Cow genome map
Conread name: | Ss1.1-Pig4-TMW8042B01.3 |
Conread position: | 1-228 |
Cow position: | chr25:34769422-34769195 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 160 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 101, 112 |
Conread position: | 1-248 |
Cow position: | chr25:34732074-34731827 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 162 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 83, 95 |
Conread position: | 1-300 |
Cow position: | chr25:366756-367054 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 199 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 87, 6 |
Conread position: | 1-312 |
Cow position: | chr25:33145128-33145439 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 205 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 13, 21 |
Conread position: | 1-325 |
Cow position: | chr25:346479-346802 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 208 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 87, 6 |
Conread position: | 1-341 |
Cow position: | chr25:414744-414411 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 220 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 289, 9 |
Conread position: | 1-353 |
Cow position: | chr25:22235944-22236295 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 216 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 15 |
Conread position: | 1-395 |
Cow position: | chr25:36801573-36801967 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 248 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 104, 125 |
Conread position: | 1-396 |
Cow position: | chr25:34433635-34434027 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 244 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 110, 103 |
Conread position: | 1-409 |
Cow position: | chr25:33127832-33128240 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 254 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-476 |
Cow position: | chr25:33127748-33128223 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-512 |
Cow position: | chr25:34447220-34447729 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 103 |
Conread position: | 1-513 |
Cow position: | chr25:33298593-33299105 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 26 |
Conread position: | 1-513 |
Cow position: | chr25:36801249-36801749 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 321 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 19, 11 |
Conread position: | 1-542 |
Cow position: | chr25:23420329-23420870 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 194 |
Conread position: | 1-547 |
Cow position: | chr25:34769842-34769297 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 193 |
Conread position: | 1-551 |
Cow position: | chr25:34769758-34769208 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 520, 516 |
Conread position: | 1-552 |
Cow position: | chr25:33306432-33305887 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 344 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 345, 95 |
Conread position: | 1-553 |
Cow position: | chr25:33144879-33145428 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 133 |
Conread position: | 1-553 |
Cow position: | chr25:34447304-34447847 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 116 |
Conread position: | 1-553 |
Cow position: | chr25:36800745-36801297 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 360, 353 |
Conread position: | 1-557 |
Cow position: | chr25:34769926-34769368 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 540, 0 |
Conread position: | 1-564 |
Cow position: | chr25:33299181-33299746 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 29 |
Conread position: | 1-570 |
Cow position: | chr25:34447052-34447623 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 438, 424 |
Conread position: | 1-571 |
Cow position: | chr25:34770010-34769438 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 103 |
Conread position: | 1-575 |
Cow position: | chr25:33298929-33299506 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 552, 0 |
Conread position: | 1-576 |
Cow position: | chr25:33157359-33156782 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 103 |
Conread position: | 1-580 |
Cow position: | chr25:33298845-33299429 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 102 |
Conread position: | 2-570 |
Cow position: | chr25:36800494-36801064 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 8 |
Conread position: | 3-539 |
Cow position: | chr25:34713898-34714434 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 325 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 437, 444 |
Conread position: | 3-569 |
Cow position: | chr25:36800579-36801148 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 48 |
Conread position: | 4-515 |
Cow position: | chr25:34713983-34714494 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 306 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 42, 26 |
Conread position: | 4-541 |
Cow position: | chr25:34447139-34447676 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-509 |
Cow position: | chr25:33299353-33299853 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 317 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 104, 95 |
Conread position: | 5-570 |
Cow position: | chr25:34770090-34769523 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 550, 0 |
Conread position: | 6-542 |
Cow position: | chr25:34762864-34763397 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 313 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 236, 276 |
Conread position: | 7-425 |
Cow position: | chr25:34714154-34714568 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 266 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 114, 121 |
Conread position: | 7-515 |
Cow position: | chr25:34433725-34434218 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 313 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 42, 34 |
Conread position: | 7-566 |
Cow position: | chr25:34446974-34447535 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 530, 520 |
Conread position: | 17-351 |
Cow position: | chr25:18642209-18641872 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 221 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 135, 183 |
Conread position: | 17-515 |
Cow position: | chr25:34433487-34433978 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 300 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 90, 9 |
Conread position: | 18-553 |
Cow position: | chr25:33157426-33156891 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 174 |
Conread position: | 19-344 |
Cow position: | chr25:33305271-33304949 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 211 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 99, 84 |
Conread position: | 19-542 |
Cow position: | chr25:36801183-36801694 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 313 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 91, 85 |
Conread position: | 19-557 |
Cow position: | chr25:36801423-36801961 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 180 |
Conread position: | 19-566 |
