow position: | chr3:12899762-12899948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 487-687 | 
| Cow position: | chr3:13949354-13949572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 98, 193 | 
| Conread position: | 487-689 | 
| Cow position: | chr3:20065961-20066169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 487-692 | 
| Cow position: | chr3:83705350-83705555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 119, 173 | 
| Conread position: | 487-694 | 
| Cow position: | chr3:41366515-41366730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 487-697 | 
| Cow position: | chr3:47198941-47199150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 39 | 
| Conread position: | 487-714 | 
| Cow position: | chr3:24548645-24548877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 487-714 | 
| Cow position: | chr3:58960408-58960624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 126, 90 | 
| Conread position: | 487-723 | 
| Cow position: | chr3:53384094-53384329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 9, 75 | 
| Conread position: | 487-728 | 
| Cow position: | chr3:68004520-68004756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 26, 43 | 
| Conread position: | 487-729 | 
| Cow position: | chr3:9121028-9120790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 11, 43 | 
| Conread position: | 487-757 | 
| Cow position: | chr3:29596580-29596307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 92, 44 | 
| Conread position: | 487-761 | 
| Cow position: | chr3:19682889-19682607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 76, 15 | 
| Conread position: | 487-764 | 
| Cow position: | chr3:3316625-3316900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 84, 14 | 
| Conread position: | 487-769 | 
| Cow position: | chr3:57754291-57754569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 126, 15 | 
| Conread position: | 487-769 | 
| Cow position: | chr3:71231582-71231306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 15 | 
| Conread position: | 488-601 | 
| Cow position: | chr3:29386053-29385940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 488-659 | 
| Cow position: | chr3:3011329-3011161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 107, 36 | 
| Conread position: | 488-689 | 
| Cow position: | chr3:21050486-21050687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 488-695 | 
| Cow position: | chr3:24304441-24304646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 69, 140 | 
| Conread position: | 488-696 | 
| Cow position: | chr3:28937401-28937627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 48, 13 | 
| Conread position: | 488-706 | 
| Cow position: | chr3:35299870-35299636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 69, 14 | 
| Conread position: | 488-723 | 
| Cow position: | chr3:3584898-3584664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 123, 34 | 
| Conread position: | 488-724 | 
| Cow position: | chr3:24615655-24615892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 15, 46 | 
| Conread position: | 488-762 | 
| Cow position: | chr3:29359980-29360231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 124, 74 | 
| Conread position: | 488-767 | 
| Cow position: | chr3:59451783-59451499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 23, 40 | 
| Conread position: | 488-769 | 
| Cow position: | chr3:45882083-45881811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 93 | 
| Conread position: | 488-769 | 
| Cow position: | chr3:59597357-59597091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 124, 85 | 
| Conread position: | 488-769 | 
| Cow position: | chr3:83215453-83215167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 488-772 | 
| Cow position: | chr3:3649055-3649313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 123, 69 | 
| Conread position: | 489-597 | 
| Cow position: | chr3:10454027-10453919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 489-615 | 
| Cow position: | chr3:2434556-2434679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 121, 13 | 
| Conread position: | 489-639 | 
| Cow position: | chr3:25290025-25289879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 123, 21 | 
| Conread position: | 489-641 | 
| Cow position: | chr3:53249668-53249521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 122, 84 | 
| Conread position: | 489-642 | 
| Cow position: | chr3:29944043-29943888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 489-644 | 
| Cow position: | chr3:20888478-20888633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 122, 131 | 
| Conread position: | 489-651 | 
| Cow position: | chr3:70925267-70925104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-652 | 
| Cow position: | chr3:44218951-44218787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-652 | 
| Cow position: | chr3:48566506-48566670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-652 | 
| Cow position: | chr3:58562884-58562715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 114, 104 | 
| Conread position: | 489-655 | 
| Cow position: | chr3:27368481-27368650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 489-660 | 
| Cow position: | chr3:39603353-39603525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-671 | 
| Cow position: | chr3:68632572-68632755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 9, 30 | 
| Conread position: | 489-674 | 
| Cow position: | chr3:80541405-80541218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 15, 108 | 
| Conread position: | 489-683 | 
| Cow position: | chr3:37641509-37641316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 122, 97 | 
| Conread position: | 489-688 | 
| Cow position: | chr3:53266661-53266463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 124, 43 | 
| Conread position: | 489-692 | 
| Cow position: | chr3:28883977-28884179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 15, 85 | 
| Conread position: | 489-692 | 
| Cow position: | chr3:73943689-73943892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 122, 61 | 
| Conread position: | 489-694 | 
| Cow position: | chr3:4518001-4518198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 123, 80 | 
| Conread position: | 489-695 | 
| Cow position: | chr3:986198-985993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 489-695 | 
| Cow position: | chr3:59885714-59885519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 122, 68 | 
| Conread position: | 489-696 | 
| Cow position: | chr3:69144879-69144671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-697 | 
| Cow position: | chr3:24589233-24589025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 124, 105 | 
| Conread position: | 489-697 | 
| Cow position: | chr3:81666978-81666776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 124, 12 | 
| Conread position: | 489-699 | 
| Cow position: | chr3:39812242-39812026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 95, 39 | 
| Conread position: | 489-706 | 
| Cow position: | chr3:5703358-5703146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 13 | 
| Conread position: | 489-706 | 
| Cow position: | chr3:53604561-53604778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 122, 94 | 
| Conread position: | 489-708 | 
| Cow position: | chr3:81480840-81480622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 122, 110 | 
| Conread position: | 489-710 | 
| Cow position: | chr3:14517897-14518115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 8, 71 | 
| Conread position: | 489-711 | 
| Cow position: | chr3:8349388-8349602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 123, 33 | 
| Conread position: | 489-711 | 
| Cow position: | chr3:78077373-78077148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 121, 92 | 
| Conread position: | 489-711 | 
| Cow position: | chr3:83770917-83770694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-714 | 
| Cow position: | chr3:5044627-5044853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 489-714 | 
| Cow position: | chr3:11253982-11254208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-714 | 
| Cow position: | chr3:18887755-18887524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 113, 39 | 
| Conread position: | 489-714 | 
| Cow position: | chr3:31055830-31056053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 124, 42 | 
| Conread position: | 489-714 | 
| Cow position: | chr3:45279652-45279426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 489-715 | 
| Cow position: | chr3:7860067-7860294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-715 | 
| Cow position: | chr3:59820092-59819863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-721 | 
| Cow position: | chr3:5305986-5305751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 84, 40 | 
| Conread position: | 489-721 | 
| Cow position: | chr3:25904856-25905096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 115, 86 | 
| Conread position: | 489-723 | 
| Cow position: | chr3:11229188-11229414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 122, 35 | 
| Conread position: | 489-724 | 
| Cow position: | chr3:8591185-8591422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 489-725 | 
| Cow position: | chr3:76024686-76024456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 122, 39 | 
| Conread position: | 489-726 | 
