Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 104-366 |
| Cow position: | chr15:4388353-4388618 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 104-366 |
| Cow position: | chr15:5640985-5640720 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 104-366 |
| Cow position: | chr15:36356458-36356198 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 104-366 |
| Cow position: | chr15:44666605-44666340 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 92 |
| Conread position: | 104-379 |
| Cow position: | chr15:4140303-4140023 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr15:25069888-25069608 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr15:42944000-42943720 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 106-356 |
| Cow position: | chr15:30474106-30473858 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 177, 66 |
| Conread position: | 117-363 |
| Cow position: | chr15:4104142-4103896 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 148-363 |
| Cow position: | chr15:14573653-14573439 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 148-366 |
| Cow position: | chr15:20457977-20458197 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 93 |
| Conread position: | 151-363 |
| Cow position: | chr15:14718476-14718688 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 90 |
| Conread position: | 342-750 |
| Cow position: | chr15:21677482-21677909 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 369-526 |
| Cow position: | chr15:704058-703899 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 369-580 |
| Cow position: | chr15:47899420-47899629 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 62 |
| Conread position: | 369-757 |
| Cow position: | chr15:10770329-10770724 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 114, 163 |
| Conread position: | 373-622 |
| Cow position: | chr15:45868034-45867783 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 375-648 |
| Cow position: | chr15:22561314-22561581 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 375-659 |
| Cow position: | chr15:11684723-11685017 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 145, 170 |
| Conread position: | 375-749 |
| Cow position: | chr15:24639371-24639760 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 185, 42 |
| Conread position: | 376-746 |
| Cow position: | chr15:12962985-12962597 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 381-748 |
| Cow position: | chr15:9038558-9038169 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 147, 316 |
| Conread position: | 383-601 |
| Cow position: | chr15:9390491-9390712 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 145, 165 |
| Conread position: | 383-626 |
| Cow position: | chr15:14411500-14411749 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 390-603 |
| Cow position: | chr15:13135210-13134995 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 193 |
| Conread position: | 390-745 |
| Cow position: | chr15:16342274-16341935 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 205, 56 |
| Conread position: | 395-643 |
| Cow position: | chr15:24648951-24648699 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 62 |
| Conread position: | 395-746 |
| Cow position: | chr15:9046274-9046642 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 86, 194 |
| Conread position: | 397-648 |
| Cow position: | chr15:48288208-48288468 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 92 |
| Conread position: | 398-603 |
| Cow position: | chr15:46639549-46639343 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 127, 122 |
| Conread position: | 403-626 |
| Cow position: | chr15:25660856-25660627 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 65 |
Show alignments to all cow chromosomes.