Cow position: | chr25:33299115-33299664 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 85 |
Conread position: | 19-604 |
Cow position: | chr25:33305999-33305415 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 369 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 16, 51 |
Conread position: | 24-263 |
Cow position: | chr25:346585-346824 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 160 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 49, 56 |
Conread position: | 24-525 |
Cow position: | chr25:34732555-34732054 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 295 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 329, 336 |
Conread position: | 25-227 |
Cow position: | chr25:327060-327263 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 139 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 10, 174 |
Conread position: | 25-575 |
Cow position: | chr25:33298785-33299338 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 245 |
Conread position: | 30-577 |
Cow position: | chr25:33305425-33304882 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 21 |
Conread position: | 33-503 |
Cow position: | chr25:326643-327119 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 295 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 65, 49 |
Conread position: | 33-556 |
Cow position: | chr25:326727-327258 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 318 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 64, 75 |
Conread position: | 33-564 |
Cow position: | chr25:33298541-33299074 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 34-313 |
Cow position: | chr25:326986-327265 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 180 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 49, 61 |
Conread position: | 34-479 |
Cow position: | chr25:22235892-22236337 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 270 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 55, 63 |
Conread position: | 34-506 |
Cow position: | chr25:36800694-36801166 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 34-554 |
Cow position: | chr25:34763225-34763742 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 309 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 231, 248 |
Conread position: | 34-557 |
Cow position: | chr25:33299298-33299821 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 69 |
Conread position: | 34-564 |
Cow position: | chr25:33298710-33299242 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 317, 327 |
Conread position: | 45-553 |
Cow position: | chr25:33127708-33128216 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 158 |
Conread position: | 48-537 |
Cow position: | chr25:34732615-34732127 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 302 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 40, 47 |
Conread position: | 51-542 |
Cow position: | chr25:34446934-34447425 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 308 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 55, 62 |
Conread position: | 55-259 |
Cow position: | chr25:34433020-34433224 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 142 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 63, 49 |
Conread position: | 55-553 |
Cow position: | chr25:33298479-33298977 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 80 |
Conread position: | 55-560 |
Cow position: | chr25:36800463-36800970 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 315 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 27, 32 |
Conread position: | 77-389 |
Cow position: | chr25:346470-346782 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 192 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 203, 210 |
Conread position: | 77-553 |
Cow position: | chr25:23420321-23420797 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 27 |
Conread position: | 108-553 |
Cow position: | chr25:34446907-34447352 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 321 |
Conread position: | 119-542 |
Cow position: | chr25:34770146-34769721 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 123-554 |
Cow position: | chr25:34713850-34714281 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 256 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 176, 160 |
Conread position: | 136-512 |
Cow position: | chr25:33144846-33145220 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 231 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 171, 165 |
Conread position: | 136-512 |
Cow position: | chr25:34732611-34732235 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 239 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 136-553 |
Cow position: | chr25:33157476-33157059 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 297 |
Conread position: | 138-461 |
Cow position: | chr25:366724-367047 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 205 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 110, 104 |
Conread position: | 138-552 |
Cow position: | chr25:346447-346861 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 244 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 187, 193 |
Conread position: | 156-585 |
Cow position: | chr25:23420316-23420750 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 284, 276 |
Conread position: | 158-552 |
Cow position: | chr25:34446873-34447267 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 244 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 23, 55 |
Conread position: | 163-481 |
Cow position: | chr25:326947-327265 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 192 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 190-433 |
Cow position: | chr25:34432987-34433231 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 160 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 241, 0 |
Conread position: | 200-553 |
Cow position: | chr25:34770147-34769794 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 228 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 212-553 |
Cow position: | chr25:33127707-33128048 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 214 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 222-564 |
Cow position: | chr25:33298478-33298822 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 212 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 88, 81 |
Conread position: | 223-541 |
Cow position: | chr25:366725-367043 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 207 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 223-569 |
Cow position: | chr25:346448-346796 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 215 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 318, 0 |
Conread position: | 286-564 |
Cow position: | chr25:33157494-33157214 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 177 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 257, 0 |
Conread position: | 297-564 |
Cow position: | chr25:33298469-33298738 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 182 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 119, 113 |
Show alignments to all cow chromosomes.