| Cow position: | chr3:22845088-22844847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 122, 149 | 
| Conread position: | 489-726 | 
| Cow position: | chr3:22878770-22878542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 489-726 | 
| Cow position: | chr3:48851784-48852023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-728 | 
| Cow position: | chr3:43233686-43233452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 125, 81 | 
| Conread position: | 489-730 | 
| Cow position: | chr3:36418306-36418535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 121, 12 | 
| Conread position: | 489-730 | 
| Cow position: | chr3:77671299-77671543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 135, 41 | 
| Conread position: | 489-740 | 
| Cow position: | chr3:45822836-45823090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 489-744 | 
| Cow position: | chr3:22887743-22888002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 122, 244 | 
| Conread position: | 489-744 | 
| Cow position: | chr3:29946569-29946317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 125, 18 | 
| Conread position: | 489-748 | 
| Cow position: | chr3:61466986-61467264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 489-749 | 
| Cow position: | chr3:59610536-59610794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 123, 71 | 
| Conread position: | 489-757 | 
| Cow position: | chr3:47316200-47316461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 223, 15 | 
| Conread position: | 489-759 | 
| Cow position: | chr3:20257403-20257133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 123, 68 | 
| Conread position: | 489-762 | 
| Cow position: | chr3:77188626-77188352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 13, 107 | 
| Conread position: | 489-764 | 
| Cow position: | chr3:14194007-14194267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 123, 26 | 
| Conread position: | 489-764 | 
| Cow position: | chr3:21866855-21867124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 67 | 
| Conread position: | 489-764 | 
| Cow position: | chr3:31309171-31309441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 39 | 
| Conread position: | 489-764 | 
| Cow position: | chr3:35055793-35056066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 183, 101 | 
| Conread position: | 489-764 | 
| Cow position: | chr3:54739717-54739976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 125, 42 | 
| Conread position: | 489-764 | 
| Cow position: | chr3:58764903-58765166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 123, 77 | 
| Conread position: | 489-764 | 
| Cow position: | chr3:59474303-59474032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 74 | 
| Conread position: | 489-766 | 
| Cow position: | chr3:67519995-67520261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 12 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:15051769-15052044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 92 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:23877182-23876903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 122, 33 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:36240292-36240012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 124, 42 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:49460743-49461022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 123, 56 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:53094741-53095025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 36, 254 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:54100530-54100813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 240 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:58527560-58527301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 122, 84 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:59945310-59945033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 124, 239 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:63180049-63179770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 13, 125 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:64280755-64281024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 84 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:67929076-67929353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 124, 77 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:71238659-71238381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 33, 107 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:76713129-76713416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 65, 195 | 
| Conread position: | 489-769 | 
| Cow position: | chr3:79098283-79098005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 123, 147 | 
| Conread position: | 489-772 | 
| Cow position: | chr3:14553055-14552781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 90 | 
| Conread position: | 489-772 | 
| Cow position: | chr3:26739241-26739512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 113, 0 | 
| Conread position: | 490-610 | 
| Cow position: | chr3:44415389-44415509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 490-673 | 
| Cow position: | chr3:60186335-60186146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 23, 98 | 
| Conread position: | 490-679 | 
| Cow position: | chr3:24852407-24852602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 56, 38 | 
| Conread position: | 490-684 | 
| Cow position: | chr3:55730284-55730480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 490-693 | 
| Cow position: | chr3:8526197-8526383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 122, 49 | 
| Conread position: | 490-696 | 
| Cow position: | chr3:4271548-4271350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 7, 40 | 
| Conread position: | 490-697 | 
| Cow position: | chr3:56943750-56943949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 122, 11 | 
| Conread position: | 490-701 | 
| Cow position: | chr3:18479114-18479325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 121, 136 | 
| Conread position: | 490-712 | 
| Cow position: | chr3:48072706-48072920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 127, 12 | 
| Conread position: | 490-724 | 
| Cow position: | chr3:31804588-31804815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 172, 75 | 
| Conread position: | 490-725 | 
| Cow position: | chr3:3883638-3883866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 122, 79 | 
| Conread position: | 490-754 | 
| Cow position: | chr3:31361604-31361340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 122, 12 | 
| Conread position: | 490-763 | 
| Cow position: | chr3:57274240-57273979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 49 | 
| Conread position: | 490-764 | 
| Cow position: | chr3:31349928-31350193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 122, 12 | 
| Conread position: | 490-764 | 
| Cow position: | chr3:70333787-70334051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 490-769 | 
| Cow position: | chr3:55124102-55124376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 13, 40 | 
| Conread position: | 491-628 | 
| Cow position: | chr3:79262726-79262866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 85, 114 | 
| Conread position: | 491-669 | 
| Cow position: | chr3:74050527-74050697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 121, 10 | 
| Conread position: | 491-675 | 
| Cow position: | chr3:17105850-17105667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 120, 165 | 
| Conread position: | 491-679 | 
| Cow position: | chr3:28905154-28904965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 491-691 | 
| Cow position: | chr3:54557847-54557657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 121, 70 | 
| Conread position: | 491-693 | 
| Cow position: | chr3:26783327-26783526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 71, 11 | 
| Conread position: | 491-693 | 
| Cow position: | chr3:59681727-59681923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 120, 11 | 
| Conread position: | 491-698 | 
| Cow position: | chr3:75966601-75966805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 80 | 
| Conread position: | 491-700 | 
| Cow position: | chr3:13882337-13882547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 152 | 
| Conread position: | 491-704 | 
| Cow position: | chr3:8522975-8523180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 491-709 | 
| Cow position: | chr3:28902583-28902794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 10 | 
| Conread position: | 491-711 | 
| Cow position: | chr3:9117216-9116990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 13, 185 | 
| Conread position: | 491-716 | 
| Cow position: | chr3:25477973-25477764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 491-722 | 
| Cow position: | chr3:1011673-1011438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 110 | 
| Conread position: | 491-728 | 
| Cow position: | chr3:6182054-6182275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 121, 11 | 
| Conread position: | 491-729 | 
| Cow position: | chr3:71423390-71423606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 122, 8 | 
| Conread position: | 491-741 | 
| Cow position: | chr3:84174485-84174234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 491-760 | 
| Cow position: | chr3:60264543-60264801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 119, 10 | 
| Conread position: | 491-762 | 
