Cow genome map

Conread name: Ss1.1-Pig4-TMW8042B01.3

Conread position: 1-238
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 19

Conread position: 1-299
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 83, 6

Conread position: 1-310
Cow position:
Alignm length: 313
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 102

Conread position: 1-411
Cow position:
Alignm length: 414
Alignm identity: 268
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 108, 97

Conread position: 1-494
Cow position:
Alignm length: 497
Alignm identity: 303
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 63

Conread position: 1-514
Cow position:
Alignm length: 515
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 0

Conread position: 1-525
Cow position:
Alignm length: 531
Alignm identity: 329
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 21

Conread position: 1-551
Cow position:
Alignm length: 553
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 102

Conread position: 6-353
Cow position:
Alignm length: 351
Alignm identity: 220
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 76

Conread position: 6-365
Cow position:
Alignm length: 362
Alignm identity: 226
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 181, 186

Conread position: 7-553
Cow position:
Alignm length: 549
Alignm identity: 321
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 102

Conread position: 18-565
Cow position:
Alignm length: 553
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 130

Conread position: 19-469
Cow position:
Alignm length: 452
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 85

Conread position: 19-558
Cow position:
Alignm length: 542
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 73

Conread position: 19-565
Cow position:
Alignm length: 552
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 224

Conread position: 19-576
Cow position:
Alignm length: 563
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 86

Conread position: 24-552
Cow position:
Alignm length: 539
Alignm identity: 325
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 86, 80

Conread position: 25-339
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 78

Conread position: 25-551
Cow position:
Alignm length: 527
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-558
Cow position:
Alignm length: 535
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 88

Conread position: 25-566
Cow position:
Alignm length: 546
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 79

Conread position: 26-566
Cow position:
Alignm length: 545
Alignm identity: 320
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 158, 20

Conread position: 26-580
Cow position:
Alignm length: 560
Alignm identity: 327
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 70

Conread position: 30-460
Cow position:
Alignm length: 436
Alignm identity: 271
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 148, 169

Conread position: 31-599
Cow position:
Alignm length: 575
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 394

Conread position: 33-353
Cow position:
Alignm length: 323
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 151, 170

Conread position: 34-353
Cow position:
Alignm length: 323
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 60

Conread position: 34-501
Cow position:
Alignm length: 469
Alignm identity: 285
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 229, 208

Conread position: 34-507
Cow position:
Alignm length: 475
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 70

Conread position: 34-514
Cow position:
Alignm length: 487
Alignm identity: 300
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 85

Conread position: 34-553
Cow position:
Alignm length: 523
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 69

Conread position: 34-561
Cow position:
Alignm length: 533
Alignm identity: 323
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 265, 260

Conread position: 34-564
Cow position:
Alignm length: 535
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 70

Conread position: 36-351
Cow position:
Alignm length: 319
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 38

Conread position: 36-553
Cow position:
Alignm length: 519
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 468

Conread position: 46-434
Cow position:
Alignm length: 392
Alignm identity: 236
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 48

Conread position: 46-557
Cow position:
Alignm length: 518
Alignm identity: 330
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 140, 24

Conread position: 47-574
Cow position:
Alignm length: 535
Alignm identity: 322
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 77, 36

Conread position: 51-362
Cow position:
Alignm length: 314
Alignm identity: 203
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 5, 44

Conread position: 51-551
Cow position:
Alignm length: 507
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 17

Conread position: 51-561
Cow position:
Alignm length: 515
Alignm identity: 319
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 145, 149

Conread position: 53-508
Cow position:
Alignm length: 461
Alignm identity: 281
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 37, 31

Conread position: 57-566
Cow position:
Alignm length: 514
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 460

Conread position: 74-539
Cow position:
Alignm length: 468
Alignm identity: 301
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 29

Conread position: 116-557
Cow position:
Alignm length: 449
Alignm identity: 280
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 230, 64

Conread position: 122-515
Cow position:
Alignm length: 402
Alignm identity: 257
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 69, 26

Conread position: 137-515
Cow position:
Alignm length: 383
Alignm identity: 239
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 218, 226

Conread position: 214-574
Cow position:
Alignm length: 366
Alignm identity: 236
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 151, 24

Conread position: 223-571
Cow position:
Alignm length: 352
Alignm identity: 216
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 321, 0

Show alignments to all cow chromosomes.