Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042B01.3 |
| Conread position: | 1-470 |
| Cow position: | chr3:62722043-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 97 |
| Conread position: | 1-483 |
| Cow position: | chr3:62742560-62743033 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 84 |
| Conread position: | 1-500 |
| Cow position: | chr3:62743043-62743534 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 319 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 413, 74 |
| Conread position: | 1-515 |
| Cow position: | chr3:68045631-68046145 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 1-516 |
| Cow position: | chr3:68027038-68027553 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 1-542 |
| Cow position: | chr3:62742392-62742929 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 338 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 91, 82 |
| Conread position: | 1-553 |
| Cow position: | chr3:62722127-62721575 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-560 |
| Cow position: | chr3:68027122-68027683 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 99 |
| Conread position: | 1-564 |
| Cow position: | chr3:62722295-62721730 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 439, 435 |
| Conread position: | 1-584 |
| Cow position: | chr3:68027206-68027789 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-863 |
| Cow position: | chr3:68045799-68046663 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 786 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 735, 789 |
| Conread position: | 4-566 |
| Cow position: | chr3:68045718-68046282 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 113 |
| Conread position: | 7-533 |
| Cow position: | chr3:62742482-62743004 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 97 |
| Conread position: | 15-564 |
| Cow position: | chr3:62742238-62742784 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 17-554 |
| Cow position: | chr3:77351193-77350668 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 13 |
| Conread position: | 19-309 |
| Cow position: | chr3:62721857-62721567 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 85, 97 |
| Conread position: | 20-554 |
| Cow position: | chr3:62742911-62743423 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 84 |
| Conread position: | 25-577 |
| Cow position: | chr3:62722187-62721632 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 519, 0 |
| Conread position: | 26-542 |
| Cow position: | chr3:68026982-68027495 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 26-551 |
| Cow position: | chr3:77351102-77350588 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 332 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 483, 67 |
| Conread position: | 45-345 |
| Cow position: | chr3:16020466-16020177 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 77-522 |
| Cow position: | chr3:62743035-62743475 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 108-565 |
| Cow position: | chr3:62722356-62721896 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 109-512 |
| Cow position: | chr3:68026978-68027381 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 263 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 337, 327 |
| Conread position: | 129-385 |
| Cow position: | chr3:16020466-16020217 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 137-564 |
| Cow position: | chr3:68045599-68046028 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 302, 309 |
| Conread position: | 140-515 |
| Cow position: | chr3:68026927-68027300 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 191-521 |
| Cow position: | chr3:68045569-68045899 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.