| Cow position: | chr3:65969355-65969076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 491-763 | 
| Cow position: | chr3:61894003-61894253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 228, 13 | 
| Conread position: | 491-764 | 
| Cow position: | chr3:7337605-7337871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 12, 39 | 
| Conread position: | 491-764 | 
| Cow position: | chr3:23804684-23804429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 8, 38 | 
| Conread position: | 491-764 | 
| Cow position: | chr3:74234360-74234103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 123, 10 | 
| Conread position: | 491-764 | 
| Cow position: | chr3:77365111-77365385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 31 | 
| Conread position: | 491-767 | 
| Cow position: | chr3:71474226-71474499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 123, 79 | 
| Conread position: | 491-769 | 
| Cow position: | chr3:2392788-2393055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 78 | 
| Conread position: | 491-769 | 
| Cow position: | chr3:15388402-15388122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 8, 39 | 
| Conread position: | 491-769 | 
| Cow position: | chr3:57764395-57764135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 10, 41 | 
| Conread position: | 491-769 | 
| Cow position: | chr3:58317763-58318046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 11 | 
| Conread position: | 492-675 | 
| Cow position: | chr3:11023634-11023443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 492-679 | 
| Cow position: | chr3:1037208-1037017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 492-679 | 
| Cow position: | chr3:22868538-22868725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 125, 9 | 
| Conread position: | 492-684 | 
| Cow position: | chr3:75687750-75687942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 118, 17 | 
| Conread position: | 492-686 | 
| Cow position: | chr3:20911231-20911422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 119, 37 | 
| Conread position: | 492-695 | 
| Cow position: | chr3:35883752-35883953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 119, 187 | 
| Conread position: | 492-701 | 
| Cow position: | chr3:28896841-28897046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 120, 94 | 
| Conread position: | 492-716 | 
| Cow position: | chr3:17304790-17305021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 85, 60 | 
| Conread position: | 492-716 | 
| Cow position: | chr3:30357689-30357480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 492-720 | 
| Cow position: | chr3:70761945-70762165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 120, 9 | 
| Conread position: | 492-722 | 
| Cow position: | chr3:63316307-63316084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 492-726 | 
| Cow position: | chr3:2518361-2518591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 51, 72 | 
| Conread position: | 492-726 | 
| Cow position: | chr3:38248836-38248599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 193 | 
| Conread position: | 492-728 | 
| Cow position: | chr3:80973531-80973297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 188, 113 | 
| Conread position: | 492-763 | 
| Cow position: | chr3:46146549-46146820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 120, 37 | 
| Conread position: | 492-763 | 
| Cow position: | chr3:48363247-48362990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 120, 9 | 
| Conread position: | 492-764 | 
| Cow position: | chr3:7763838-7763569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 119, 155 | 
| Conread position: | 492-764 | 
| Cow position: | chr3:31077545-31077816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 118, 28 | 
| Conread position: | 492-764 | 
| Cow position: | chr3:42434149-42434420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 122, 10 | 
| Conread position: | 492-764 | 
| Cow position: | chr3:76267794-76268066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 88 | 
| Conread position: | 492-769 | 
| Cow position: | chr3:5365845-5365585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 119, 73 | 
| Conread position: | 492-769 | 
| Cow position: | chr3:5374489-5374240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 492-769 | 
| Cow position: | chr3:47417390-47417658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 15, 96 | 
| Conread position: | 492-769 | 
| Cow position: | chr3:58540337-58540619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 68, 157 | 
| Conread position: | 492-775 | 
| Cow position: | chr3:66014498-66014217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 29, 185 | 
| Conread position: | 492-782 | 
| Cow position: | chr3:39912507-39912792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 186, 39 | 
| Conread position: | 493-632 | 
| Cow position: | chr3:72626563-72626704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 493-661 | 
| Cow position: | chr3:34142535-34142698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 493-685 | 
| Cow position: | chr3:69205195-69205007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 118, 38 | 
| Conread position: | 493-696 | 
| Cow position: | chr3:16868002-16867808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 72, 92 | 
| Conread position: | 493-724 | 
| Cow position: | chr3:44960840-44961054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 121, 9 | 
| Conread position: | 493-764 | 
| Cow position: | chr3:26792633-26792386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 121, 31 | 
| Conread position: | 493-764 | 
| Cow position: | chr3:54506886-54506616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 9, 75 | 
| Conread position: | 494-638 | 
| Cow position: | chr3:35586011-35585867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 117, 16 | 
| Conread position: | 494-659 | 
| Cow position: | chr3:3453760-3453594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 494-670 | 
| Cow position: | chr3:67942355-67942532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 494-679 | 
| Cow position: | chr3:52845733-52845551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 118, 75 | 
| Conread position: | 494-679 | 
| Cow position: | chr3:62789772-62789961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 494-689 | 
| Cow position: | chr3:84154583-84154400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 494-705 | 
| Cow position: | chr3:63336671-63336460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 117, 153 | 
| Conread position: | 494-711 | 
| Cow position: | chr3:19006321-19006104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 34, 121 | 
| Conread position: | 494-714 | 
| Cow position: | chr3:20130115-20129895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 119, 100 | 
| Conread position: | 494-714 | 
| Cow position: | chr3:31419873-31419652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 494-725 | 
| Cow position: | chr3:20033969-20034200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 117, 90 | 
| Conread position: | 494-748 | 
| Cow position: | chr3:3275773-3275525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 160, 70 | 
| Conread position: | 494-748 | 
| Cow position: | chr3:8393517-8393278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 118, 22 | 
| Conread position: | 494-764 | 
| Cow position: | chr3:24872870-24872627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 120, 34 | 
| Conread position: | 494-764 | 
| Cow position: | chr3:38035410-38035678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 96, 113 | 
| Conread position: | 494-769 | 
| Cow position: | chr3:5696551-5696822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 80, 56 | 
| Conread position: | 494-769 | 
| Cow position: | chr3:15443548-15443822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 188 | 
| Conread position: | 494-769 | 
| Cow position: | chr3:51578146-51578413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 74 | 
| Conread position: | 494-776 | 
| Cow position: | chr3:45183643-45183931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 90, 229 | 
| Conread position: | 495-623 | 
| Cow position: | chr3:14558937-14558808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 495-667 | 
| Cow position: | chr3:43895886-43896053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 117, 78 | 
| Conread position: | 495-686 | 
| Cow position: | chr3:22403937-22404130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 74, 146 | 
| Conread position: | 495-692 | 
| Cow position: | chr3:23037331-23037527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 119, 52 | 
| Conread position: | 495-692 | 
| Cow position: | chr3:36190077-36189872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 7, 34 | 
| Conread position: | 495-710 | 
| Cow position: | chr3:52487806-52487579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 71, 196 | 
| Conread position: | 495-716 | 
| Cow position: | chr3:54905783-54905576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 116, 62 | 
| Conread position: | 495-716 | 
| Cow position: | chr3:74644737-74644515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 190 | 
| Conread position: | 495-716 | 
| Cow position: | chr3:82366306-82366087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 116, 75 | 
