Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 65-366 |
| Cow position: | chr13:19141231-19141535 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 104-366 |
| Cow position: | chr13:38611956-38612221 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 137 |
| Conread position: | 104-379 |
| Cow position: | chr13:3021753-3021473 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr13:3657618-3657338 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr13:53157657-53157377 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 106-366 |
| Cow position: | chr13:43120815-43120552 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 135 |
| Conread position: | 107-366 |
| Cow position: | chr13:41567447-41567181 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 39, 43 |
| Conread position: | 115-366 |
| Cow position: | chr13:34345048-34345301 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 8 |
| Conread position: | 117-366 |
| Cow position: | chr13:7608892-7609142 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 120-366 |
| Cow position: | chr13:13902605-13902853 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 121 |
| Conread position: | 153-387 |
| Cow position: | chr13:24289575-24289348 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 368-600 |
| Cow position: | chr13:831253-831026 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 162, 31 |
| Conread position: | 369-624 |
| Cow position: | chr13:22568297-22568035 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 375-526 |
| Cow position: | chr13:10108108-10107960 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 375-544 |
| Cow position: | chr13:35695685-35695859 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 151, 29 |
| Conread position: | 375-591 |
| Cow position: | chr13:21587991-21588206 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 375-626 |
| Cow position: | chr13:6138664-6138408 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 158, 142 |
| Conread position: | 375-648 |
| Cow position: | chr13:54899804-54900080 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 76, 54 |
| Conread position: | 375-750 |
| Cow position: | chr13:54068381-54068763 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 189, 42 |
| Conread position: | 381-749 |
| Cow position: | chr13:28549860-28550227 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 383-600 |
| Cow position: | chr13:13289528-13289309 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 142, 200 |
| Conread position: | 389-734 |
| Cow position: | chr13:32182986-32183336 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 131, 18 |
| Conread position: | 389-745 |
| Cow position: | chr13:17378150-17378517 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 101 |
| Conread position: | 390-603 |
| Cow position: | chr13:6900475-6900262 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 41 |
| Conread position: | 392-603 |
| Cow position: | chr13:3150249-3150039 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 97 |
| Conread position: | 396-750 |
| Cow position: | chr13:49675759-49675397 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 134, 160 |
| Conread position: | 398-713 |
| Cow position: | chr13:15296299-15296628 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 130, 170 |
| Conread position: | 400-745 |
| Cow position: | chr13:39393835-39393492 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 128, 97 |
| Conread position: | 437-750 |
| Cow position: | chr13:5329013-5329335 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 91, 123 |
Show alignments to all cow chromosomes.