Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042B01.3 |
| Conread position: | 1-346 |
| Cow position: | chr8:46816999-46817344 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 249 |
| Conread position: | 1-396 |
| Cow position: | chr8:48406676-48406281 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 103, 112 |
| Conread position: | 1-423 |
| Cow position: | chr8:6958050-6957629 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 101, 112 |
| Conread position: | 1-430 |
| Cow position: | chr8:46816915-46817344 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 43 |
| Conread position: | 1-498 |
| Cow position: | chr8:48407264-48406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 109 |
| Conread position: | 1-503 |
| Cow position: | chr8:45201636-45202130 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 102 |
| Conread position: | 1-507 |
| Cow position: | chr8:48406844-48406338 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 131 |
| Conread position: | 1-514 |
| Cow position: | chr8:46816411-46816924 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 193 |
| Conread position: | 1-524 |
| Cow position: | chr8:55581188-55581711 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-547 |
| Cow position: | chr8:45201384-45201929 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 102 |
| Conread position: | 1-551 |
| Cow position: | chr8:46816747-46817297 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 107 |
| Conread position: | 1-553 |
| Cow position: | chr8:48407432-48406880 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 93 |
| Conread position: | 1-560 |
| Cow position: | chr8:45200964-45201524 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 1-560 |
| Cow position: | chr8:45201048-45201608 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 558 |
| Conread position: | 1-560 |
| Cow position: | chr8:55580768-55581329 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 63 |
| Conread position: | 1-565 |
| Cow position: | chr8:46816579-46817146 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 373 |
| Conread position: | 1-566 |
| Cow position: | chr8:46816159-46816726 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 115 |
| Conread position: | 1-566 |
| Cow position: | chr8:55580936-55581503 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 519, 514 |
| Conread position: | 1-569 |
| Cow position: | chr8:46816663-46817233 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 118 |
| Conread position: | 1-571 |
| Cow position: | chr8:48406927-48406356 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 6 |
| Conread position: | 1-571 |
| Cow position: | chr8:55580852-55581424 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 103 |
| Conread position: | 1-586 |
| Cow position: | chr8:45201300-45201892 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 543, 0 |
| Conread position: | 2-423 |
| Cow position: | chr8:45201553-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 101 |
| Conread position: | 5-547 |
| Cow position: | chr8:55581108-55581649 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 99 |
| Conread position: | 6-551 |
| Cow position: | chr8:46816332-46816877 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 102 |
| Conread position: | 6-553 |
| Cow position: | chr8:48407343-48406796 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 188 |
| Conread position: | 17-566 |
| Cow position: | chr8:48407500-48406949 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 333 |
| Conread position: | 19-564 |
| Cow position: | chr8:46816093-46816640 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 80 |
| Conread position: | 19-576 |
| Cow position: | chr8:45200898-45201458 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 77 |
| Conread position: | 21-548 |
| Cow position: | chr8:46816853-46817377 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 25-565 |
| Cow position: | chr8:55581044-55581587 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 75 |
| Conread position: | 30-553 |
| Cow position: | chr8:48407571-48407048 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 81 |
| Conread position: | 33-565 |
| Cow position: | chr8:46816275-46816810 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 158 |
| Conread position: | 34-565 |
| Cow position: | chr8:45201165-45201699 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 69 |
| Conread position: | 34-565 |
| Cow position: | chr8:45201249-45201783 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 510, 0 |
| Conread position: | 34-566 |
| Cow position: | chr8:46816528-46817062 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 253 |
| Conread position: | 34-577 |
| Cow position: | chr8:45201501-45202040 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 525, 501 |
| Conread position: | 37-551 |
| Cow position: | chr8:46815940-46816457 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 320 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 25, 160 |
| Conread position: | 41-502 |
| Cow position: | chr8:48406721-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 7, 66 |
| Conread position: | 54-553 |
| Cow position: | chr8:48407631-48407132 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 449, 457 |
| Conread position: | 77-507 |
| Cow position: | chr8:6958058-6957629 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 362, 273 |
| Conread position: | 123-591 |
| Cow position: | chr8:48407646-48407173 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 46 |
| Conread position: | 128-567 |
| Cow position: | chr8:46815863-46816308 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 95, 157 |
| Conread position: | 138-569 |
| Cow position: | chr8:55580736-55581170 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 148-506 |
| Cow position: | chr8:6958072-6957714 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 241-512 |
| Cow position: | chr8:6958062-6957791 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.