| Conread position: | 495-724 | 
| Cow position: | chr3:76138636-76138425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 116, 108 | 
| Conread position: | 495-725 | 
| Cow position: | chr3:16107198-16107408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 116, 33 | 
| Conread position: | 495-725 | 
| Cow position: | chr3:59702351-59702121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 89, 172 | 
| Conread position: | 495-728 | 
| Cow position: | chr3:54781816-54782065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 71, 116 | 
| Conread position: | 495-744 | 
| Cow position: | chr3:16752077-16752328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 84, 169 | 
| Conread position: | 495-749 | 
| Cow position: | chr3:13329616-13329848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 116, 79 | 
| Conread position: | 495-762 | 
| Cow position: | chr3:73299243-73299001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 9, 30 | 
| Conread position: | 495-764 | 
| Cow position: | chr3:7662034-7661765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 88, 169 | 
| Conread position: | 495-764 | 
| Cow position: | chr3:54435145-54434887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 495-765 | 
| Cow position: | chr3:63845117-63844840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 495-769 | 
| Cow position: | chr3:189051-188771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 118, 16 | 
| Conread position: | 495-769 | 
| Cow position: | chr3:1517336-1517605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 69 | 
| Conread position: | 495-769 | 
| Cow position: | chr3:2506299-2506568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 140 | 
| Conread position: | 495-769 | 
| Cow position: | chr3:22221503-22221227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 72 | 
| Conread position: | 495-769 | 
| Cow position: | chr3:51233927-51234188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 74 | 
| Conread position: | 495-771 | 
| Cow position: | chr3:2648331-2648606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 95 | 
| Conread position: | 495-772 | 
| Cow position: | chr3:65019676-65019961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 36, 92 | 
| Conread position: | 496-653 | 
| Cow position: | chr3:18764281-18764122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 496-653 | 
| Cow position: | chr3:22078254-22078096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 496-656 | 
| Cow position: | chr3:2636758-2636912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 113, 0 | 
| Conread position: | 496-684 | 
| Cow position: | chr3:77098648-77098835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 116, 82 | 
| Conread position: | 496-686 | 
| Cow position: | chr3:64800371-64800562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 496-688 | 
| Cow position: | chr3:61680493-61680301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 115, 148 | 
| Conread position: | 496-691 | 
| Cow position: | chr3:80173175-80172982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 115, 94 | 
| Conread position: | 496-692 | 
| Cow position: | chr3:6288363-6288560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 496-699 | 
| Cow position: | chr3:12178237-12178032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 82, 158 | 
| Conread position: | 496-699 | 
| Cow position: | chr3:35075048-35074853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 115, 70 | 
| Conread position: | 496-710 | 
| Cow position: | chr3:22888838-22889053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 97, 57 | 
| Conread position: | 496-717 | 
| Cow position: | chr3:54350258-54350490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 496-722 | 
| Cow position: | chr3:15950741-15950961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 38, 84 | 
| Conread position: | 496-722 | 
| Cow position: | chr3:17134507-17134286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 115, 79 | 
| Conread position: | 496-725 | 
| Cow position: | chr3:23131992-23132220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 116, 93 | 
| Conread position: | 496-728 | 
| Cow position: | chr3:2638109-2637872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 496-728 | 
| Cow position: | chr3:18459361-18459585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 118, 32 | 
| Conread position: | 496-764 | 
| Cow position: | chr3:15228665-15228908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 116, 46 | 
| Conread position: | 496-769 | 
| Cow position: | chr3:55189574-55189849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 84, 96 | 
| Conread position: | 497-674 | 
| Cow position: | chr3:4931655-4931841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 497-687 | 
| Cow position: | chr3:25702156-25702355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 497-690 | 
| Cow position: | chr3:25735728-25735922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 497-692 | 
| Cow position: | chr3:29234503-29234700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 82, 28 | 
| Conread position: | 497-698 | 
| Cow position: | chr3:9718074-9718275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 114, 184 | 
| Conread position: | 497-704 | 
| Cow position: | chr3:83672030-83671825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 114, 78 | 
| Conread position: | 497-722 | 
| Cow position: | chr3:72777408-72777187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 115, 44 | 
| Conread position: | 497-764 | 
| Cow position: | chr3:16333979-16333713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 238 | 
| Conread position: | 497-764 | 
| Cow position: | chr3:73395290-73395034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 53 | 
| Conread position: | 497-769 | 
| Cow position: | chr3:30222386-30222095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 68, 34 | 
| Conread position: | 498-764 | 
| Cow position: | chr3:73961520-73961787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 499-626 | 
| Cow position: | chr3:44775588-44775452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 499-700 | 
| Cow position: | chr3:80023142-80023335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 112, 32 | 
| Conread position: | 499-722 | 
| Cow position: | chr3:53150506-53150277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 115, 71 | 
| Conread position: | 499-764 | 
| Cow position: | chr3:17058374-17058628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 113, 69 | 
| Conread position: | 499-764 | 
| Cow position: | chr3:17221960-17222233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 499-764 | 
| Cow position: | chr3:49679307-49679044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 86 | 
| Conread position: | 499-776 | 
| Cow position: | chr3:14547172-14546901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 82 | 
| Conread position: | 500-702 | 
| Cow position: | chr3:81400934-81401128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 111, 65 | 
| Conread position: | 500-716 | 
| Cow position: | chr3:23753656-23753458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 111, 69 | 
| Conread position: | 500-769 | 
| Cow position: | chr3:60597709-60597449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 108, 66 | 
| Conread position: | 500-769 | 
| Cow position: | chr3:64010636-64010915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 19, 116 | 
| Conread position: | 501-610 | 
| Cow position: | chr3:52147270-52147379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 65, 50 | 
| Conread position: | 501-618 | 
| Cow position: | chr3:84601586-84601704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 501-620 | 
| Cow position: | chr3:72649815-72649937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 501-621 | 
| Cow position: | chr3:17952763-17952646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 501-642 | 
| Cow position: | chr3:34392054-34392188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 110, 63 | 
| Conread position: | 501-658 | 
| Cow position: | chr3:7923991-7923832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 501-660 | 
| Cow position: | chr3:74515165-74515324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 86, 61 | 
| Conread position: | 501-667 | 
| Cow position: | chr3:26393128-26393293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 111, 82 | 
| Conread position: | 501-677 | 
| Cow position: | chr3:2538408-2538238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 96, 60 | 
| Conread position: | 501-680 | 
| Cow position: | chr3:67737491-67737311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 501-684 | 
| Cow position: | chr3:73924869-73925044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 110, 56 | 
| Conread position: | 501-687 | 
| Cow position: | chr3:51153215-51153037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 501-691 | 
| Cow position: | chr3:22734090-22734283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 110, 27 | 
| Conread position: | 501-693 | 
| Cow position: | chr3:6886397-6886202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 61, 109 | 
| Conread position: | 501-708 | 
| Cow position: | chr3:46559545-46559749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 111, 60 | 
| Conread position: | 501-710 | 
