Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042B01.3 |
| Conread position: | 1-338 |
| Cow position: | chr6:49396575-49396912 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 1-515 |
| Cow position: | chr6:49396077-49396585 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 93 |
| Conread position: | 1-515 |
| Cow position: | chr6:49396323-49396837 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 91 |
| Conread position: | 1-535 |
| Cow position: | chr6:49340938-49341470 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 113 |
| Conread position: | 1-560 |
| Cow position: | chr6:49340518-49341079 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 113 |
| Conread position: | 1-564 |
| Cow position: | chr6:49340602-49341167 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 1-576 |
| Cow position: | chr6:49340685-49341264 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 6-492 |
| Cow position: | chr6:49396166-49396646 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 6-525 |
| Cow position: | chr6:49396412-49396931 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 96, 113 |
| Conread position: | 7-506 |
| Cow position: | chr6:49396497-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 293 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 103, 112 |
| Conread position: | 17-603 |
| Cow position: | chr6:49340366-49340954 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 102 |
| Conread position: | 34-395 |
| Cow position: | chr6:49429131-49429492 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 214, 208 |
| Conread position: | 34-565 |
| Cow position: | chr6:49340887-49341421 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 84 |
| Conread position: | 46-542 |
| Cow position: | chr6:49428975-49429471 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-564 |
| Cow position: | chr6:49340342-49340831 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 24 |
Show alignments to all cow chromosomes.