Cow genome map

Conread name: Ss1.1-Pig4-TMW8042B01.3

Conread position: 1-216
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 154, 142

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 112

Conread position: 1-324
Cow position:
Alignm length: 325
Alignm identity: 211
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 110, 6

Conread position: 1-362
Cow position:
Alignm length: 362
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-363
Cow position:
Alignm length: 366
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 99

Conread position: 1-396
Cow position:
Alignm length: 398
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 99

Conread position: 1-411
Cow position:
Alignm length: 412
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 103

Conread position: 1-435
Cow position:
Alignm length: 436
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1-483
Cow position:
Alignm length: 483
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-514
Cow position:
Alignm length: 515
Alignm identity: 313
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 484, 0

Conread position: 1-514
Cow position:
Alignm length: 518
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 102

Conread position: 1-515
Cow position:
Alignm length: 519
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 9

Conread position: 1-542
Cow position:
Alignm length: 543
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 54

Conread position: 1-550
Cow position:
Alignm length: 553
Alignm identity: 339
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 17

Conread position: 1-552
Cow position:
Alignm length: 553
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 350

Conread position: 1-553
Cow position:
Alignm length: 553
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 0

Conread position: 1-554
Cow position:
Alignm length: 554
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-564
Cow position:
Alignm length: 569
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 99

Conread position: 1-566
Cow position:
Alignm length: 584
Alignm identity: 357
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 110, 98

Conread position: 1-576
Cow position:
Alignm length: 580
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 546, 542

Conread position: 3-570
Cow position:
Alignm length: 573
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 110

Conread position: 7-322
Cow position:
Alignm length: 317
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 93

Conread position: 7-515
Cow position:
Alignm length: 511
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 67

Conread position: 7-551
Cow position:
Alignm length: 548
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 124

Conread position: 17-553
Cow position:
Alignm length: 540
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 105

Conread position: 19-260
Cow position:
Alignm length: 244
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 63

Conread position: 24-552
Cow position:
Alignm length: 529
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 24-564
Cow position:
Alignm length: 545
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 170

Conread position: 25-483
Cow position:
Alignm length: 462
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 172

Conread position: 25-492
Cow position:
Alignm length: 472
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 79

Conread position: 25-551
Cow position:
Alignm length: 529
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 72

Conread position: 25-553
Cow position:
Alignm length: 532
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 401

Conread position: 34-542
Cow position:
Alignm length: 514
Alignm identity: 318
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 287, 266

Conread position: 34-554
Cow position:
Alignm length: 524
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 79

Conread position: 41-553
Cow position:
Alignm length: 517
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 58

Conread position: 48-498
Cow position:
Alignm length: 451
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 0

Conread position: 48-512
Cow position:
Alignm length: 469
Alignm identity: 292
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 38, 47

Conread position: 48-569
Cow position:
Alignm length: 526
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 69

Conread position: 54-564
Cow position:
Alignm length: 516
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 69-388
Cow position:
Alignm length: 321
Alignm identity: 213
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 40, 35

Conread position: 70-513
Cow position:
Alignm length: 444
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 74-490
Cow position:
Alignm length: 422
Alignm identity: 278
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 10

Conread position: 119-571
Cow position:
Alignm length: 464
Alignm identity: 298
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 34, 73

Conread position: 134-525
Cow position:
Alignm length: 393
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 295

Conread position: 134-558
Cow position:
Alignm length: 427
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 138-551
Cow position:
Alignm length: 419
Alignm identity: 265
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 23

Conread position: 138-553
Cow position:
Alignm length: 416
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 142-552
Cow position:
Alignm length: 413
Alignm identity: 267
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 13, 22

Conread position: 147-516
Cow position:
Alignm length: 373
Alignm identity: 237
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 286, 292

Conread position: 150-553
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 154-542
Cow position:
Alignm length: 390
Alignm identity: 245
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 282, 292

Conread position: 158-571
Cow position:
Alignm length: 417
Alignm identity: 264
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 145, 153

Conread position: 192-515
Cow position:
Alignm length: 325
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 77

Conread position: 193-540
Cow position:
Alignm length: 348
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 238-576
Cow position:
Alignm length: 345
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 29

Conread position: 301-558
Cow position:
Alignm length: 259
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 22

Show alignments to all cow chromosomes.