| Cow position: | chr3:83699697-83699904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 110, 94 | 
| Conread position: | 501-716 | 
| Cow position: | chr3:68303489-68303274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 182 | 
| Conread position: | 501-718 | 
| Cow position: | chr3:15160688-15160475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 111, 72 | 
| Conread position: | 501-720 | 
| Cow position: | chr3:20996831-20997048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 110, 60 | 
| Conread position: | 501-722 | 
| Cow position: | chr3:36914241-36914002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 501-722 | 
| Cow position: | chr3:49996546-49996771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 501-723 | 
| Cow position: | chr3:23408193-23408404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 113, 30 | 
| Conread position: | 501-723 | 
| Cow position: | chr3:32585324-32585102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 111, 211 | 
| Conread position: | 501-730 | 
| Cow position: | chr3:8181778-8182008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 72, 141 | 
| Conread position: | 501-738 | 
| Cow position: | chr3:73335450-73335220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 111, 28 | 
| Conread position: | 501-747 | 
| Cow position: | chr3:621612-621377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 60, 157 | 
| Conread position: | 501-762 | 
| Cow position: | chr3:53222183-53221928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 113, 64 | 
| Conread position: | 501-764 | 
| Cow position: | chr3:10958073-10958330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 110, 28 | 
| Conread position: | 501-764 | 
| Cow position: | chr3:65413095-65413367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 25, 240 | 
| Conread position: | 501-764 | 
| Cow position: | chr3:68616164-68616414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 111, 72 | 
| Conread position: | 501-766 | 
| Cow position: | chr3:10841987-10841723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 110, 231 | 
| Conread position: | 501-769 | 
| Cow position: | chr3:17936676-17936933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 106, 68 | 
| Conread position: | 501-769 | 
| Cow position: | chr3:37041587-37041322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 23 | 
| Conread position: | 501-769 | 
| Cow position: | chr3:75158526-75158267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 111, 27 | 
| Conread position: | 501-769 | 
| Cow position: | chr3:77582277-77582017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 95, 72 | 
| Conread position: | 502-673 | 
| Cow position: | chr3:76133841-76134014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 47, 26 | 
| Conread position: | 502-695 | 
| Cow position: | chr3:59272001-59271812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 108, 82 | 
| Conread position: | 502-711 | 
| Cow position: | chr3:5149782-5149992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 502-722 | 
| Cow position: | chr3:11281939-11281718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 502-724 | 
| Cow position: | chr3:75570276-75570502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 66, 51 | 
| Conread position: | 502-725 | 
| Cow position: | chr3:33252722-33252940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 112, 71 | 
| Conread position: | 502-745 | 
| Cow position: | chr3:21112472-21112714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 177, 85 | 
| Conread position: | 502-754 | 
| Cow position: | chr3:10668709-10668957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 69, 111 | 
| Conread position: | 502-764 | 
| Cow position: | chr3:54373687-54373946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 112, 228 | 
| Conread position: | 502-764 | 
| Cow position: | chr3:59040740-59040481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 112, 90 | 
| Conread position: | 502-769 | 
| Cow position: | chr3:44932682-44932420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 110, 62 | 
| Conread position: | 502-769 | 
| Cow position: | chr3:73837548-73837809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 108, 89 | 
| Conread position: | 503-695 | 
| Cow position: | chr3:77171487-77171294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 503-699 | 
| Cow position: | chr3:82195653-82195461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 36 | 
| Conread position: | 503-700 | 
| Cow position: | chr3:70756470-70756667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 192 | 
| Conread position: | 503-705 | 
| Cow position: | chr3:20021437-20021238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 109, 71 | 
| Conread position: | 503-758 | 
| Cow position: | chr3:34784401-34784122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 503-764 | 
| Cow position: | chr3:56476843-56476591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 111, 41 | 
| Conread position: | 504-685 | 
| Cow position: | chr3:42796350-42796534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 107, 86 | 
| Conread position: | 505-665 | 
| Cow position: | chr3:56754368-56754524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 105, 85 | 
| Conread position: | 505-716 | 
| Cow position: | chr3:39996726-39996933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 106, 26 | 
| Conread position: | 505-732 | 
| Cow position: | chr3:48483345-48483120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 106, 23 | 
| Conread position: | 506-675 | 
| Cow position: | chr3:22675941-22676111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 87, 73 | 
| Conread position: | 506-680 | 
| Cow position: | chr3:83199679-83199505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 106, 84 | 
| Conread position: | 506-692 | 
| Cow position: | chr3:62312964-62312778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 78, 87 | 
| Conread position: | 506-692 | 
| Cow position: | chr3:62370223-62370037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 87 | 
| Conread position: | 506-697 | 
| Cow position: | chr3:56932620-56932434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 74, 92 | 
| Conread position: | 506-701 | 
| Cow position: | chr3:14589064-14589268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 105, 97 | 
| Conread position: | 506-719 | 
| Cow position: | chr3:653913-654128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 506-722 | 
| Cow position: | chr3:26603380-26603602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 28, 214 | 
| Conread position: | 506-729 | 
| Cow position: | chr3:46305628-46305411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 49, 120 | 
| Conread position: | 506-735 | 
| Cow position: | chr3:18855244-18855015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 120, 108 | 
| Conread position: | 506-769 | 
| Cow position: | chr3:63269400-63269130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 24, 105 | 
| Conread position: | 506-769 | 
| Cow position: | chr3:74500423-74500146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 507-725 | 
| Cow position: | chr3:74787590-74787380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 105, 10 | 
| Conread position: | 507-743 | 
| Cow position: | chr3:72745390-72745631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 78, 220 | 
| Conread position: | 507-763 | 
| Cow position: | chr3:73820200-73820457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 21 | 
| Conread position: | 507-763 | 
| Cow position: | chr3:83988699-83988444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 21 | 
| Conread position: | 508-658 | 
| Cow position: | chr3:28643575-28643427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 103, 75 | 
| Conread position: | 508-661 | 
| Cow position: | chr3:10115459-10115311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 104, 75 | 
| Conread position: | 508-673 | 
| Cow position: | chr3:5003796-5003634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 103, 73 | 
| Conread position: | 508-687 | 
| Cow position: | chr3:83812442-83812259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 66, 102 | 
| Conread position: | 508-714 | 
| Cow position: | chr3:949135-948928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 508-714 | 
| Cow position: | chr3:80037370-80037570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 105, 72 | 
| Conread position: | 508-719 | 
| Cow position: | chr3:81909455-81909656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 104, 42 | 
| Conread position: | 508-764 | 
| Cow position: | chr3:5100585-5100854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 49, 240 | 
| Conread position: | 508-769 | 
| Cow position: | chr3:69416614-69416875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 103, 223 | 
| Conread position: | 509-656 | 
| Cow position: | chr3:57706589-57706739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 509-658 | 
| Cow position: | chr3:57336942-57336790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 509-686 | 
| Cow position: | chr3:15792259-15792080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 509-705 | 
| Cow position: | chr3:77276302-77276489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 96, 56 | 
| Conread position: | 509-711 | 
| Cow position: | chr3:28903755-28903960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 89, 38 | 
