Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042B01.3 |
| Conread position: | 1-303 |
| Cow position: | chr13:39984601-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 185, 191 |
| Conread position: | 1-347 |
| Cow position: | chr13:39984517-39984863 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 286, 270 |
| Conread position: | 1-425 |
| Cow position: | chr13:39984433-39984857 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 279 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 105, 95 |
| Conread position: | 1-502 |
| Cow position: | chr13:39930678-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 34, 6 |
| Conread position: | 1-531 |
| Cow position: | chr13:39984265-39984794 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 112 |
| Conread position: | 1-539 |
| Cow position: | chr13:39983845-39984383 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 1-539 |
| Cow position: | chr13:39984013-39984551 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 191 |
| Conread position: | 1-555 |
| Cow position: | chr13:39984181-39984737 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 540, 0 |
| Conread position: | 1-556 |
| Cow position: | chr13:56333745-56334307 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 353 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 106, 118 |
| Conread position: | 1-557 |
| Cow position: | chr13:39984097-39984655 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 112 |
| Conread position: | 4-555 |
| Cow position: | chr13:56317295-56317839 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 5-564 |
| Cow position: | chr13:39983933-39984494 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 525, 521 |
| Conread position: | 7-515 |
| Cow position: | chr13:39984355-39984863 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 14 |
| Conread position: | 19-376 |
| Cow position: | chr13:56292151-56291793 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 25-293 |
| Cow position: | chr13:56292061-56291792 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 153, 165 |
| Conread position: | 25-547 |
| Cow position: | chr13:56333517-56334038 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 66, 72 |
| Conread position: | 26-559 |
| Cow position: | chr13:56292301-56291777 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 340 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 30-352 |
| Cow position: | chr13:24162460-24162783 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 165 |
| Conread position: | 30-503 |
| Cow position: | chr13:22124734-22125208 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 163 |
| Conread position: | 34-547 |
| Cow position: | chr13:56333694-56334215 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 37-566 |
| Cow position: | chr13:39930629-39931158 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 326 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 44-553 |
| Cow position: | chr13:39983720-39984229 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 54-316 |
| Cow position: | chr13:56334059-56334321 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 57-479 |
| Cow position: | chr13:56292194-56291772 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 112-564 |
| Cow position: | chr13:39930620-39931074 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 75, 81 |
Show alignments to all cow chromosomes.