Cow genome map

Conread name: Ss1.1-Pig4-TMW8042B01.3

Conread position: 1-315
Cow position:
Alignm length: 315
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-348
Cow position:
Alignm length: 358
Alignm identity: 228
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 266, 298

Conread position: 1-353
Cow position:
Alignm length: 355
Alignm identity: 229
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 178, 186

Conread position: 1-366
Cow position:
Alignm length: 366
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 353, 0

Conread position: 1-371
Cow position:
Alignm length: 371
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 1-395
Cow position:
Alignm length: 399
Alignm identity: 245
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 265, 286

Conread position: 1-420
Cow position:
Alignm length: 422
Alignm identity: 254
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 278, 285

Conread position: 1-470
Cow position:
Alignm length: 473
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 191

Conread position: 1-511
Cow position:
Alignm length: 519
Alignm identity: 324
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 5, 21

Conread position: 1-512
Cow position:
Alignm length: 512
Alignm identity: 304
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-512
Cow position:
Alignm length: 516
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 20

Conread position: 1-512
Cow position:
Alignm length: 517
Alignm identity: 323
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 126, 6

Conread position: 1-512
Cow position:
Alignm length: 515
Alignm identity: 310
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 25

Conread position: 1-513
Cow position:
Alignm length: 516
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 337

Conread position: 1-514
Cow position:
Alignm length: 516
Alignm identity: 295
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 360, 353

Conread position: 1-514
Cow position:
Alignm length: 514
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-514
Cow position:
Alignm length: 517
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 1-515
Cow position:
Alignm length: 517
Alignm identity: 315
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 21

Conread position: 1-515
Cow position:
Alignm length: 522
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 1-515
Cow position:
Alignm length: 515
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-515
Cow position:
Alignm length: 516
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 290

Conread position: 1-515
Cow position:
Alignm length: 520
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 116

Conread position: 1-515
Cow position:
Alignm length: 520
Alignm identity: 323
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 129, 103

Conread position: 1-515
Cow position:
Alignm length: 518
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 114

Conread position: 1-515
Cow position:
Alignm length: 520
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 106

Conread position: 1-515
Cow position:
Alignm length: 519
Alignm identity: 305
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 107

Conread position: 1-515
Cow position:
Alignm length: 517
Alignm identity: 306
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 101, 117

Conread position: 1-516
Cow position:
Alignm length: 517
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 83

Conread position: 1-516
Cow position:
Alignm length: 518
Alignm identity: 317
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 241, 247

Conread position: 1-516
Cow position:
Alignm length: 518
Alignm identity: 313
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 106, 124

Conread position: 1-516
Cow position:
Alignm length: 516
Alignm identity: 295
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-517
Cow position:
Alignm length: 519
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 118

Conread position: 1-518
Cow position:
Alignm length: 521
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 36

Conread position: 1-524
Cow position:
Alignm length: 526
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 116

Conread position: 1-531
Cow position:
Alignm length: 532
Alignm identity: 324
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 466, 456

Conread position: 1-551
Cow position:
Alignm length: 555
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 98

Conread position: 1-552
Cow position:
Alignm length: 558
Alignm identity: 337
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 124, 130

Conread position: 1-553
Cow position:
Alignm length: 556
Alignm identity: 330
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 105, 112

Conread position: 1-553
Cow position:
Alignm length: 555
Alignm identity: 339
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 202, 189

Conread position: 1-553
Cow position:
Alignm length: 555
Alignm identity: 331
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 106, 112

Conread position: 1-554
Cow position:
Alignm length: 559
Alignm identity: 343
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 261, 83

Conread position: 1-554
Cow position:
Alignm length: 559
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 262

Conread position: 1-564
Cow position:
Alignm length: 569
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 112

Conread position: 1-564
Cow position:
Alignm length: 566
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 549, 0

Conread position: 1-565
Cow position:
Alignm length: 570
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 94

Conread position: 1-570
Cow position:
Alignm length: 578
Alignm identity: 348
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 47

Conread position: 1-570
Cow position:
Alignm length: 576
Alignm identity: 354
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 129, 106

Conread position: 1-570
Cow position:
Alignm length: 575
Alignm identity: 349
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 118, 103

Conread position: 1-571
Cow position:
Alignm length: 573
Alignm identity: 345
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 543, 311

Conread position: 1-571
Cow position:
Alignm length: 575
Alignm identity: 336
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 107, 118

Conread position: 2-542
Cow position:
Alignm length: 545
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 118

Conread position: 4-532
Cow position:
Alignm length: 536
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 106

Conread position: 4-553
Cow position:
Alignm length: 553
Alignm identity: 334
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 183, 190

Conread position: 4-556
Cow position:
Alignm length: 557
Alignm identity: 320
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 18

Conread position: 5-571
Cow position:
Alignm length: 570
Alignm identity: 346
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 463, 458