| Conread position: | 509-712 | 
| Cow position: | chr3:72255255-72255457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 102, 113 | 
| Conread position: | 509-726 | 
| Cow position: | chr3:1028484-1028698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 102, 81 | 
| Conread position: | 509-732 | 
| Cow position: | chr3:81923630-81923857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 61, 48 | 
| Conread position: | 509-758 | 
| Cow position: | chr3:40145630-40145385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 198 | 
| Conread position: | 509-763 | 
| Cow position: | chr3:53046495-53046749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 157 | 
| Conread position: | 509-764 | 
| Cow position: | chr3:74079475-74079726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 103, 64 | 
| Conread position: | 509-764 | 
| Cow position: | chr3:82055965-82056196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 102, 43 | 
| Conread position: | 509-766 | 
| Cow position: | chr3:19793427-19793679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 73 | 
| Conread position: | 509-766 | 
| Cow position: | chr3:75238623-75238368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 219 | 
| Conread position: | 509-769 | 
| Cow position: | chr3:2675195-2674936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 218 | 
| Conread position: | 509-769 | 
| Cow position: | chr3:59000600-59000844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 101, 66 | 
| Conread position: | 509-769 | 
| Cow position: | chr3:67930007-67930275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 61, 142 | 
| Conread position: | 509-770 | 
| Cow position: | chr3:66900564-66900830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 13 | 
| Conread position: | 510-661 | 
| Cow position: | chr3:53552822-53552967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 102, 73 | 
| Conread position: | 510-684 | 
| Cow position: | chr3:6579642-6579478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 101, 18 | 
| Conread position: | 510-758 | 
| Cow position: | chr3:48477881-48478114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 102, 19 | 
| Conread position: | 510-764 | 
| Cow position: | chr3:74119268-74119527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 104, 21 | 
| Conread position: | 510-766 | 
| Cow position: | chr3:13380116-13380376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 101, 54 | 
| Conread position: | 510-769 | 
| Cow position: | chr3:7566259-7566517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 59 | 
| Conread position: | 511-696 | 
| Cow position: | chr3:81880329-81880143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 511-716 | 
| Cow position: | chr3:56704149-56704363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 511-728 | 
| Cow position: | chr3:28648664-28648448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 103, 68 | 
| Conread position: | 511-748 | 
| Cow position: | chr3:53083822-53084062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 81, 68 | 
| Conread position: | 511-749 | 
| Cow position: | chr3:79196924-79196684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 58, 77 | 
| Conread position: | 511-764 | 
| Cow position: | chr3:70334531-70334782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 217 | 
| Conread position: | 511-769 | 
| Cow position: | chr3:56612523-56612268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 103, 22 | 
| Conread position: | 511-769 | 
| Cow position: | chr3:79270809-79271050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 138, 30 | 
| Conread position: | 512-673 | 
| Cow position: | chr3:5737906-5737751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 158, 63 | 
| Conread position: | 512-702 | 
| Cow position: | chr3:37848696-37848887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 71, 114 | 
| Conread position: | 512-729 | 
| Cow position: | chr3:39988092-39988290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 512-761 | 
| Cow position: | chr3:11987488-11987244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 102, 61 | 
| Conread position: | 512-764 | 
| Cow position: | chr3:12978455-12978703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 98, 78 | 
| Conread position: | 513-645 | 
| Cow position: | chr3:6547585-6547452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 513-699 | 
| Cow position: | chr3:23265162-23265360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 61, 37 | 
| Conread position: | 513-725 | 
| Cow position: | chr3:85118528-85118318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 53, 57 | 
| Conread position: | 513-764 | 
| Cow position: | chr3:16656326-16656576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 74, 110 | 
| Conread position: | 513-765 | 
| Cow position: | chr3:2484161-2483914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 27, 63 | 
| Conread position: | 513-769 | 
| Cow position: | chr3:68627528-68627779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 97, 79 | 
| Conread position: | 514-763 | 
| Cow position: | chr3:11640894-11640641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 223 | 
| Conread position: | 515-764 | 
| Cow position: | chr3:84250392-84250632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 96, 52 | 
| Conread position: | 516-687 | 
| Cow position: | chr3:70431590-70431415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 46, 123 | 
| Conread position: | 517-666 | 
| Cow position: | chr3:49732895-49733045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 56, 104 | 
| Conread position: | 517-705 | 
| Cow position: | chr3:35239166-35238982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 97, 66 | 
| Conread position: | 517-722 | 
| Cow position: | chr3:62864233-62864021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 518-764 | 
| Cow position: | chr3:52608335-52608092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 94, 60 | 
| Conread position: | 520-658 | 
| Cow position: | chr3:32361855-32361989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 91, 34 | 
| Conread position: | 520-711 | 
| Cow position: | chr3:18185229-18185038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 93, 82 | 
| Conread position: | 520-714 | 
| Cow position: | chr3:52643780-52643974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 31, 96 | 
| Conread position: | 520-728 | 
| Cow position: | chr3:33048240-33048450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 91, 73 | 
| Conread position: | 521-748 | 
| Cow position: | chr3:76931965-76932177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 522-707 | 
| Cow position: | chr3:18326676-18326857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 90, 157 | 
| Conread position: | 522-723 | 
| Cow position: | chr3:46266353-46266153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 180, 0 | 
| Conread position: | 522-739 | 
| Cow position: | chr3:25945245-25945028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 87, 27 | 
| Conread position: | 523-670 | 
| Cow position: | chr3:17039766-17039616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 524-676 | 
| Cow position: | chr3:73162248-73162390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 88, 28 | 
| Conread position: | 524-754 | 
| Cow position: | chr3:74134855-74134622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 41, 29 | 
| Conread position: | 526-696 | 
| Cow position: | chr3:19788685-19788852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 84, 43 | 
| Conread position: | 526-700 | 
| Cow position: | chr3:58432301-58432471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 86, 40 | 
| Conread position: | 526-764 | 
| Cow position: | chr3:44102113-44101884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 88, 48 | 
| Conread position: | 526-764 | 
| Cow position: | chr3:72391234-72390998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 62, 205 | 
| Conread position: | 526-769 | 
| Cow position: | chr3:55010025-55010256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 86, 42 | 
| Conread position: | 527-695 | 
| Cow position: | chr3:38283416-38283585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 9, 68 | 
| Conread position: | 527-714 | 
| Cow position: | chr3:18498163-18497976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 86, 67 | 
| Conread position: | 527-729 | 
| Cow position: | chr3:38783753-38783551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 84, 44 | 
| Conread position: | 529-635 | 
| Cow position: | chr3:76300695-76300588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 529-710 | 
| Cow position: | chr3:44341894-44342075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 529-731 | 
| Cow position: | chr3:30055306-30055514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 529-771 | 
| Cow position: | chr3:14632831-14633081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 33, 49 | 
| Conread position: | 531-677 | 
| Cow position: | chr3:25060470-25060324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 53, 29 | 
| Conread position: | 531-680 | 
| Cow position: | chr3:35582982-35582834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 80, 50 | 
| Conread position: | 532-691 | 
| Cow position: | chr3:81065416-81065267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 80, 34 | 
