Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8042E08.3 |
| Conread position: | 104-366 |
| Cow position: | chr19:10613275-10613540 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-370 |
| Cow position: | chr19:15070358-15070628 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr19:24734190-24734470 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 104-379 |
| Cow position: | chr19:29393389-29393669 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 107-366 |
| Cow position: | chr19:14157051-14156791 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 95, 143 |
| Conread position: | 117-366 |
| Cow position: | chr19:16478806-16478555 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 117 |
| Conread position: | 148-626 |
| Cow position: | chr19:33675127-33674641 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 308 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 68, 93 |
| Conread position: | 154-368 |
| Cow position: | chr19:28911629-28911846 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 87 |
| Conread position: | 341-622 |
| Cow position: | chr19:15096724-15097006 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 203 |
| Conread position: | 352-626 |
| Cow position: | chr19:8246002-8245724 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 369-600 |
| Cow position: | chr19:22013148-22013379 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 143, 63 |
| Conread position: | 369-631 |
| Cow position: | chr19:39884279-39884011 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 44 |
| Conread position: | 375-626 |
| Cow position: | chr19:7126791-7127043 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 158, 24 |
| Conread position: | 375-728 |
| Cow position: | chr19:33350754-33350389 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 139, 104 |
| Conread position: | 376-535 |
| Cow position: | chr19:1343101-1342943 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 383-603 |
| Cow position: | chr19:36263672-36263453 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 34 |
| Conread position: | 385-761 |
| Cow position: | chr19:32370282-32369896 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 230, 71 |
| Conread position: | 390-599 |
| Cow position: | chr19:28938318-28938103 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 390-744 |
| Cow position: | chr19:30722173-30721816 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 82, 56 |
| Conread position: | 391-750 |
| Cow position: | chr19:35538913-35538537 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 98 |
| Conread position: | 391-764 |
| Cow position: | chr19:32496349-32495984 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 395-600 |
| Cow position: | chr19:36037446-36037645 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 397-744 |
| Cow position: | chr19:19444797-19444447 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 123, 37 |
| Conread position: | 400-604 |
| Cow position: | chr19:5630619-5630416 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 192, 60 |
Show alignments to all cow chromosomes.