Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8041L17.5 |
| Conread position: | 1-1308 |
| Cow position: | chr15:32089888-32088551 (view UCSC Genome Browser custom track) |
| Alignm length: | 1347 |
| Alignm identity: | 1074 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 342 |
| Conread position: | 2-1308 |
| Cow position: | chr15:32077695-32076360 (view UCSC Genome Browser custom track) |
| Alignm length: | 1344 |
| Alignm identity: | 1073 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 275 |
| Conread position: | 74-1308 |
| Cow position: | chr15:32095332-32094094 (view UCSC Genome Browser custom track) |
| Alignm length: | 1253 |
| Alignm identity: | 993 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 166 |
| Conread position: | 214-488 |
| Cow position: | chr15:32079862-32079580 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 123, 42 |
| Conread position: | 567-958 |
| Cow position: | chr15:31914496-31914887 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 567-958 |
| Cow position: | chr15:31938886-31938495 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 568-1306 |
| Cow position: | chr15:33261966-33261228 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 437 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 158, 165 |
| Conread position: | 588-1303 |
| Cow position: | chr15:31158832-31159547 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 424 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 121, 125 |
| Conread position: | 588-1303 |
| Cow position: | chr15:31184144-31184859 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 416 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 138, 145 |
| Conread position: | 591-1300 |
| Cow position: | chr15:31971170-31971879 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 428 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 58, 65 |
| Conread position: | 593-956 |
| Cow position: | chr15:31339029-31338666 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 234, 246 |
| Conread position: | 593-1141 |
| Cow position: | chr15:31326271-31325723 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 327 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 234, 246 |
| Conread position: | 593-1142 |
| Cow position: | chr15:31349056-31348507 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 235, 246 |
| Conread position: | 593-1301 |
| Cow position: | chr15:31868775-31869483 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 251 |
| Conread position: | 594-1303 |
| Cow position: | chr15:31403932-31403223 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 405 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 267, 274 |
| Conread position: | 594-1306 |
| Cow position: | chr15:32216631-32217343 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 424 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 597-1306 |
| Cow position: | chr15:32258287-32257578 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 598-993 |
| Cow position: | chr15:31287357-31287753 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 598-993 |
| Cow position: | chr15:31295371-31295767 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 600-1243 |
| Cow position: | chr15:32295059-32294416 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 391 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 227, 239 |
| Conread position: | 601-1301 |
| Cow position: | chr15:32233120-32233823 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 132 |
| Conread position: | 601-1303 |
| Cow position: | chr15:31146631-31147333 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 426 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 195, 201 |
| Conread position: | 601-1303 |
| Cow position: | chr15:31170463-31171159 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 426 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 601-1306 |
| Cow position: | chr15:32273072-32273774 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 424 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 220, 216 |
| Conread position: | 602-964 |
| Cow position: | chr15:32046468-32046103 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 134 |
| Conread position: | 603-958 |
| Cow position: | chr15:31963160-31963515 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 603-1304 |
| Cow position: | chr15:32030441-32029743 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 412 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 244, 253 |
| Conread position: | 604-979 |
| Cow position: | chr15:31378713-31379088 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 649-1106 |
| Cow position: | chr15:31411540-31411084 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 334, 9 |
| Conread position: | 671-961 |
| Cow position: | chr15:31308015-31308305 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 732-1121 |
| Cow position: | chr15:33217868-33217479 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 153, 179 |
Show alignments to all cow chromosomes.