| Conread position: | 532-769 | 
| Cow position: | chr3:53572609-53572846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 68, 211 | 
| Conread position: | 534-658 | 
| Cow position: | chr3:44622640-44622768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 534-691 | 
| Cow position: | chr3:25037856-25038009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 78, 46 | 
| Conread position: | 534-764 | 
| Cow position: | chr3:61323472-61323244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 77, 184 | 
| Conread position: | 534-769 | 
| Cow position: | chr3:15751576-15751813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 78, 52 | 
| Conread position: | 535-711 | 
| Cow position: | chr3:6690140-6689963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 535-722 | 
| Cow position: | chr3:21642133-21641940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 30, 135 | 
| Conread position: | 535-727 | 
| Cow position: | chr3:7045447-7045253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 163, 0 | 
| Conread position: | 538-764 | 
| Cow position: | chr3:73709181-73708960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 74, 32 | 
| Conread position: | 542-770 | 
| Cow position: | chr3:32409350-32409117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 39, 177 | 
| Conread position: | 546-764 | 
| Cow position: | chr3:28898093-28898309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 43, 186 | 
| Conread position: | 547-769 | 
| Cow position: | chr3:75045745-75045969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 29, 122 | 
| Conread position: | 549-762 | 
| Cow position: | chr3:79645304-79645526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 556-691 | 
| Cow position: | chr3:14263511-14263376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 558-769 | 
| Cow position: | chr3:12711798-12712010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 558-770 | 
| Cow position: | chr3:74900522-74900732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 18, 58 | 
| Conread position: | 559-695 | 
| Cow position: | chr3:1533988-1534126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 559-762 | 
| Cow position: | chr3:17934821-17935025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 26, 173 | 
| Conread position: | 559-764 | 
| Cow position: | chr3:5366884-5366683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 53, 100 | 
| Conread position: | 559-764 | 
| Cow position: | chr3:59588629-59588432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 23, 115 | 
| Conread position: | 559-764 | 
| Cow position: | chr3:84243654-84243855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 559-769 | 
| Cow position: | chr3:70402012-70401809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 53, 105 | 
| Conread position: | 560-695 | 
| Cow position: | chr3:15683038-15683171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 52, 34 | 
| Conread position: | 560-696 | 
| Cow position: | chr3:78201726-78201588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 16, 61 | 
| Conread position: | 560-716 | 
| Cow position: | chr3:28258208-28258053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 560-727 | 
| Cow position: | chr3:44330322-44330489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 52, 152 | 
| Conread position: | 560-763 | 
| Cow position: | chr3:81470979-81471181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 20, 173 | 
| Conread position: | 560-764 | 
| Cow position: | chr3:10104153-10103959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 52, 22 | 
| Conread position: | 560-764 | 
| Cow position: | chr3:13507583-13507377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 52, 43 | 
| Conread position: | 560-764 | 
| Cow position: | chr3:49383063-49382860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 54, 32 | 
| Conread position: | 560-764 | 
| Cow position: | chr3:59621533-59621734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 52, 168 | 
| Conread position: | 560-764 | 
| Cow position: | chr3:59692001-59691810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 52, 22 | 
| Conread position: | 560-764 | 
| Cow position: | chr3:66883825-66884027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 7, 110 | 
| Conread position: | 560-764 | 
| Cow position: | chr3:67543755-67543955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 54, 33 | 
| Conread position: | 560-764 | 
| Cow position: | chr3:80581770-80581577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 52, 104 | 
| Conread position: | 560-764 | 
| Cow position: | chr3:84175709-84175913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 52, 30 | 
| Conread position: | 560-769 | 
| Cow position: | chr3:62789060-62789272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 561-765 | 
| Cow position: | chr3:48296812-48296621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 52, 103 | 
| Conread position: | 561-769 | 
| Cow position: | chr3:53113289-53113081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 51, 151 | 
| Conread position: | 562-658 | 
| Cow position: | chr3:28415874-28415778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 98 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 51, 30 | 
| Conread position: | 562-683 | 
| Cow position: | chr3:2179231-2179110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 49, 93 | 
| Conread position: | 562-722 | 
| Cow position: | chr3:84157332-84157492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 49, 28 | 
| Conread position: | 562-727 | 
| Cow position: | chr3:20515705-20515871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 562-769 | 
| Cow position: | chr3:22510136-22509934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 52, 28 | 
| Conread position: | 563-705 | 
| Cow position: | chr3:49790698-49790843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 563-712 | 
| Cow position: | chr3:64373044-64373194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 563-720 | 
| Cow position: | chr3:77589626-77589469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 49, 149 | 
| Conread position: | 563-728 | 
| Cow position: | chr3:82629427-82629262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 45, 39 | 
| Conread position: | 563-758 | 
| Cow position: | chr3:16254727-16254911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 22, 103 | 
| Conread position: | 563-764 | 
| Cow position: | chr3:35621410-35621215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 54, 23 | 
| Conread position: | 563-769 | 
| Cow position: | chr3:52017883-52017676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 49, 173 | 
| Conread position: | 563-769 | 
| Cow position: | chr3:52863071-52863276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 43, 157 | 
| Conread position: | 563-771 | 
| Cow position: | chr3:55984210-55984000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 51, 89 | 
| Conread position: | 564-684 | 
| Cow position: | chr3:4181199-4181322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 564-692 | 
| Cow position: | chr3:61133749-61133621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 48, 125 | 
| Conread position: | 564-725 | 
| Cow position: | chr3:57877677-57877515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 564-728 | 
| Cow position: | chr3:61279019-61278856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 48, 56 | 
| Conread position: | 566-705 | 
| Cow position: | chr3:84239094-84239234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 566-730 | 
| Cow position: | chr3:7428109-7427947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 13, 99 | 
| Conread position: | 566-749 | 
| Cow position: | chr3:27727723-27727905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 566-769 | 
| Cow position: | chr3:57760607-57760407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 161 | 
| Conread position: | 567-769 | 
| Cow position: | chr3:43727179-43726984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 38, 53 | 
| Conread position: | 568-677 | 
| Cow position: | chr3:53256634-53256525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 46, 22 | 
| Conread position: | 568-759 | 
| Cow position: | chr3:73461073-73460881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 51, 72 | 
| Conread position: | 568-769 | 
| Cow position: | chr3:8733250-8733441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 17, 95 | 
| Conread position: | 568-769 | 
| Cow position: | chr3:32457300-32457108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 157, 0 | 
| Conread position: | 568-771 | 
| Cow position: | chr3:2680620-2680423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 43, 89 | 
| Conread position: | 569-725 | 
| Cow position: | chr3:21997682-21997839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 569-764 | 
| Cow position: | chr3:46901304-46901110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 20, 34 | 
| Conread position: | 569-767 | 
| Cow position: | chr3:68059419-68059220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 148, 7 | 
| Conread position: | 569-769 | 
| Cow position: | chr3:8394050-8393844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 569-769 | 
| Cow position: | chr3:59883964-59884164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 43, 16 | 
