Cow genome map

Conread name: Ss1.1-Pig4-TMW8042B01.3

Conread position: 1-346
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 249

Conread position: 1-396
Cow position:
Alignm length: 397
Alignm identity: 254
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 103, 112

Conread position: 1-423
Cow position:
Alignm length: 425
Alignm identity: 257
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 112

Conread position: 1-430
Cow position:
Alignm length: 433
Alignm identity: 273
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 43

Conread position: 1-498
Cow position:
Alignm length: 501
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 109

Conread position: 1-503
Cow position:
Alignm length: 506
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 102

Conread position: 1-507
Cow position:
Alignm length: 509
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 131

Conread position: 1-514
Cow position:
Alignm length: 515
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 193

Conread position: 1-524
Cow position:
Alignm length: 524
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-547
Cow position:
Alignm length: 548
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 102

Conread position: 1-551
Cow position:
Alignm length: 555
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 107

Conread position: 1-553
Cow position:
Alignm length: 555
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 93

Conread position: 1-560
Cow position:
Alignm length: 564
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 1-560
Cow position:
Alignm length: 562
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 543, 558

Conread position: 1-560
Cow position:
Alignm length: 564
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 63

Conread position: 1-565
Cow position:
Alignm length: 570
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 373

Conread position: 1-566
Cow position:
Alignm length: 570
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 115

Conread position: 1-566
Cow position:
Alignm length: 569
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 519, 514

Conread position: 1-569
Cow position:
Alignm length: 577
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 118

Conread position: 1-571
Cow position:
Alignm length: 576
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 6

Conread position: 1-571
Cow position:
Alignm length: 574
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 103

Conread position: 1-586
Cow position:
Alignm length: 593
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 543, 0

Conread position: 2-423
Cow position:
Alignm length: 423
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 101

Conread position: 5-547
Cow position:
Alignm length: 544
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 99

Conread position: 6-551
Cow position:
Alignm length: 549
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 102

Conread position: 6-553
Cow position:
Alignm length: 551
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 188

Conread position: 17-566
Cow position:
Alignm length: 553
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 333

Conread position: 19-564
Cow position:
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 80

Conread position: 19-576
Cow position:
Alignm length: 565
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 77

Conread position: 21-548
Cow position:
Alignm length: 533
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 10

Conread position: 25-565
Cow position:
Alignm length: 545
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 75

Conread position: 30-553
Cow position:
Alignm length: 527
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 81

Conread position: 33-565
Cow position:
Alignm length: 538
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 158

Conread position: 34-565
Cow position:
Alignm length: 536
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 69

Conread position: 34-565
Cow position:
Alignm length: 535
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 510, 0

Conread position: 34-566
Cow position:
Alignm length: 539
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 253

Conread position: 34-577
Cow position:
Alignm length: 545
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 525, 501

Conread position: 37-551
Cow position:
Alignm length: 520
Alignm identity: 320
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 25, 160

Conread position: 41-502
Cow position:
Alignm length: 466
Alignm identity: 290
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 7, 66

Conread position: 54-553
Cow position:
Alignm length: 501
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 457

Conread position: 77-507
Cow position:
Alignm length: 433
Alignm identity: 262
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 362, 273

Conread position: 123-591
Cow position:
Alignm length: 476
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 46

Conread position: 128-567
Cow position:
Alignm length: 448
Alignm identity: 285
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 95, 157

Conread position: 138-569
Cow position:
Alignm length: 442
Alignm identity: 282
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 51

Conread position: 148-506
Cow position:
Alignm length: 363
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 47

Conread position: 241-512
Cow position:
Alignm length: 272
Alignm identity: 171
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.