Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042B01.3 |
| Conread position: | 1-184 |
| Cow position: | chr24:16986460-16986643 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-313 |
| Cow position: | chr24:17013194-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-396 |
| Cow position: | chr24:17070657-17071052 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 103 |
| Conread position: | 1-409 |
| Cow position: | chr24:17077895-17077488 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 1-475 |
| Cow position: | chr24:17070573-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 107 |
| Conread position: | 1-514 |
| Cow position: | chr24:17078147-17077634 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 103 |
| Conread position: | 1-515 |
| Cow position: | chr24:17035676-17035162 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 107 |
| Conread position: | 1-525 |
| Cow position: | chr24:17070489-17071013 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 100 |
| Conread position: | 1-542 |
| Cow position: | chr24:17035760-17035219 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 196 |
| Conread position: | 1-553 |
| Cow position: | chr24:17035844-17035292 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 81 |
| Conread position: | 1-553 |
| Cow position: | chr24:17036096-17035544 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 103 |
| Conread position: | 1-553 |
| Cow position: | chr24:17078063-17077511 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 124 |
| Conread position: | 1-566 |
| Cow position: | chr24:17036348-17035781 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 103 |
| Conread position: | 3-316 |
| Cow position: | chr24:17070743-17071056 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 3-347 |
| Cow position: | chr24:17035422-17035078 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 83, 79 |
| Conread position: | 7-552 |
| Cow position: | chr24:17036006-17035461 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 97 |
| Conread position: | 7-557 |
| Cow position: | chr24:17035586-17035036 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 97 |
| Conread position: | 7-565 |
| Cow position: | chr24:17036258-17035697 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 538, 0 |
| Conread position: | 7-576 |
| Cow position: | chr24:17036426-17035854 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 106 |
| Conread position: | 7-591 |
| Cow position: | chr24:17036174-17035585 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 97 |
| Conread position: | 19-576 |
| Cow position: | chr24:17036498-17035938 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 85 |
| Conread position: | 23-566 |
| Cow position: | chr24:17070428-17070972 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 11 |
| Conread position: | 25-592 |
| Cow position: | chr24:17036573-17036004 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 34-566 |
| Cow position: | chr24:17070353-17070888 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 40-353 |
| Cow position: | chr24:17013149-17013462 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 106-367 |
| Cow position: | chr24:16986398-16986658 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 123-501 |
| Cow position: | chr24:17013148-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 0 |
| Conread position: | 123-554 |
| Cow position: | chr24:17078109-17077678 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 208-553 |
| Cow position: | chr24:17013149-17013494 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 153, 140 |
Show alignments to all cow chromosomes.