Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042B01.3 |
| Conread position: | 1-419 |
| Cow position: | chr10:21939048-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 299, 0 |
| Conread position: | 1-468 |
| Cow position: | chr10:9010292-9009825 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 295 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 177, 193 |
| Conread position: | 1-480 |
| Cow position: | chr10:8996480-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 193 |
| Conread position: | 1-512 |
| Cow position: | chr10:8996396-8995894 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 103 |
| Conread position: | 1-542 |
| Cow position: | chr10:9010376-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 286 |
| Conread position: | 1-547 |
| Cow position: | chr10:8996564-8996019 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 0 |
| Conread position: | 1-564 |
| Cow position: | chr10:9010460-9009895 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 1-571 |
| Cow position: | chr10:8996648-8996076 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 548, 0 |
| Conread position: | 1-571 |
| Cow position: | chr10:8996732-8996160 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 103 |
| Conread position: | 1-571 |
| Cow position: | chr10:8996816-8996244 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 0 |
| Conread position: | 3-304 |
| Cow position: | chr10:9031363-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 99, 111 |
| Conread position: | 19-553 |
| Cow position: | chr10:9010526-9009992 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 168 |
| Conread position: | 20-503 |
| Cow position: | chr10:21939113-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 307 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 174, 161 |
| Conread position: | 25-388 |
| Cow position: | chr10:9031301-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-575 |
| Cow position: | chr10:21939192-21938642 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 332 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 78, 90 |
| Conread position: | 45-513 |
| Cow position: | chr10:9010584-9010116 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 295 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 222, 214 |
| Conread position: | 52-553 |
| Cow position: | chr10:8996933-8996432 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 52-566 |
| Cow position: | chr10:8996849-8996333 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 74-503 |
| Cow position: | chr10:9031182-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 76-571 |
| Cow position: | chr10:21939379-21938896 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 127, 122 |
| Conread position: | 79-518 |
| Cow position: | chr10:21939222-21938783 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 195, 208 |
| Conread position: | 153-564 |
| Cow position: | chr10:9031177-9031590 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 259 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 109, 119 |
| Conread position: | 212-566 |
| Cow position: | chr10:9010585-9010229 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 22 |
Show alignments to all cow chromosomes.