Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8042B01.3
        

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               101, 112
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               83, 95
               

               Conread position:
               1-300
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               87, 6
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               87, 6
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               289, 9
               

               Conread position:
               1-353
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 15
               

               Conread position:
               1-395
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               104, 125
               

               Conread position:
               1-396
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 103
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-512
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 103
               

               Conread position:
               1-513
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               1-513
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               321
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               1-542
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 194
               

               Conread position:
               1-547
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 193
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               520, 516
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               345, 95
               

               Conread position:
               1-553
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 133
               

               Conread position:
               1-553
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 116
               

               Conread position:
               1-553
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               360, 353
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               540, 0
               

               Conread position:
               1-564
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 29
               

               Conread position:
               1-570
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               438, 424
               

               Conread position:
               1-571
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 103
               

               Conread position:
               1-575
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               552, 0
               

               Conread position:
               1-576
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 103
               

               Conread position:
               1-580
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 102
               

               Conread position:
               2-570
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               3-539
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               437, 444
               

               Conread position:
               3-569
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               4-515
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               4-541
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-509
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               317
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               104, 95
               

               Conread position:
               5-570
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               550, 0
               

               Conread position:
               6-542
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               236, 276
               

               Conread position:
               7-425
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               114, 121
               

               Conread position:
               7-515
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               7-566
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               530, 520
               

               Conread position:
               17-351
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               135, 183
               

               Conread position:
               17-515
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               300
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               18-553
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 174
               

               Conread position:
               19-344
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 84
               

               Conread position:
               19-542
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 85
               

               Conread position:
               19-557
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 180
               

               Conread position:
               19-566
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 85
               

               Conread position:
               19-604
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               369
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               24-263
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               24-525
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               329, 336
               

               Conread position:
               25-227
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 174
               

               Conread position:
               25-575
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 245
               

               Conread position:
               30-577
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 21
               

               Conread position:
               33-503
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               33-556
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               318
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               33-564
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               34-313
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 61
               

               Conread position:
               34-479
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               55, 63
               

               Conread position:
               34-506
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               34-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               231, 248
               

               Conread position:
               34-557
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 69
               

               Conread position:
               34-564
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 327
               

               Conread position:
               45-553
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 158
               

               Conread position:
               48-537
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               40, 47
               

               Conread position:
               51-542
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               308
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               55-259
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               63, 49
               

               Conread position:
               55-553
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 80
               

               Conread position:
               55-560
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               77-389
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               203, 210
               

               Conread position:
               77-553
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               108-553
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               331, 321
               

               Conread position:
               119-542
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               123-554
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               176, 160
               

               Conread position:
               136-512
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               171, 165
               

               Conread position:
               136-512
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               136-553
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 297
               

               Conread position:
               138-461
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               110, 104
               

               Conread position:
               138-552
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               187, 193
               

               Conread position:
               156-585
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 276
               

               Conread position:
               158-552
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               23, 55
               

               Conread position:
               163-481
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               190-433
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               241, 0
               

               Conread position:
               200-553
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               212-553
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-564
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               88, 81
               

               Conread position:
               223-541
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-569
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               318, 0
               

               Conread position:
               286-564
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               257, 0
               

               Conread position:
               297-564
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               119, 113
               
Show alignments to all cow chromosomes.