| Conread position: | 569-769 | 
| Cow position: | chr3:72503790-72503991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 570-723 | 
| Cow position: | chr3:83822482-83822633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 10, 21 | 
| Conread position: | 570-728 | 
| Cow position: | chr3:68130185-68130337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 15, 46 | 
| Conread position: | 570-748 | 
| Cow position: | chr3:28735408-28735585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 42, 51 | 
| Conread position: | 570-750 | 
| Cow position: | chr3:27940038-27940212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 44, 94 | 
| Conread position: | 570-764 | 
| Cow position: | chr3:67704651-67704455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 571-706 | 
| Cow position: | chr3:24372025-24371890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 41, 89 | 
| Conread position: | 571-725 | 
| Cow position: | chr3:8901733-8901579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 39, 96 | 
| Conread position: | 571-764 | 
| Cow position: | chr3:82461283-82461091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 43, 156 | 
| Conread position: | 571-769 | 
| Cow position: | chr3:24935468-24935278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 41, 35 | 
| Conread position: | 571-769 | 
| Cow position: | chr3:80053440-80053631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 572-768 | 
| Cow position: | chr3:31504993-31505190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 573-769 | 
| Cow position: | chr3:79292929-79292737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 41, 22 | 
| Conread position: | 574-764 | 
| Cow position: | chr3:5097307-5097119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 37, 18 | 
| Conread position: | 574-764 | 
| Cow position: | chr3:57624565-57624377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 40, 157 | 
| Conread position: | 574-769 | 
| Cow position: | chr3:14626049-14626249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 38, 144 | 
| Conread position: | 574-769 | 
| Cow position: | chr3:19404397-19404213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 40, 12 | 
| Conread position: | 575-725 | 
| Cow position: | chr3:53904553-53904406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 37, 20 | 
| Conread position: | 575-728 | 
| Cow position: | chr3:67959822-67959970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 37, 19 | 
| Conread position: | 575-772 | 
| Cow position: | chr3:38691308-38691502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 37, 7 | 
| Conread position: | 575-775 | 
| Cow position: | chr3:23667720-23667523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 39, 32 | 
| Conread position: | 577-764 | 
| Cow position: | chr3:20993912-20993724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 17, 127 | 
| Conread position: | 577-778 | 
| Cow position: | chr3:56943505-56943710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 37, 151 | 
| Conread position: | 579-722 | 
| Cow position: | chr3:58940221-58940078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 33, 112 | 
| Conread position: | 579-757 | 
| Cow position: | chr3:2216464-2216285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 33, 151 | 
| Conread position: | 579-764 | 
| Cow position: | chr3:26960492-26960677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 35, 153 | 
| Conread position: | 580-698 | 
| Cow position: | chr3:40199200-40199319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 581-763 | 
| Cow position: | chr3:42423234-42423418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 32, 73 | 
| Conread position: | 581-769 | 
| Cow position: | chr3:55271951-55272139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 33, 133 | 
| Conread position: | 581-769 | 
| Cow position: | chr3:66292083-66292269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 33, 9 | 
| Conread position: | 582-708 | 
| Cow position: | chr3:11705344-11705217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 582-753 | 
| Cow position: | chr3:58973388-58973217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 30, 16 | 
| Conread position: | 582-764 | 
| Cow position: | chr3:34271007-34270828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 30, 80 | 
| Conread position: | 582-769 | 
| Cow position: | chr3:4050286-4050102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 30, 114 | 
| Conread position: | 582-769 | 
| Cow position: | chr3:49650481-49650294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 30, 162 | 
| Conread position: | 582-769 | 
| Cow position: | chr3:58767356-58767167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 583-762 | 
| Cow position: | chr3:37599336-37599512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 31, 149 | 
| Conread position: | 583-763 | 
| Cow position: | chr3:73764107-73764281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 10, 71 | 
| Conread position: | 584-728 | 
| Cow position: | chr3:22871759-22871897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 585-722 | 
| Cow position: | chr3:50023876-50024009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 29, 61 | 
| Conread position: | 585-729 | 
| Cow position: | chr3:51349913-51349768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 586-725 | 
| Cow position: | chr3:5249293-5249428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 28, 100 | 
| Conread position: | 586-729 | 
| Cow position: | chr3:41652465-41652321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 586-762 | 
| Cow position: | chr3:83928335-83928162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 28, 131 | 
| Conread position: | 586-764 | 
| Cow position: | chr3:74088612-74088787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 138, 146 | 
| Conread position: | 586-764 | 
| Cow position: | chr3:74846620-74846799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 26, 126 | 
| Conread position: | 587-716 | 
| Cow position: | chr3:11292160-11292290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 589-769 | 
| Cow position: | chr3:56292-56469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 24, 5 | 
| Conread position: | 591-769 | 
| Cow position: | chr3:74502241-74502412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 21, 140 | 
| Conread position: | 592-763 | 
| Cow position: | chr3:38347273-38347107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 20, 72 | 
| Conread position: | 592-764 | 
| Cow position: | chr3:34669650-34669814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 20, 99 | 
| Conread position: | 592-771 | 
| Cow position: | chr3:59101910-59101735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 22, 74 | 
| Conread position: | 593-769 | 
| Cow position: | chr3:35852389-35852567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 594-766 | 
| Cow position: | chr3:55085088-55085266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 594-769 | 
| Cow position: | chr3:26920991-26920815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 18, 102 | 
| Conread position: | 594-781 | 
| Cow position: | chr3:17895929-17895738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 18, 32 | 
| Conread position: | 595-764 | 
| Cow position: | chr3:72676171-72676005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 17, 127 | 
| Conread position: | 595-769 | 
| Cow position: | chr3:46541749-46541920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 17, 137 | 
| Conread position: | 596-722 | 
| Cow position: | chr3:58968824-58968951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 596-769 | 
| Cow position: | chr3:3472119-3471945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 18, 107 | 
| Conread position: | 596-771 | 
| Cow position: | chr3:80468599-80468770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 16, 41 | 
| Conread position: | 597-764 | 
| Cow position: | chr3:81277390-81277558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 598-764 | 
| Cow position: | chr3:11712043-11711874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 600-764 | 
| Cow position: | chr3:27545744-27545909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 12, 111 | 
| Conread position: | 600-769 | 
| Cow position: | chr3:3638253-3638095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 12, 64 | 
| Conread position: | 601-771 | 
| Cow position: | chr3:22089204-22089372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 46, 52 | 
| Conread position: | 610-764 | 
| Cow position: | chr3:78896711-78896560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 611-763 | 
| Cow position: | chr3:23444825-23444983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 615-754 | 
| Cow position: | chr3:45222092-45222233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 14, 119 | 
| Conread position: | 615-763 | 
| Cow position: | chr3:39171427-39171569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 616-772 | 
| Cow position: | chr3:34937902-34937748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 121, 54 | 
| Conread position: | 620-764 | 
| Cow position: | chr3:74878535-74878676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 641-769 | 
| Cow position: | chr3:43528199-43528335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 41, 0 | 
Show alignments to all cow chromosomes.