Conread position: 6-348
Cow position:
Alignm length: 343
Alignm identity: 204
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-391
Cow position:
Alignm length: 387
Alignm identity: 228
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 92

Conread position: 6-515
Cow position:
Alignm length: 514
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 41

Conread position: 6-515
Cow position:
Alignm length: 513
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 41

Conread position: 6-531
Cow position:
Alignm length: 530
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 90

Conread position: 6-531
Cow position:
Alignm length: 530
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 90

Conread position: 7-515
Cow position:
Alignm length: 515
Alignm identity: 316
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 93, 117

Conread position: 7-515
Cow position:
Alignm length: 512
Alignm identity: 315
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 269, 257

Conread position: 7-525
Cow position:
Alignm length: 521
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 92

Conread position: 17-451
Cow position:
Alignm length: 437
Alignm identity: 263
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 81

Conread position: 18-501
Cow position:
Alignm length: 485
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 466

Conread position: 19-516
Cow position:
Alignm length: 499
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 410

Conread position: 19-580
Cow position:
Alignm length: 569
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 63

Conread position: 21-539
Cow position:
Alignm length: 522
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 175

Conread position: 21-551
Cow position:
Alignm length: 535
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 96

Conread position: 21-551
Cow position:
Alignm length: 534
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 77

Conread position: 24-516
Cow position:
Alignm length: 496
Alignm identity: 308
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 68, 59

Conread position: 25-513
Cow position:
Alignm length: 492
Alignm identity: 297
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 174, 151

Conread position: 25-542
Cow position:
Alignm length: 521
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 92

Conread position: 25-551
Cow position:
Alignm length: 531
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 88

Conread position: 25-551
Cow position:
Alignm length: 531
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 77

Conread position: 25-553
Cow position:
Alignm length: 532
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 85

Conread position: 29-570
Cow position:
Alignm length: 552
Alignm identity: 337
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 67

Conread position: 30-515
Cow position:
Alignm length: 489
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 83

Conread position: 30-566
Cow position:
Alignm length: 541
Alignm identity: 327
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 417, 12

Conread position: 31-515
Cow position:
Alignm length: 486
Alignm identity: 285
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 407, 398

Conread position: 31-515
Cow position:
Alignm length: 488
Alignm identity: 307
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 80, 67

Conread position: 31-516
Cow position:
Alignm length: 488
Alignm identity: 281
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 159, 163

Conread position: 31-516
Cow position:
Alignm length: 486
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 31-525
Cow position:
Alignm length: 499
Alignm identity: 294
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 16, 87

Conread position: 32-516
Cow position:
Alignm length: 487
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 353, 358

Conread position: 32-524
Cow position:
Alignm length: 496
Alignm identity: 309
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 50

Conread position: 33-512
Cow position:
Alignm length: 483
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 157

Conread position: 34-422
Cow position:
Alignm length: 392
Alignm identity: 244
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 94, 69

Conread position: 34-512
Cow position:
Alignm length: 481
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 79

Conread position: 34-514
Cow position:
Alignm length: 484
Alignm identity: 300
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 147, 175

Conread position: 34-514
Cow position:
Alignm length: 483
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 83

Conread position: 34-514
Cow position:
Alignm length: 484
Alignm identity: 284
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 169

Conread position: 34-515
Cow position:
Alignm length: 486
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 78

Conread position: 34-525
Cow position:
Alignm length: 497
Alignm identity: 301
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 90

Conread position: 39-292
Cow position:
Alignm length: 256
Alignm identity: 167
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 43

Conread position: 39-502
Cow position:
Alignm length: 465
Alignm identity: 289
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 70, 76

Conread position: 42-539
Cow position:
Alignm length: 501
Alignm identity: 304
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 139, 150

Conread position: 46-308
Cow position:
Alignm length: 264
Alignm identity: 166
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 72

Conread position: 46-470
Cow position:
Alignm length: 426
Alignm identity: 258
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 58

Conread position: 46-512
Cow position:
Alignm length: 469
Alignm identity: 281
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 58

Conread position: 46-512
Cow position:
Alignm length: 472
Alignm identity: 295
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 62

Conread position: 46-512
Cow position:
Alignm length: 469
Alignm identity: 289
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 83, 57

Conread position: 46-553
Cow position:
Alignm length: 509
Alignm identity: 308
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 73

Conread position: 48-525
Cow position:
Alignm length: 483
Alignm identity: 290
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 64

Conread position: 50-351
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 54, 63

Conread position: 70-564
Cow position:
Alignm length: 498
Alignm identity: 289
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 279, 291

Conread position: 118-558
Cow position:
Alignm length: 443
Alignm identity: 271
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 85, 79

Conread position: 122-542
Cow position:
Alignm length: 422
Alignm identity: 270
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 239, 232

Conread position: 126-578
Cow position:
Alignm length: 459
Alignm identity: 283
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 43

Show alignments to all cow chromosomes.